RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 C9orf47Q6ZRZ4 202 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 COX8CQ7Z4L0 72 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 PRNTQ86SH4 94 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 ZNRF2Q8NHG8 242 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 DNAJC30Q96LL9 226 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 AGPAT4-IT1Q9H0P7 198 aa4.63□□□□□ -1.67
VCP-205ENST00000479300 IGHV1OR15-1A0A075B7D0 117 aa4.62□□□□□ -1.67
VCP-205ENST00000479300 IGKV2-40A0A087WW87 121 aaPredicted RBP4.62□□□□□ -1.67
VCP-205ENST00000479300 H3BNG1 76 aa4.62□□□□□ -1.67
VCP-205ENST00000479300 IGKV2D-40P01614 121 aaPredicted RBP4.62□□□□□ -1.67
VCP-205ENST00000479300 SCGB1C2P0DMR2 95 aa4.62□□□□□ -1.67
VCP-205ENST00000479300 ANXA2RQ3ZCQ2 193 aa4.62□□□□□ -1.67
VCP-205ENST00000479300 LYZL1Q6UWQ5 148 aa4.62□□□□□ -1.67
VCP-205ENST00000479300 GOLT1AQ6ZVE7 132 aa4.62□□□□□ -1.67
VCP-205ENST00000479300 AMN1Q8IY45 258 aa4.62□□□□□ -1.67
VCP-205ENST00000479300 C6orf223Q8N319 242 aa4.62□□□□□ -1.67
VCP-205ENST00000479300 ANKRD29Q8N6D5 301 aa4.62□□□□□ -1.67
VCP-205ENST00000479300 Q8N8P6 123 aa4.62□□□□□ -1.67
VCP-205ENST00000479300 SGK494Q96LW2 274 aa4.62□□□□□ -1.67
VCP-205ENST00000479300 LINC00467Q9BRT7 94 aa4.62□□□□□ -1.67
VCP-205ENST00000479300 KRTAP1-5Q9BYS1 174 aa4.62□□□□□ -1.67
VCP-205ENST00000479300 TTTY13Q9BZ97 58 aa4.62□□□□□ -1.67
VCP-205ENST00000479300 TRGV11A0A075B6L2 103 aa4.61□□□□□ -1.67
VCP-205ENST00000479300 RBAKDNA6NC62 111 aa4.61□□□□□ -1.67
VCP-205ENST00000479300 LINC01549A6NIU2 74 aa4.61□□□□□ -1.67
VCP-205ENST00000479300 KLLNB2CW77 178 aa4.61□□□□□ -1.67
VCP-205ENST00000479300 F8VRH5 84 aa4.61□□□□□ -1.67
VCP-205ENST00000479300 PAX4O43316 350 aa4.61□□□□□ -1.67
VCP-205ENST00000479300 RPL13AP40429 203 aaKnown RBP4.61□□□□□ -1.67
VCP-205ENST00000479300 MEIG1Q5JSS6 88 aa4.61□□□□□ -1.67
VCP-205ENST00000479300 FAM159AQ6UWV7 190 aa4.61□□□□□ -1.67
VCP-205ENST00000479300 Q6ZTI0 123 aa4.61□□□□□ -1.67
VCP-205ENST00000479300 RASL10AQ92737 203 aa4.61□□□□□ -1.67
VCP-205ENST00000479300 KIR2DL4Q99706 377 aa4.61□□□□□ -1.67
VCP-205ENST00000479300 CNFNQ9BYD5 112 aa4.61□□□□□ -1.67
VCP-205ENST00000479300 Q9H8V8 135 aa4.61□□□□□ -1.67
VCP-205ENST00000479300 LINC00588Q9Y4M8 146 aa4.61□□□□□ -1.67
VCP-205ENST00000479300 CSDC2Q9Y534 153 aaKnown RBP4.61□□□□□ -1.67
VCP-205ENST00000479300 ICOSQ9Y6W8 199 aa4.61□□□□□ -1.67
VCP-205ENST00000479300 TRGV4A0A0C4DH28 118 aa4.6□□□□□ -1.67
VCP-205ENST00000479300 LOC107984156A0A0G2JMH3 177 aa4.6□□□□□ -1.67
VCP-205ENST00000479300 FAM240AA0A1B0GVK7 77 aa4.6□□□□□ -1.67
VCP-205ENST00000479300 A0A1B0GX51 115 aa4.6□□□□□ -1.67
VCP-205ENST00000479300 H7C1H1 209 aa4.6□□□□□ -1.67
VCP-205ENST00000479300 TCL1BO95988 128 aa4.6□□□□□ -1.67
VCP-205ENST00000479300 IGLC6P0CF74 106 aa4.6□□□□□ -1.67
VCP-205ENST00000479300 INAFM2P0DMQ5 153 aa4.6□□□□□ -1.67
VCP-205ENST00000479300 ARL17AQ8IVW1 177 aa4.6□□□□□ -1.67
VCP-205ENST00000479300 LINC00612Q8N6U2 182 aa4.6□□□□□ -1.67
VCP-205ENST00000479300 RNF185Q96GF1 192 aa4.6□□□□□ -1.67
VCP-205ENST00000479300 FAM19A4Q96LR4 140 aa4.6□□□□□ -1.67
VCP-205ENST00000479300 MRPL35Q9NZE8 188 aaKnown RBP4.6□□□□□ -1.67
VCP-205ENST00000479300 LENEPQ9Y5L5 61 aa4.6□□□□□ -1.67
VCP-205ENST00000479300 TRAV8-1A0A0A6YYK1 113 aa4.59□□□□□ -1.67
VCP-205ENST00000479300 TRAV8-4A0A0B4J246 113 aa4.59□□□□□ -1.67
VCP-205ENST00000479300 TRAV4A0A0B4J268 109 aa4.59□□□□□ -1.67
VCP-205ENST00000479300 TRBV7-7A0A0K0K1E9 115 aa4.59□□□□□ -1.67
VCP-205ENST00000479300 EPM2AB3EWF7 344 aa4.59□□□□□ -1.67
VCP-205ENST00000479300 SLC25A20O43772 301 aa4.59□□□□□ -1.67
VCP-205ENST00000479300 TNFRSF6BO95407 300 aa4.59□□□□□ -1.67
VCP-205ENST00000479300 IGHV3-53P01767 116 aa4.59□□□□□ -1.67
VCP-205ENST00000479300 FUSP35637 526 aaKnown RBP eCLIP4.59□□□□□ -1.67
VCP-205ENST00000479300 CRIP1P50238 77 aa4.59□□□□□ -1.67
VCP-205ENST00000479300 Q8TAT8 98 aa4.59□□□□□ -1.67
VCP-205ENST00000479300 PRO0255Q9UI72 69 aa4.59□□□□□ -1.67
VCP-205ENST00000479300 TRAV21A0A0B4J279 112 aa4.58□□□□□ -1.68
VCP-205ENST00000479300 SMKR1H3BMG3 65 aa4.58□□□□□ -1.68
VCP-205ENST00000479300 J3KT08 172 aa4.58□□□□□ -1.68
VCP-205ENST00000479300 K7EMI3 77 aa4.58□□□□□ -1.68
VCP-205ENST00000479300 SH2D1AO60880 128 aa4.58□□□□□ -1.68
VCP-205ENST00000479300 LAGE3Q14657 143 aa4.58□□□□□ -1.68
VCP-205ENST00000479300 ESRGQ1W209 222 aa4.58□□□□□ -1.68
VCP-205ENST00000479300 C10orf126Q8N4M7 172 aa4.58□□□□□ -1.68
VCP-205ENST00000479300 ZFAND2AQ8N6M9 145 aa4.58□□□□□ -1.68
VCP-205ENST00000479300 C11orf72Q8NBR9 251 aa4.58□□□□□ -1.68
VCP-205ENST00000479300 C8orf49Q96NF6 230 aa4.58□□□□□ -1.68
VCP-205ENST00000479300 UPK3BQ9BT76 320 aa4.58□□□□□ -1.68
VCP-205ENST00000479300 TPPP3Q9BW30 176 aa4.58□□□□□ -1.68
VCP-205ENST00000479300 IMUPQ9GZP8 106 aa4.58□□□□□ -1.68
VCP-205ENST00000479300 PPDPFQ9H3Y8 114 aa4.58□□□□□ -1.68
VCP-205ENST00000479300 A0A096LPF7 62 aa4.57□□□□□ -1.68
VCP-205ENST00000479300 ORM1P02763 201 aa4.57□□□□□ -1.68
VCP-205ENST00000479300 RPS28P62857 69 aaKnown RBP4.57□□□□□ -1.68
VCP-205ENST00000479300 PAPPA-AS1Q5QFB9 102 aa4.57□□□□□ -1.68
VCP-205ENST00000479300 PRR9Q5T870 116 aa4.57□□□□□ -1.68
VCP-205ENST00000479300 ZFP2Q6ZN57 461 aa4.57□□□□□ -1.68
VCP-205ENST00000479300 OR13C6PQ8NH95 151 aa4.57□□□□□ -1.68
VCP-205ENST00000479300 HMCN2Q8NDA2 5059 aa4.56□□□□□ -1.68
VCP-205ENST00000479300 ZNF815PA8K554 130 aa4.56□□□□□ -1.68
VCP-205ENST00000479300 H3BVH4 76 aa4.56□□□□□ -1.68
VCP-205ENST00000479300 M0R2P5 195 aa4.56□□□□□ -1.68
VCP-205ENST00000479300 NXPH4O95158 308 aa4.56□□□□□ -1.68
VCP-205ENST00000479300 HERVK_113P61574 105 aa4.56□□□□□ -1.68
VCP-205ENST00000479300 SRSF9Q13242 221 aaKnown RBP eCLIP4.56□□□□□ -1.68
VCP-205ENST00000479300 ATXN8Q156A1 80 aa4.56□□□□□ -1.68
VCP-205ENST00000479300 ORMDL2Q53FV1 153 aa4.56□□□□□ -1.68
VCP-205ENST00000479300 TMEM170BQ5T4T1 132 aa4.56□□□□□ -1.68
VCP-205ENST00000479300 Q5VSD8 79 aa4.56□□□□□ -1.68
VCP-205ENST00000479300 Q6ZRN7 208 aaPredicted RBP4.56□□□□□ -1.68
VCP-205ENST00000479300 UBE2WQ96B02 151 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 188.8 ms