RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 H7C423 109 aa9.12□□□□□ -0.95
SEC13-216ENST00000479868 DEFB4AO15263 64 aa9.12□□□□□ -0.95
SEC13-216ENST00000479868 PRSS2P07478 247 aa9.12□□□□□ -0.95
SEC13-216ENST00000479868 IGLV4-60A0A075B6I1 120 aa9.12□□□□□ -0.95
SEC13-216ENST00000479868 NDUFA1O15239 70 aa9.12□□□□□ -0.95
SEC13-216ENST00000479868 FAM222AQ5U5X8 452 aa9.12□□□□□ -0.95
SEC13-216ENST00000479868 SPANXDQ9BXN6 97 aa9.12□□□□□ -0.95
SEC13-216ENST00000479868 SPANXCQ9NY87 97 aa9.12□□□□□ -0.95
SEC13-216ENST00000479868 F5H768 121 aa9.11□□□□□ -0.95
SEC13-216ENST00000479868 GYPEP15421 78 aa9.11□□□□□ -0.95
SEC13-216ENST00000479868 WFDC2Q14508 124 aa9.11□□□□□ -0.95
SEC13-216ENST00000479868 A0A0B4J2C4 111 aa9.1□□□□□ -0.95
SEC13-216ENST00000479868 F8W1H4 67 aa9.1□□□□□ -0.95
SEC13-216ENST00000479868 NPC2P61916 151 aa9.1□□□□□ -0.95
SEC13-216ENST00000479868 MIAQ16674 131 aa9.1□□□□□ -0.95
SEC13-216ENST00000479868 CHCHD5Q9BSY4 110 aa9.1□□□□□ -0.95
SEC13-216ENST00000479868 WFDC9Q8NEX5 89 aa9.1□□□□□ -0.95
SEC13-216ENST00000479868 Q9H8V8 135 aa9.1□□□□□ -0.95
SEC13-216ENST00000479868 PRO0461Q9UI25 63 aa9.1□□□□□ -0.95
SEC13-216ENST00000479868 IGHV3-33P01772 117 aa9.09□□□□□ -0.95
SEC13-216ENST00000479868 APOC4P55056 127 aa9.09□□□□□ -0.95
SEC13-216ENST00000479868 DAND5Q8N907 189 aa9.09□□□□□ -0.95
SEC13-216ENST00000479868 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.09□□□□□ -0.95
SEC13-216ENST00000479868 IGKV3OR2-268A0A0C4DH90 116 aa9.09□□□□□ -0.95
SEC13-216ENST00000479868 PSMB2P49721 201 aa9.09□□□□□ -0.95
SEC13-216ENST00000479868 ATP6V0E2Q8NHE4 81 aa9.09□□□□□ -0.95
SEC13-216ENST00000479868 ZNF625Q96I27 306 aaPredicted RBP9.09□□□□□ -0.95
SEC13-216ENST00000479868 IGHV4-28A0A0C4DH34 117 aa9.08□□□□□ -0.96
SEC13-216ENST00000479868 LYRM9A8MSI8 78 aa9.08□□□□□ -0.96
SEC13-216ENST00000479868 H7C2G1 150 aa9.08□□□□□ -0.96
SEC13-216ENST00000479868 PRO0255Q9UI72 69 aa9.08□□□□□ -0.96
SEC13-216ENST00000479868 TIMM17BO60830 172 aa9.08□□□□□ -0.96
SEC13-216ENST00000479868 A0A096LPF7 62 aa9.07□□□□□ -0.96
SEC13-216ENST00000479868 TEX48A0A1B0GUV7 120 aa9.07□□□□□ -0.96
SEC13-216ENST00000479868 TCL1BO95988 128 aa9.07□□□□□ -0.96
SEC13-216ENST00000479868 G3V4G9 280 aa9.07□□□□□ -0.96
SEC13-216ENST00000479868 HERV-K104P63124 156 aa9.07□□□□□ -0.96
SEC13-216ENST00000479868 ERG28Q9UKR5 140 aa9.07□□□□□ -0.96
SEC13-216ENST00000479868 WIPF1O43516 503 aa9.06□□□□□ -0.96
SEC13-216ENST00000479868 LYRM7Q5U5X0 104 aa9.06□□□□□ -0.96
SEC13-216ENST00000479868 SH2D6Q7Z4S9 175 aa9.06□□□□□ -0.96
SEC13-216ENST00000479868 A0A0U1RRA0 63 aa9.06□□□□□ -0.96
SEC13-216ENST00000479868 IGHV4-30-4P0DP06 118 aa9.06□□□□□ -0.96
SEC13-216ENST00000479868 ETDBQ3ZM63 59 aa9.06□□□□□ -0.96
SEC13-216ENST00000479868 Q8NAQ8 132 aa9.06□□□□□ -0.96
SEC13-216ENST00000479868 CELA1Q9UNI1 258 aa9.06□□□□□ -0.96
SEC13-216ENST00000479868 F8WDY8 70 aa9.05□□□□□ -0.96
SEC13-216ENST00000479868 PAX4O43316 350 aa9.05□□□□□ -0.96
SEC13-216ENST00000479868 SCGB1C2P0DMR2 95 aa9.05□□□□□ -0.96
SEC13-216ENST00000479868 CKS1BP61024 79 aa9.05□□□□□ -0.96
SEC13-216ENST00000479868 SMCPP49901 116 aaPredicted RBP9.05□□□□□ -0.96
SEC13-216ENST00000479868 PRIMA1Q86XR5 153 aa9.05□□□□□ -0.96
SEC13-216ENST00000479868 CIRBPQ14011 172 aaKnown RBP9.04□□□□□ -0.96
SEC13-216ENST00000479868 Q1RN00 199 aa9.04□□□□□ -0.96
SEC13-216ENST00000479868 IFITM1P13164 125 aa9.04□□□□□ -0.96
SEC13-216ENST00000479868 DAD1P61803 113 aa9.04□□□□□ -0.96
SEC13-216ENST00000479868 TRBV20-1A0A075B6N2 111 aa9.03□□□□□ -0.96
SEC13-216ENST00000479868 IGHV3OR16-9A0A0B4J2B5 98 aa9.03□□□□□ -0.96
SEC13-216ENST00000479868 TMEM262E9PQX1 116 aa9.03□□□□□ -0.96
SEC13-216ENST00000479868 MIFP14174 115 aa9.02□□□□□ -0.96
SEC13-216ENST00000479868 LINC00308Q8TCZ7 52 aa9.02□□□□□ -0.96
SEC13-216ENST00000479868 RNF183Q96D59 192 aa9.02□□□□□ -0.96
SEC13-216ENST00000479868 FBN1P35555 2871 aaKnown RBP9.02□□□□□ -0.96
SEC13-216ENST00000479868 MEIG1Q5JSS6 88 aa9.02□□□□□ -0.97
SEC13-216ENST00000479868 STAB1Q9NY15 2570 aa9.02□□□□□ -0.97
SEC13-216ENST00000479868 LINC00959A0A1B0GUT2 108 aa9.01□□□□□ -0.97
SEC13-216ENST00000479868 SOSTDC1Q6X4U4 206 aa9.01□□□□□ -0.97
SEC13-216ENST00000479868 COX7B2Q8TF08 81 aa9.01□□□□□ -0.97
SEC13-216ENST00000479868 PKD1L1Q8TDX9 2849 aa9.01□□□□□ -0.97
SEC13-216ENST00000479868 A0A1B0GUV1 79 aa9.01□□□□□ -0.97
SEC13-216ENST00000479868 TRIAP1O43715 76 aa9.01□□□□□ -0.97
SEC13-216ENST00000479868 KRTAP24-1Q3LI83 254 aa9.01□□□□□ -0.97
SEC13-216ENST00000479868 TOMM7Q9P0U1 55 aa9.01□□□□□ -0.97
SEC13-216ENST00000479868 C5orf38Q86SI9 138 aa9□□□□□ -0.97
SEC13-216ENST00000479868 A0A087WZ39 114 aa9□□□□□ -0.97
SEC13-216ENST00000479868 TRBV30A0A0K0K1B3 111 aa9□□□□□ -0.97
SEC13-216ENST00000479868 ATP5G1P05496 136 aa9□□□□□ -0.97
SEC13-216ENST00000479868 CLPSL2Q6UWE3 100 aa9□□□□□ -0.97
SEC13-216ENST00000479868 SIGMAR1Q99720 223 aa8.99□□□□□ -0.97
SEC13-216ENST00000479868 ICOSQ9Y6W8 199 aa8.99□□□□□ -0.97
SEC13-216ENST00000479868 ANK2Q01484 3957 aa8.99□□□□□ -0.97
SEC13-216ENST00000479868 SPART-AS1P0CW21 52 aa8.99□□□□□ -0.97
SEC13-216ENST00000479868 KRTAP10-11P60412 298 aa8.99□□□□□ -0.97
SEC13-216ENST00000479868 C1orf43Q9BWL3 253 aa8.99□□□□□ -0.97
SEC13-216ENST00000479868 RPL13AP40429 203 aaKnown RBP8.98□□□□□ -0.97
SEC13-216ENST00000479868 XCL1P47992 114 aa8.98□□□□□ -0.97
SEC13-216ENST00000479868 Q8N3U1 123 aa8.98□□□□□ -0.97
SEC13-216ENST00000479868 HTN3P15516 51 aa8.98□□□□□ -0.97
SEC13-216ENST00000479868 CMYA5Q8N3K9 4069 aa8.97□□□□□ -0.97
SEC13-216ENST00000479868 SS18Q15532 418 aa8.96□□□□□ -0.98
SEC13-216ENST00000479868 C9JAW5 83 aa8.95□□□□□ -0.98
SEC13-216ENST00000479868 LINC00269Q8N2A0 174 aa8.95□□□□□ -0.98
SEC13-216ENST00000479868 MAST4O15021 2626 aa8.95□□□□□ -0.98
SEC13-216ENST00000479868 ATXN8Q156A1 80 aa8.95□□□□□ -0.98
SEC13-216ENST00000479868 COPS9Q8WXC6 57 aa8.95□□□□□ -0.98
SEC13-216ENST00000479868 MIR7-3HGQ8N6C7 128 aa8.94□□□□□ -0.98
SEC13-216ENST00000479868 RETNQ9HD89 108 aa8.94□□□□□ -0.98
SEC13-216ENST00000479868 SS18L2Q9UHA2 77 aa8.94□□□□□ -0.98
SEC13-216ENST00000479868 SLC25A20O43772 301 aa8.94□□□□□ -0.98
SEC13-216ENST00000479868 FOXI1Q12951 378 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms