RNA–Protein interactions for RNA: ENST00000479635.1

VSIG1-204, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

TSL 3

Gene VSIG1, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-204ENST00000479635 GRIN2AQ12879 1464 aa-0.31□□□□□ -2.46
VSIG1-204ENST00000479635 GAPVD1Q14C86 1478 aa-0.31□□□□□ -2.46
VSIG1-204ENST00000479635 C2CD3Q4AC94 2353 aa-0.31□□□□□ -2.46
VSIG1-204ENST00000479635 ZFHX3Q15911 3703 aa-0.31□□□□□ -2.46
VSIG1-204ENST00000479635 MYOM1P52179 1685 aa-0.31□□□□□ -2.46
VSIG1-204ENST00000479635 ROBO1Q9Y6N7 1651 aa-0.31□□□□□ -2.46
VSIG1-204ENST00000479635 AKAP6Q13023 2319 aa-0.31□□□□□ -2.46
VSIG1-204ENST00000479635 KIAA0556O60303 1618 aa-0.31□□□□□ -2.46
VSIG1-204ENST00000479635 PKD1L2Q7Z442 2459 aa-0.31□□□□□ -2.46
VSIG1-204ENST00000479635 HMGXB3Q12766 1538 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 SCN7AQ01118 1682 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 SHANK2Q9UPX8 1470 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 TRBV7-3A0A075B6L6 115 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 HMGN4O00479 90 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 SFT2D2O95562 160 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 APOC3P02656 99 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 SPRR2EP22531 72 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 TPPP2P59282 170 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 C12orf73Q69YU5 71 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 MAFIPQ8WZ33 124 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 SPRR4Q96PI1 79 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 MGST2Q99735 147 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 DYNLRB1Q9NP97 96 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 CCDC167Q9P0B6 97 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 SERP1Q9Y6X1 66 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 ATRQ13535 2644 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 SPTBN2O15020 2390 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 CPSF1Q10570 1443 aaKnown RBP-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 REV3LO60673 3130 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 MYH7P12883 1935 aa-0.32□□□□□ -2.46
VSIG1-204ENST00000479635 KIAA0100Q14667 2235 aaKnown RBP-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 TET3O43151 1660 aa-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 DSPP15924 2871 aaKnown RBP-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 MAGI1Q96QZ7 1491 aaPredicted RBP-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 CSPG4Q6UVK1 2322 aa-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 PIGBOS1A0A0B4J2F0 54 aa-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 TRBV7-4A0A0J9YYF1 115 aa-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 LOC105371267A0A1B0GV96 52 aa-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 KALRNO60229 2985 aa-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 ARPC4P59998 168 aa-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 C10orf113Q5VZT2 155 aa-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 MRPL54Q6P161 138 aaKnown RBP-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 TMEM263Q8WUH6 116 aaKnown RBP-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 SPANXDQ9BXN6 97 aa-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 RERGLQ9H628 205 aa-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 LINC00474Q9P2X8 69 aa-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 LAMA1P25391 3075 aa-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 BPTFQ12830 3046 aa-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 NIPBLQ6KC79 2804 aaeCLIP-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 MXRA5Q9NR99 2828 aa-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 QRICH2Q9H0J4 1663 aa-0.33□□□□□ -2.46
VSIG1-204ENST00000479635 MYO18BQ8IUG5 2567 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 MBD5Q9P267 1494 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 LAMA3Q16787 3333 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 PAPPA2Q9BXP8 1791 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 TCHHQ07283 1943 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 LAMA2P24043 3122 aaKnown RBP-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 LOC285095A0A1B0GVY8 99 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 MIF4GDA9UHW6 222 aaKnown RBP-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 CHKB-CPT1BH3BT56 60 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 GNG7O60262 68 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 MGPP08493 103 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 IGLC1P0CG04 106 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 DEFB135Q30KP9 77 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 MEIG1Q5JSS6 88 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 NUP188Q5SRE5 1749 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 FAM223AQ8IWN6 122 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 XRN1Q8IZH2 1706 aaKnown RBP-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 MYOZ3Q8TDC0 251 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 LCN9Q8WX39 176 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 COPS9Q8WXC6 57 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 LINC01600Q96MT4 127 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 PFDN5Q99471 154 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 SNRNP25Q9BV90 132 aaKnown RBP-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 NAA60Q9H7X0 242 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 NXT2Q9NPJ8 142 aaKnown RBP-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 CDC42SE2Q9NRR3 84 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 PLCE1Q9P212 2302 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 APLNQ9ULZ1 77 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 UNC13AQ9UPW8 1703 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 MARF1Q9Y4F3 1742 aaKnown RBP-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 ARL2-SNX15V9GYD0 113 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 NBPF19A0A087WUL8 3843 aa-0.34□□□□□ -2.46
VSIG1-204ENST00000479635 C1orf167Q5SNV9 1468 aa-0.35□□□□□ -2.46
VSIG1-204ENST00000479635 PRRC2CQ9Y520 2896 aaKnown RBP-0.35□□□□□ -2.46
VSIG1-204ENST00000479635 LYSTQ99698 3801 aa-0.35□□□□□ -2.46
VSIG1-204ENST00000479635 A0A0G2JMZ2 1700 aa-0.35□□□□□ -2.47
VSIG1-204ENST00000479635 AKAP9Q99996 3911 aa-0.35□□□□□ -2.47
VSIG1-204ENST00000479635 SETBP1Q9Y6X0 1596 aa-0.35□□□□□ -2.47
VSIG1-204ENST00000479635 SMG6Q86US8 1419 aaKnown RBP-0.35□□□□□ -2.47
VSIG1-204ENST00000479635 LOC100130705A0A1B0GUX0 176 aa-0.35□□□□□ -2.47
VSIG1-204ENST00000479635 CPSF4LA6NMK7 179 aaKnown RBP-0.35□□□□□ -2.47
VSIG1-204ENST00000479635 OOSP1A8MZH6 123 aa-0.35□□□□□ -2.47
VSIG1-204ENST00000479635 FAM25AB3EWG3 89 aa-0.35□□□□□ -2.47
VSIG1-204ENST00000479635 FAM25CB3EWG5 89 aa-0.35□□□□□ -2.47
VSIG1-204ENST00000479635 FAM25GB3EWG6 89 aa-0.35□□□□□ -2.47
VSIG1-204ENST00000479635 SYS1-DBNDD2H3BUS1 97 aa-0.35□□□□□ -2.47
VSIG1-204ENST00000479635 COX8AP10176 69 aa-0.35□□□□□ -2.47
VSIG1-204ENST00000479635 UBA52P62987 128 aaKnown RBP-0.35□□□□□ -2.47
VSIG1-204ENST00000479635 CATR1Q13166 79 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms