RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 PET100P0DJ07 73 aa6.58□□□□□ -1.36
HDAC8-217ENST00000478743 TWIST1Q15672 202 aa6.58□□□□□ -1.36
HDAC8-217ENST00000478743 TCEAL7Q9BRU2 100 aa6.58□□□□□ -1.36
HDAC8-217ENST00000478743 CYTL1Q9NRR1 136 aa6.58□□□□□ -1.36
HDAC8-217ENST00000478743 TP73-AS1Q9UF72 201 aa6.58□□□□□ -1.36
HDAC8-217ENST00000478743 F2Z2F3 143 aa6.57□□□□□ -1.36
HDAC8-217ENST00000478743 UPK1BO75841 260 aa6.57□□□□□ -1.36
HDAC8-217ENST00000478743 CFC1P0CG37 223 aa6.57□□□□□ -1.36
HDAC8-217ENST00000478743 ZNF727A8MUV8 499 aa6.56□□□□□ -1.36
HDAC8-217ENST00000478743 RPS20P60866 119 aaKnown RBP6.56□□□□□ -1.36
HDAC8-217ENST00000478743 PNRC1Q12796 327 aaPredicted RBP6.56□□□□□ -1.36
HDAC8-217ENST00000478743 KRTAP20-1Q3LI63 56 aa6.56□□□□□ -1.36
HDAC8-217ENST00000478743 Q8N377 158 aa6.56□□□□□ -1.36
HDAC8-217ENST00000478743 CSDC2Q9Y534 153 aaKnown RBP6.56□□□□□ -1.36
HDAC8-217ENST00000478743 FAM240BA0A1B0GVZ2 78 aa6.55□□□□□ -1.36
HDAC8-217ENST00000478743 SCO1O75880 301 aa6.55□□□□□ -1.36
HDAC8-217ENST00000478743 POLR2KP53803 58 aaKnown RBP6.55□□□□□ -1.36
HDAC8-217ENST00000478743 RPL7L1Q6DKI1 246 aaKnown RBP6.55□□□□□ -1.36
HDAC8-217ENST00000478743 PLEKHB2Q96CS7 222 aa6.55□□□□□ -1.36
HDAC8-217ENST00000478743 KIR2DL4Q99706 377 aa6.55□□□□□ -1.36
HDAC8-217ENST00000478743 CNFNQ9BYD5 112 aa6.55□□□□□ -1.36
HDAC8-217ENST00000478743 IFNA1P01562 189 aa6.54□□□□□ -1.36
HDAC8-217ENST00000478743 S100A9P06702 114 aaKnown RBP6.54□□□□□ -1.36
HDAC8-217ENST00000478743 RPL35P42766 123 aaKnown RBP6.54□□□□□ -1.36
HDAC8-217ENST00000478743 C4orf48Q5BLP8 95 aa6.54□□□□□ -1.36
HDAC8-217ENST00000478743 C9orf62Q8N4C0 152 aa6.54□□□□□ -1.36
HDAC8-217ENST00000478743 MUC12Q9UKN1 5478 aa6.53□□□□□ -1.36
HDAC8-217ENST00000478743 CENPWQ5EE01 88 aa6.53□□□□□ -1.36
HDAC8-217ENST00000478743 TMUB2Q71RG4 321 aa6.53□□□□□ -1.36
HDAC8-217ENST00000478743 ST20Q9HBF5 79 aa6.53□□□□□ -1.36
HDAC8-217ENST00000478743 TRBV27A0A0K0K1C4 114 aa6.52□□□□□ -1.37
HDAC8-217ENST00000478743 A0A1B0GV50 99 aa6.52□□□□□ -1.37
HDAC8-217ENST00000478743 RPL32P62910 135 aaKnown RBP6.52□□□□□ -1.37
HDAC8-217ENST00000478743 CCDC32Q9BV29 185 aa6.52□□□□□ -1.37
HDAC8-217ENST00000478743 IGKV2-28A0A075B6P5 120 aa6.51□□□□□ -1.37
HDAC8-217ENST00000478743 IGKV2D-28P01615 120 aa6.51□□□□□ -1.37
HDAC8-217ENST00000478743 RPL39P62891 51 aaKnown RBP6.51□□□□□ -1.37
HDAC8-217ENST00000478743 NDUFA12Q9UI09 145 aa6.51□□□□□ -1.37
HDAC8-217ENST00000478743 TMEM238C9JI98 176 aa6.5□□□□□ -1.37
HDAC8-217ENST00000478743 SPINK1P00995 79 aa6.5□□□□□ -1.37
HDAC8-217ENST00000478743 MT2AP02795 61 aa6.49□□□□□ -1.37
HDAC8-217ENST00000478743 AKR1C8PQ5T2L2 129 aa6.49□□□□□ -1.37
HDAC8-217ENST00000478743 FAM19A1Q7Z5A9 133 aa6.49□□□□□ -1.37
HDAC8-217ENST00000478743 SPRR4Q96PI1 79 aa6.49□□□□□ -1.37
HDAC8-217ENST00000478743 RAB19A4D1S5 217 aa6.48□□□□□ -1.37
HDAC8-217ENST00000478743 C9orf92A6NGG3 77 aa6.48□□□□□ -1.37
HDAC8-217ENST00000478743 IFITM10A6NMD0 228 aa6.48□□□□□ -1.37
HDAC8-217ENST00000478743 SMKR1H3BMG3 65 aa6.48□□□□□ -1.37
HDAC8-217ENST00000478743 FCER1GP30273 86 aa6.48□□□□□ -1.37
HDAC8-217ENST00000478743 TEX261Q6UWH6 196 aa6.48□□□□□ -1.37
HDAC8-217ENST00000478743 TIMM21Q9BVV7 248 aa6.48□□□□□ -1.37
HDAC8-217ENST00000478743 TRBV20OR9-2A0A075B6H5 130 aa6.47□□□□□ -1.37
HDAC8-217ENST00000478743 XKRY2A2RUG3 117 aa6.47□□□□□ -1.37
HDAC8-217ENST00000478743 KRTAP19-6Q3LI70 58 aa6.47□□□□□ -1.37
HDAC8-217ENST00000478743 TGIF2-C20orf24A0A0A6YYL0 155 aa6.46□□□□□ -1.38
HDAC8-217ENST00000478743 SSNA1O43805 119 aa6.46□□□□□ -1.38
HDAC8-217ENST00000478743 PFDN1O60925 122 aa6.46□□□□□ -1.38
HDAC8-217ENST00000478743 MT1FP04733 61 aa6.46□□□□□ -1.38
HDAC8-217ENST00000478743 Q5BKY6 102 aa6.46□□□□□ -1.38
HDAC8-217ENST00000478743 NUDT10Q8NFP7 164 aa6.46□□□□□ -1.38
HDAC8-217ENST00000478743 NUDT11Q96G61 164 aa6.46□□□□□ -1.38
HDAC8-217ENST00000478743 KRTAP9-3Q9BYQ3 159 aa6.46□□□□□ -1.38
HDAC8-217ENST00000478743 IGLV5-37A0A075B6J1 123 aa6.45□□□□□ -1.38
HDAC8-217ENST00000478743 FAM19A2Q8N3H0 131 aa6.45□□□□□ -1.38
HDAC8-217ENST00000478743 C11orf52Q96A22 123 aa6.45□□□□□ -1.38
HDAC8-217ENST00000478743 HIGD2AQ9BW72 106 aa6.45□□□□□ -1.38
HDAC8-217ENST00000478743 CBLN2Q8IUK8 224 aa6.44□□□□□ -1.38
HDAC8-217ENST00000478743 TMEM126AQ9H061 195 aa6.44□□□□□ -1.38
HDAC8-217ENST00000478743 TOMM7Q9P0U1 55 aa6.44□□□□□ -1.38
HDAC8-217ENST00000478743 M0R378 163 aa6.43□□□□□ -1.38
HDAC8-217ENST00000478743 SMIM15Q7Z3B0 74 aa6.43□□□□□ -1.38
HDAC8-217ENST00000478743 FAM210AQ96ND0 272 aa6.43□□□□□ -1.38
HDAC8-217ENST00000478743 SLC25A20O43772 301 aa6.42□□□□□ -1.38
HDAC8-217ENST00000478743 HBBP68871 147 aa6.42□□□□□ -1.38
HDAC8-217ENST00000478743 NRACQ8N912 160 aa6.42□□□□□ -1.38
HDAC8-217ENST00000478743 ENKURQ8TC29 256 aa6.42□□□□□ -1.38
HDAC8-217ENST00000478743 VCYO14598 125 aa6.41□□□□□ -1.38
HDAC8-217ENST00000478743 AMN1Q8IY45 258 aa6.41□□□□□ -1.38
HDAC8-217ENST00000478743 KCNRGQ8N5I3 272 aa6.41□□□□□ -1.38
HDAC8-217ENST00000478743 SFT2D1Q8WV19 159 aa6.41□□□□□ -1.38
HDAC8-217ENST00000478743 BORCS7-ASMTA0A0B4J1R7 106 aa6.4□□□□□ -1.38
HDAC8-217ENST00000478743 RAB4AP20338 218 aa6.4□□□□□ -1.38
HDAC8-217ENST00000478743 GNG4P50150 75 aa6.4□□□□□ -1.38
HDAC8-217ENST00000478743 CKS1BP61024 79 aa6.4□□□□□ -1.38
HDAC8-217ENST00000478743 RPS29P62273 56 aaKnown RBP6.4□□□□□ -1.38
HDAC8-217ENST00000478743 MRPS36P82909 103 aaKnown RBP6.4□□□□□ -1.38
HDAC8-217ENST00000478743 SMAGPQ0VAQ4 97 aa6.4□□□□□ -1.38
HDAC8-217ENST00000478743 Q6Q795 121 aa6.4□□□□□ -1.38
HDAC8-217ENST00000478743 NKAPP1Q8N9T2 125 aa6.4□□□□□ -1.38
HDAC8-217ENST00000478743 K7EN84 100 aa6.39□□□□□ -1.39
HDAC8-217ENST00000478743 SUMO2P61956 95 aaKnown RBP6.39□□□□□ -1.39
HDAC8-217ENST00000478743 CCL20P78556 96 aa6.39□□□□□ -1.39
HDAC8-217ENST00000478743 MOBPQ13875 183 aa6.39□□□□□ -1.39
HDAC8-217ENST00000478743 ZC2HC1BQ5TFG8 222 aa6.39□□□□□ -1.39
HDAC8-217ENST00000478743 FAM213BQ8TBF2 198 aa6.39□□□□□ -1.39
HDAC8-217ENST00000478743 MBD3L1Q8WWY6 194 aa6.39□□□□□ -1.39
HDAC8-217ENST00000478743 PRSS2P07478 247 aa6.38□□□□□ -1.39
HDAC8-217ENST00000478743 SPANXA1Q9NS26 97 aa6.38□□□□□ -1.39
HDAC8-217ENST00000478743 C6orf226Q5I0X4 101 aa6.37□□□□□ -1.39
HDAC8-217ENST00000478743 Q8IZM0 81 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms