RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 ATP5LO75964 103 aa5.88□□□□□ -1.47
DDX56-211ENST00000479602 SMIM6P0DI80 62 aa5.88□□□□□ -1.47
DDX56-211ENST00000479602 S100A2P29034 98 aa5.88□□□□□ -1.47
DDX56-211ENST00000479602 KRTAP10-1P60331 282 aa5.88□□□□□ -1.47
DDX56-211ENST00000479602 C14orf177Q52M58 125 aa5.88□□□□□ -1.47
DDX56-211ENST00000479602 Q6ZN92 141 aa5.88□□□□□ -1.47
DDX56-211ENST00000479602 Q6ZUT4 128 aa5.88□□□□□ -1.47
DDX56-211ENST00000479602 NTN5Q8WTR8 489 aaPredicted RBP5.88□□□□□ -1.47
DDX56-211ENST00000479602 HMCN2Q8NDA2 5059 aa5.88□□□□□ -1.47
DDX56-211ENST00000479602 LRP1Q07954 4544 aaKnown RBP5.87□□□□□ -1.47
DDX56-211ENST00000479602 IGLV5-45A0A087WSX0 123 aa5.87□□□□□ -1.47
DDX56-211ENST00000479602 A0A087WTM6 91 aa5.87□□□□□ -1.47
DDX56-211ENST00000479602 IGHV3OR16-9A0A0B4J2B5 98 aa5.87□□□□□ -1.47
DDX56-211ENST00000479602 F8WDY8 70 aa5.87□□□□□ -1.47
DDX56-211ENST00000479602 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.87□□□□□ -1.47
DDX56-211ENST00000479602 UBE2D1P51668 147 aa5.87□□□□□ -1.47
DDX56-211ENST00000479602 SS18Q15532 418 aa5.87□□□□□ -1.47
DDX56-211ENST00000479602 TEX43Q6ZNM6 134 aa5.87□□□□□ -1.47
DDX56-211ENST00000479602 C2orf88Q9BSF0 95 aa5.87□□□□□ -1.47
DDX56-211ENST00000479602 TRAV12-1A0A0B4J245 112 aa5.86□□□□□ -1.47
DDX56-211ENST00000479602 EPM2AB3EWF7 344 aa5.86□□□□□ -1.47
DDX56-211ENST00000479602 SERF1AO75920 110 aa5.86□□□□□ -1.47
DDX56-211ENST00000479602 FUSP35637 526 aaKnown RBP eCLIP5.86□□□□□ -1.47
DDX56-211ENST00000479602 FOXI1Q12951 378 aa5.86□□□□□ -1.47
DDX56-211ENST00000479602 CHCHD10Q8WYQ3 142 aaPredicted RBP5.86□□□□□ -1.47
DDX56-211ENST00000479602 A0A087WZ39 114 aa5.85□□□□□ -1.47
DDX56-211ENST00000479602 GVQW2A0A096LPI5 108 aaPredicted RBP5.85□□□□□ -1.47
DDX56-211ENST00000479602 IFITM10A6NMD0 228 aa5.85□□□□□ -1.47
DDX56-211ENST00000479602 AKR1D1P51857 326 aa5.85□□□□□ -1.47
DDX56-211ENST00000479602 CNBPP62633 177 aaKnown RBP5.85□□□□□ -1.47
DDX56-211ENST00000479602 HERVK_113P63121 156 aa5.85□□□□□ -1.47
DDX56-211ENST00000479602 PMVKQ15126 192 aa5.85□□□□□ -1.47
DDX56-211ENST00000479602 LINC00242Q5T6M2 205 aa5.85□□□□□ -1.47
DDX56-211ENST00000479602 CFAP161Q6P656 301 aa5.85□□□□□ -1.47
DDX56-211ENST00000479602 SCGB3A1Q96QR1 104 aa5.85□□□□□ -1.47
DDX56-211ENST00000479602 C12orf57Q99622 126 aa5.85□□□□□ -1.47
DDX56-211ENST00000479602 VCX2Q9H322 139 aa5.85□□□□□ -1.47
DDX56-211ENST00000479602 IGKV2D-24A0A075B6R9 120 aa5.84□□□□□ -1.47
DDX56-211ENST00000479602 TINCRA0A1B0GVN0 87 aa5.84□□□□□ -1.47
DDX56-211ENST00000479602 C5orf52A6NGY3 159 aa5.84□□□□□ -1.47
DDX56-211ENST00000479602 EREGO14944 169 aa5.84□□□□□ -1.47
DDX56-211ENST00000479602 PSCAO43653 123 aa5.84□□□□□ -1.47
DDX56-211ENST00000479602 INAFM2P0DMQ5 153 aa5.84□□□□□ -1.47
DDX56-211ENST00000479602 OR10D4PQ8NGN7 298 aa5.84□□□□□ -1.47
DDX56-211ENST00000479602 BAALCQ8WXS3 180 aa5.84□□□□□ -1.47
DDX56-211ENST00000479602 Q9HAA7 133 aa5.84□□□□□ -1.47
DDX56-211ENST00000479602 HSPB8Q9UJY1 196 aa5.84□□□□□ -1.47
DDX56-211ENST00000479602 FAT3Q8TDW7 4589 aa5.84□□□□□ -1.47
DDX56-211ENST00000479602 IGHV1-58A0A0C4DH39 117 aa5.83□□□□□ -1.48
DDX56-211ENST00000479602 IGLC3P0DOY3 106 aa5.83□□□□□ -1.48
DDX56-211ENST00000479602 ODF1Q14990 250 aa5.83□□□□□ -1.48
DDX56-211ENST00000479602 Q8N814 137 aa5.83□□□□□ -1.48
DDX56-211ENST00000479602 CST9LQ9H4G1 147 aa5.83□□□□□ -1.48
DDX56-211ENST00000479602 COX7A2LO14548 114 aa5.82□□□□□ -1.48
DDX56-211ENST00000479602 LEPROTL1O95214 131 aa5.82□□□□□ -1.48
DDX56-211ENST00000479602 SNRPEP62304 92 aaKnown RBP5.82□□□□□ -1.48
DDX56-211ENST00000479602 Q5VSD8 79 aa5.82□□□□□ -1.48
DDX56-211ENST00000479602 C15orf56Q8N910 161 aa5.82□□□□□ -1.48
DDX56-211ENST00000479602 DEFB104AQ8WTQ1 72 aa5.82□□□□□ -1.48
DDX56-211ENST00000479602 IFI27L1Q96BM0 104 aa5.82□□□□□ -1.48
DDX56-211ENST00000479602 C2orf48Q96LS8 159 aa5.82□□□□□ -1.48
DDX56-211ENST00000479602 PKIGQ9Y2B9 76 aa5.82□□□□□ -1.48
DDX56-211ENST00000479602 UBR4Q5T4S7 5183 aa5.81□□□□□ -1.48
DDX56-211ENST00000479602 USP17L23D6RBM5 183 aa5.81□□□□□ -1.48
DDX56-211ENST00000479602 APOMO95445 188 aa5.81□□□□□ -1.48
DDX56-211ENST00000479602 GCSHP23434 173 aa5.81□□□□□ -1.48
DDX56-211ENST00000479602 CLPSL2Q6UWE3 100 aa5.81□□□□□ -1.48
DDX56-211ENST00000479602 OPRPNQ99935 248 aaPredicted RBP5.81□□□□□ -1.48
DDX56-211ENST00000479602 IGLV4-69A0A075B6H9 119 aa5.8□□□□□ -1.48
DDX56-211ENST00000479602 IGHV3-64A0A075B6Q5 118 aa5.8□□□□□ -1.48
DDX56-211ENST00000479602 TRAV13-1A0A0B4J241 112 aa5.8□□□□□ -1.48
DDX56-211ENST00000479602 GAGE12HA6NDE8 117 aa5.8□□□□□ -1.48
DDX56-211ENST00000479602 F8VRH5 84 aa5.8□□□□□ -1.48
DDX56-211ENST00000479602 XCL1P47992 114 aa5.8□□□□□ -1.48
DDX56-211ENST00000479602 RNF151Q2KHN1 245 aa5.8□□□□□ -1.48
DDX56-211ENST00000479602 SFTA2Q6UW10 78 aa5.8□□□□□ -1.48
DDX56-211ENST00000479602 MAP1LC3CQ9BXW4 147 aa5.8□□□□□ -1.48
DDX56-211ENST00000479602 IGLV10-54A0A075B6I4 117 aa5.79□□□□□ -1.48
DDX56-211ENST00000479602 IGLV5-39A0A0G2JS06 123 aa5.79□□□□□ -1.48
DDX56-211ENST00000479602 C20orf202A1L168 122 aa5.79□□□□□ -1.48
DDX56-211ENST00000479602 PCP4L1A6NKN8 68 aa5.79□□□□□ -1.48
DDX56-211ENST00000479602 NUPR1O60356 82 aa5.79□□□□□ -1.48
DDX56-211ENST00000479602 PLNP26678 52 aa5.79□□□□□ -1.48
DDX56-211ENST00000479602 WFDC2Q14508 124 aa5.79□□□□□ -1.48
DDX56-211ENST00000479602 Q8IZM0 81 aa5.79□□□□□ -1.48
DDX56-211ENST00000479602 FAM30AQ9NZY2 134 aa5.79□□□□□ -1.48
DDX56-211ENST00000479602 SMR3BP02814 79 aaPredicted RBP5.78□□□□□ -1.48
DDX56-211ENST00000479602 FABP4P15090 132 aa5.78□□□□□ -1.48
DDX56-211ENST00000479602 CXCL5P42830 114 aa5.78□□□□□ -1.48
DDX56-211ENST00000479602 PMCHL1Q16048 86 aa5.78□□□□□ -1.48
DDX56-211ENST00000479602 RNASE13Q5GAN3 156 aaKnown RBP5.78□□□□□ -1.48
DDX56-211ENST00000479602 PET117Q6UWS5 81 aa5.78□□□□□ -1.48
DDX56-211ENST00000479602 Q6ZSA8 131 aa5.78□□□□□ -1.48
DDX56-211ENST00000479602 HIST3H2BBQ8N257 126 aa5.78□□□□□ -1.48
DDX56-211ENST00000479602 FAM19A2Q8N3H0 131 aa5.78□□□□□ -1.48
DDX56-211ENST00000479602 C9orf163Q8N9P6 203 aa5.78□□□□□ -1.48
DDX56-211ENST00000479602 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.77□□□□□ -1.49
DDX56-211ENST00000479602 C11orf86A6NJI1 115 aa5.77□□□□□ -1.49
DDX56-211ENST00000479602 SMIM1B2RUZ4 78 aa5.77□□□□□ -1.49
DDX56-211ENST00000479602 H3BRM9 83 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms