RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 C18orf32Q8TCD1 76 aa6.67□□□□□ -1.34
HDAC6-222ENST00000478095 TMEM141Q96I45 108 aa6.67□□□□□ -1.34
HDAC6-222ENST00000478095 FAM30AQ9NZY2 134 aa6.67□□□□□ -1.34
HDAC6-222ENST00000478095 IGIPA6NJ69 53 aa6.66□□□□□ -1.34
HDAC6-222ENST00000478095 COX7A2LO14548 114 aa6.66□□□□□ -1.34
HDAC6-222ENST00000478095 SCO1O75880 301 aa6.66□□□□□ -1.34
HDAC6-222ENST00000478095 MALP21145 153 aa6.66□□□□□ -1.34
HDAC6-222ENST00000478095 XGP55808 180 aa6.66□□□□□ -1.34
HDAC6-222ENST00000478095 ANKRD39Q53RE8 183 aa6.66□□□□□ -1.34
HDAC6-222ENST00000478095 Q6ZN92 141 aa6.66□□□□□ -1.34
HDAC6-222ENST00000478095 TEX43Q6ZNM6 134 aa6.66□□□□□ -1.34
HDAC6-222ENST00000478095 C5orf38Q86SI9 138 aa6.66□□□□□ -1.34
HDAC6-222ENST00000478095 TOMM6Q96B49 74 aa6.66□□□□□ -1.34
HDAC6-222ENST00000478095 LINC00526Q96FQ7 95 aa6.66□□□□□ -1.34
HDAC6-222ENST00000478095 URB1-AS1Q96HZ7 61 aa6.66□□□□□ -1.34
HDAC6-222ENST00000478095 AP5S1Q9NUS5 200 aa6.66□□□□□ -1.34
HDAC6-222ENST00000478095 HSPG2P98160 4391 aa6.66□□□□□ -1.34
HDAC6-222ENST00000478095 GVQW2A0A096LPI5 108 aaPredicted RBP6.65□□□□□ -1.34
HDAC6-222ENST00000478095 IGHV1-58A0A0C4DH39 117 aa6.65□□□□□ -1.34
HDAC6-222ENST00000478095 LINC01546A6NGU7 62 aa6.65□□□□□ -1.34
HDAC6-222ENST00000478095 SLPIP03973 132 aa6.65□□□□□ -1.34
HDAC6-222ENST00000478095 LINC00173Q6ZV60 143 aa6.65□□□□□ -1.34
HDAC6-222ENST00000478095 SCGB3A1Q96QR1 104 aa6.65□□□□□ -1.34
HDAC6-222ENST00000478095 C2orf88Q9BSF0 95 aa6.65□□□□□ -1.34
HDAC6-222ENST00000478095 TRGC2P03986 189 aa6.64□□□□□ -1.35
HDAC6-222ENST00000478095 G0S2P27469 103 aa6.64□□□□□ -1.35
HDAC6-222ENST00000478095 CNBPP62633 177 aaKnown RBP6.64□□□□□ -1.35
HDAC6-222ENST00000478095 PMCHL1Q16048 86 aa6.64□□□□□ -1.35
HDAC6-222ENST00000478095 TIMM17AQ99595 171 aa6.64□□□□□ -1.35
HDAC6-222ENST00000478095 KRTAP17-1Q9BYP8 105 aa6.64□□□□□ -1.35
HDAC6-222ENST00000478095 KRTAP9-9Q9BYP9 154 aa6.64□□□□□ -1.35
HDAC6-222ENST00000478095 KRTAP9-4Q9BYQ2 154 aa6.64□□□□□ -1.35
HDAC6-222ENST00000478095 VCX2Q9H322 139 aa6.64□□□□□ -1.35
HDAC6-222ENST00000478095 LINC00614P0C842 121 aa6.63□□□□□ -1.35
HDAC6-222ENST00000478095 UBE2D1P51668 147 aa6.63□□□□□ -1.35
HDAC6-222ENST00000478095 COX6A2Q02221 97 aa6.63□□□□□ -1.35
HDAC6-222ENST00000478095 KRTAP19-4Q3LI73 84 aa6.63□□□□□ -1.35
HDAC6-222ENST00000478095 LINC00242Q5T6M2 205 aa6.63□□□□□ -1.35
HDAC6-222ENST00000478095 ERASQ7Z444 233 aa6.63□□□□□ -1.35
HDAC6-222ENST00000478095 C9orf163Q8N9P6 203 aa6.63□□□□□ -1.35
HDAC6-222ENST00000478095 AMELXQ99217 191 aa6.63□□□□□ -1.35
HDAC6-222ENST00000478095 A0A096LNJ9 63 aa6.62□□□□□ -1.35
HDAC6-222ENST00000478095 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.62□□□□□ -1.35
HDAC6-222ENST00000478095 IGHV3OR16-9A0A0B4J2B5 98 aa6.62□□□□□ -1.35
HDAC6-222ENST00000478095 COLCA2A8K830 154 aa6.62□□□□□ -1.35
HDAC6-222ENST00000478095 ZNF561-AS1K7EIQ3 104 aa6.62□□□□□ -1.35
HDAC6-222ENST00000478095 NPSP0C0P6 89 aa6.62□□□□□ -1.35
HDAC6-222ENST00000478095 Q6ZSA8 131 aa6.62□□□□□ -1.35
HDAC6-222ENST00000478095 IGLV4-69A0A075B6H9 119 aa6.61□□□□□ -1.35
HDAC6-222ENST00000478095 HBDP02042 147 aa6.61□□□□□ -1.35
HDAC6-222ENST00000478095 RAB5BP61020 215 aa6.61□□□□□ -1.35
HDAC6-222ENST00000478095 SPAG11BQ08648 103 aa6.61□□□□□ -1.35
HDAC6-222ENST00000478095 PAPPA-AS1Q5QFB9 102 aa6.61□□□□□ -1.35
HDAC6-222ENST00000478095 ORAOV1Q8WV07 137 aa6.61□□□□□ -1.35
HDAC6-222ENST00000478095 IGHV3-64A0A075B6Q5 118 aa6.6□□□□□ -1.35
HDAC6-222ENST00000478095 PANO1I0J062 215 aa6.6□□□□□ -1.35
HDAC6-222ENST00000478095 APOMO95445 188 aa6.6□□□□□ -1.35
HDAC6-222ENST00000478095 SMR3BP02814 79 aaPredicted RBP6.6□□□□□ -1.35
HDAC6-222ENST00000478095 SDIM1Q6ZPB5 146 aa6.6□□□□□ -1.35
HDAC6-222ENST00000478095 SCXQ7RTU7 201 aa6.6□□□□□ -1.35
HDAC6-222ENST00000478095 DNAH8Q96JB1 4490 aa6.59□□□□□ -1.35
HDAC6-222ENST00000478095 A0A087WZ39 114 aa6.59□□□□□ -1.35
HDAC6-222ENST00000478095 A0A0J9YXV3 536 aa6.59□□□□□ -1.35
HDAC6-222ENST00000478095 LINC01549A6NIU2 74 aa6.59□□□□□ -1.35
HDAC6-222ENST00000478095 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.59□□□□□ -1.35
HDAC6-222ENST00000478095 CHTF8P0CG12 524 aa6.59□□□□□ -1.35
HDAC6-222ENST00000478095 LINC00310P59036 64 aa6.59□□□□□ -1.35
HDAC6-222ENST00000478095 SYCNQ0VAF6 134 aa6.59□□□□□ -1.35
HDAC6-222ENST00000478095 Q6ZRU5 148 aa6.59□□□□□ -1.35
HDAC6-222ENST00000478095 BAGE3Q86Y29 109 aa6.59□□□□□ -1.35
HDAC6-222ENST00000478095 CARD19Q96LW7 228 aa6.59□□□□□ -1.35
HDAC6-222ENST00000478095 CAMK2N2Q96S95 79 aa6.59□□□□□ -1.35
HDAC6-222ENST00000478095 KRTAP4-5Q9BYR2 181 aa6.59□□□□□ -1.35
HDAC6-222ENST00000478095 NDUFA6P56556 154 aa6.58□□□□□ -1.36
HDAC6-222ENST00000478095 PDZD11Q5EBL8 140 aa6.58□□□□□ -1.36
HDAC6-222ENST00000478095 Q8N1X5 172 aa6.58□□□□□ -1.36
HDAC6-222ENST00000478095 OR10D4PQ8NGN7 298 aa6.58□□□□□ -1.36
HDAC6-222ENST00000478095 CIRBP-AS1Q8TBR5 109 aa6.58□□□□□ -1.36
HDAC6-222ENST00000478095 CHCHD1Q96BP2 118 aaKnown RBP6.58□□□□□ -1.36
HDAC6-222ENST00000478095 CHAC1Q9BUX1 264 aa6.58□□□□□ -1.36
HDAC6-222ENST00000478095 CST9LQ9H4G1 147 aa6.58□□□□□ -1.36
HDAC6-222ENST00000478095 GEMIN7Q9H840 131 aaKnown RBP6.58□□□□□ -1.36
HDAC6-222ENST00000478095 FAT1Q14517 4588 aa6.58□□□□□ -1.36
HDAC6-222ENST00000478095 PMVKQ15126 192 aa6.57□□□□□ -1.36
HDAC6-222ENST00000478095 FAM19A3Q7Z5A8 133 aa6.57□□□□□ -1.36
HDAC6-222ENST00000478095 LINC00469Q8N7U9 141 aa6.57□□□□□ -1.36
HDAC6-222ENST00000478095 CDKN2A-AS1Q9UH64 79 aa6.57□□□□□ -1.36
HDAC6-222ENST00000478095 IGKV2-24A0A0C4DH68 120 aa6.56□□□□□ -1.36
HDAC6-222ENST00000478095 HSBP1O75506 76 aa6.56□□□□□ -1.36
HDAC6-222ENST00000478095 SERF1AO75920 110 aa6.56□□□□□ -1.36
HDAC6-222ENST00000478095 HERVK_113P63121 156 aa6.56□□□□□ -1.36
HDAC6-222ENST00000478095 SEC11AP67812 179 aa6.56□□□□□ -1.36
HDAC6-222ENST00000478095 FAM19A2Q8N3H0 131 aa6.56□□□□□ -1.36
HDAC6-222ENST00000478095 C2orf48Q96LS8 159 aa6.56□□□□□ -1.36
HDAC6-222ENST00000478095 ABCA13Q86UQ4 5058 aa6.56□□□□□ -1.36
HDAC6-222ENST00000478095 A0A096LNI7 61 aa6.55□□□□□ -1.36
HDAC6-222ENST00000478095 TINCRA0A1B0GVN0 87 aa6.55□□□□□ -1.36
HDAC6-222ENST00000478095 ATP5LO75964 103 aa6.55□□□□□ -1.36
HDAC6-222ENST00000478095 C10orf25Q5T742 122 aa6.55□□□□□ -1.36
HDAC6-222ENST00000478095 Q5VSD8 79 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms