RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 Q96MF0 132 aa15.1■□□□□ 0.01
SDF4-206ENST00000478938 AKAP6Q13023 2319 aa15.09■□□□□ 0.01
SDF4-206ENST00000478938 SPTA1P02549 2419 aa15.09■□□□□ 0.01
SDF4-206ENST00000478938 HRNRQ86YZ3 2850 aaPredicted RBP15.08■□□□□ 0.01
SDF4-206ENST00000478938 TRAV10A0A0B4J240 114 aa15.07■□□□□ 0
SDF4-206ENST00000478938 CCL18P55774 89 aa15.07■□□□□ 0
SDF4-206ENST00000478938 BPESC1Q9GZL8 116 aa15.07■□□□□ 0
SDF4-206ENST00000478938 LINC00158P58513 81 aa15.06■□□□□ 0
SDF4-206ENST00000478938 Q6ZTI0 123 aa15.06■□□□□ 0
SDF4-206ENST00000478938 UBL5Q9BZL1 73 aa15.06■□□□□ 0
SDF4-206ENST00000478938 LINC00482Q8N8I6 264 aa15.05■□□□□ 0
SDF4-206ENST00000478938 MOB4Q9Y3A3 225 aa15.05■□□□□ 0
SDF4-206ENST00000478938 TRBV10-3A0A0K0K1G6 114 aa15.04■□□□□ -0
SDF4-206ENST00000478938 ANKRD11Q6UB99 2663 aaPredicted RBP15.04■□□□□ -0
SDF4-206ENST00000478938 BLCAPP62952 87 aa15.04■□□□□ -0
SDF4-206ENST00000478938 TOMM7Q9P0U1 55 aa15.04■□□□□ -0
SDF4-206ENST00000478938 CCL21O00585 134 aa15.03■□□□□ -0
SDF4-206ENST00000478938 SNRPD3P62318 126 aaKnown RBP15.03■□□□□ -0
SDF4-206ENST00000478938 GRNP28799 593 aaKnown RBP15.03■□□□□ -0
SDF4-206ENST00000478938 USMG5Q96IX5 58 aa15.02□□□□□ -0.01
SDF4-206ENST00000478938 FAM19A3Q7Z5A8 133 aa15.01□□□□□ -0.01
SDF4-206ENST00000478938 MPLKIPQ8TAP9 179 aa15.01□□□□□ -0.01
SDF4-206ENST00000478938 JMJD7-PLA2G4BH0Y9G9 81 aa15□□□□□ -0.01
SDF4-206ENST00000478938 PAX4O43316 350 aa15□□□□□ -0.01
SDF4-206ENST00000478938 FAM229BQ4G0N7 80 aa15□□□□□ -0.01
SDF4-206ENST00000478938 IGHV3-53P01767 116 aa15□□□□□ -0.01
SDF4-206ENST00000478938 RNASE1P07998 156 aaKnown RBP15□□□□□ -0.01
SDF4-206ENST00000478938 ACACAQ13085 2346 aa14.99□□□□□ -0.01
SDF4-206ENST00000478938 COX7B2Q8TF08 81 aa14.98□□□□□ -0.01
SDF4-206ENST00000478938 SPTAN1Q13813 2472 aaKnown RBP14.98□□□□□ -0.01
SDF4-206ENST00000478938 K7EQG2 157 aa14.97□□□□□ -0.01
SDF4-206ENST00000478938 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.97□□□□□ -0.018e-7■□□□□ 10.8
SDF4-206ENST00000478938 LY6EQ16553 131 aa14.96□□□□□ -0.01
SDF4-206ENST00000478938 BCE1O60756 84 aa14.95□□□□□ -0.02
SDF4-206ENST00000478938 CFHR3Q02985 330 aa14.95□□□□□ -0.02
SDF4-206ENST00000478938 LINC01547P58512 204 aaPredicted RBP14.94□□□□□ -0.02
SDF4-206ENST00000478938 CDC42SE2Q9NRR3 84 aa14.94□□□□□ -0.02
SDF4-206ENST00000478938 C2CD3Q4AC94 2353 aa14.94□□□□□ -0.02
SDF4-206ENST00000478938 K7EMT4 169 aa14.94□□□□□ -0.02
SDF4-206ENST00000478938 HAMPP81172 84 aa14.94□□□□□ -0.02
SDF4-206ENST00000478938 CEP295Q9C0D2 2601 aa14.93□□□□□ -0.02
SDF4-206ENST00000478938 COL12A1Q99715 3063 aa14.93□□□□□ -0.02
SDF4-206ENST00000478938 LINC00167Q96N53 147 aa14.93□□□□□ -0.02
SDF4-206ENST00000478938 TM2D3Q9BRN9 247 aa14.93□□□□□ -0.02
SDF4-206ENST00000478938 M0R2N4 97 aa14.92□□□□□ -0.02
SDF4-206ENST00000478938 NTM-AS1Q6ZSK4 140 aa14.92□□□□□ -0.02
SDF4-206ENST00000478938 Q8N814 137 aa14.92□□□□□ -0.02
SDF4-206ENST00000478938 CREBBPQ92793 2442 aa14.91□□□□□ -0.02
SDF4-206ENST00000478938 TMEM256-PLSCR3K7ERE1 68 aa14.91□□□□□ -0.02
SDF4-206ENST00000478938 BRD3OSQ6XYD6 125 aa14.91□□□□□ -0.02
SDF4-206ENST00000478938 IL17DQ8TAD2 202 aa14.91□□□□□ -0.02
SDF4-206ENST00000478938 TRBV6-4A0A1B0GX49 114 aa14.9□□□□□ -0.02
SDF4-206ENST00000478938 IGKV3OR2-268A0A0C4DH90 116 aa14.9□□□□□ -0.02
SDF4-206ENST00000478938 C11orf68Q9H3H3 251 aaKnown RBP14.9□□□□□ -0.02
SDF4-206ENST00000478938 LY6G6DO95868 133 aa14.89□□□□□ -0.03
SDF4-206ENST00000478938 A0A096LNT2 108 aa14.89□□□□□ -0.03
SDF4-206ENST00000478938 H3BUA1 57 aa14.88□□□□□ -0.03
SDF4-206ENST00000478938 MIFP14174 115 aa14.88□□□□□ -0.03
SDF4-206ENST00000478938 TRBV7-4A0A0J9YYF1 115 aa14.87□□□□□ -0.03
SDF4-206ENST00000478938 Q8NA96 180 aa14.87□□□□□ -0.03
SDF4-206ENST00000478938 NDUFC1O43677 76 aa14.86□□□□□ -0.03
SDF4-206ENST00000478938 C11orf71Q6IPW1 123 aa14.86□□□□□ -0.03
SDF4-206ENST00000478938 Q6ZQT0 140 aa14.86□□□□□ -0.03
SDF4-206ENST00000478938 Q6ZVQ6 151 aa14.86□□□□□ -0.03
SDF4-206ENST00000478938 Q8N3U1 123 aa14.86□□□□□ -0.03
SDF4-206ENST00000478938 ATP5EP56381 51 aaPredicted RBP14.85□□□□□ -0.03
SDF4-206ENST00000478938 PRR3P79522 188 aaKnown RBP14.85□□□□□ -0.03
SDF4-206ENST00000478938 PIEZO1Q92508 2521 aa14.85□□□□□ -0.03
SDF4-206ENST00000478938 IBA57-AS1B1ANH7 110 aa14.84□□□□□ -0.03
SDF4-206ENST00000478938 K7EQD1 137 aa14.84□□□□□ -0.03
SDF4-206ENST00000478938 IGLV1-40P01703 118 aa14.84□□□□□ -0.03
SDF4-206ENST00000478938 NANOS2P60321 138 aaKnown RBP14.84□□□□□ -0.03
SDF4-206ENST00000478938 SCXQ7RTU7 201 aa14.82□□□□□ -0.04
SDF4-206ENST00000478938 CRYBG3Q68DQ2 2970 aa14.81□□□□□ -0.04
SDF4-206ENST00000478938 PRB1P04280 392 aa14.81□□□□□ -0.04
SDF4-206ENST00000478938 ZNF843Q8N446 348 aa14.8□□□□□ -0.04
SDF4-206ENST00000478938 DEFB131AP59861 70 aa14.8□□□□□ -0.04
SDF4-206ENST00000478938 C10orf99Q6UWK7 81 aa14.8□□□□□ -0.04
SDF4-206ENST00000478938 UBE2L6O14933 153 aa14.8□□□□□ -0.04
SDF4-206ENST00000478938 H3BUX3 64 aa14.79□□□□□ -0.04
SDF4-206ENST00000478938 TMEM254Q8TBM7 123 aa14.79□□□□□ -0.04
SDF4-206ENST00000478938 C19orf84I3L1E1 186 aa14.79□□□□□ -0.04
SDF4-206ENST00000478938 NBASA2RRP1 2371 aa14.78□□□□□ -0.04
SDF4-206ENST00000478938 NREPQ16612 68 aa14.78□□□□□ -0.04
SDF4-206ENST00000478938 A0A087WZ39 114 aa14.77□□□□□ -0.04
SDF4-206ENST00000478938 TRBV10-1A0A0K0K1A3 114 aa14.77□□□□□ -0.04
SDF4-206ENST00000478938 SPTBN4Q9H254 2564 aa14.77□□□□□ -0.05
SDF4-206ENST00000478938 TLN1Q9Y490 2541 aaKnown RBP14.76□□□□□ -0.05
SDF4-206ENST00000478938 LMO4P61968 165 aa14.76□□□□□ -0.05
SDF4-206ENST00000478938 LAMTOR3Q9UHA4 124 aa14.76□□□□□ -0.05
SDF4-206ENST00000478938 PMAIP1Q13794 54 aa14.75□□□□□ -0.05
SDF4-206ENST00000478938 ESRGQ1W209 222 aa14.75□□□□□ -0.05
SDF4-206ENST00000478938 LOC110117498A0A087WWA1 95 aa14.74□□□□□ -0.05
SDF4-206ENST00000478938 ABCA2Q9BZC7 2435 aa14.74□□□□□ -0.05
SDF4-206ENST00000478938 TRGV1A0A0A0MS02 117 aa14.74□□□□□ -0.05
SDF4-206ENST00000478938 CXCL6P80162 114 aa14.74□□□□□ -0.05
SDF4-206ENST00000478938 IGHV3OR16-9A0A0B4J2B5 98 aa14.73□□□□□ -0.05
SDF4-206ENST00000478938 SPATA3Q8NHX4 192 aa14.73□□□□□ -0.05
SDF4-206ENST00000478938 IGF2RP11717 2491 aa14.73□□□□□ -0.05
SDF4-206ENST00000478938 VPS13CQ709C8 3753 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms