RNA–Protein interactions for RNA: ENST00000477819.1

PTPRN-214, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-214ENST00000477819 ALG5Q9Y673 324 aa4.19□□□□□ -1.74
PTPRN-214ENST00000477819 IGKV2D-26A0A0A0MRZ7 120 aa4.18□□□□□ -1.74
PTPRN-214ENST00000477819 SDHAF1A6NFY7 115 aa4.18□□□□□ -1.74
PTPRN-214ENST00000477819 H0Y8G0 127 aa4.18□□□□□ -1.74
PTPRN-214ENST00000477819 NDUFA1O15239 70 aa4.18□□□□□ -1.74
PTPRN-214ENST00000477819 FP248Q71RG6 208 aaPredicted RBP4.18□□□□□ -1.74
PTPRN-214ENST00000477819 STOML3Q8TAV4 291 aa4.18□□□□□ -1.74
PTPRN-214ENST00000477819 ORAOV1Q8WV07 137 aa4.18□□□□□ -1.74
PTPRN-214ENST00000477819 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
PTPRN-214ENST00000477819 TNFSF18Q9UNG2 199 aa4.18□□□□□ -1.74
PTPRN-214ENST00000477819 CTXND1A0A1B0GTU2 59 aa4.17□□□□□ -1.74
PTPRN-214ENST00000477819 BCE1O60756 84 aa4.17□□□□□ -1.74
PTPRN-214ENST00000477819 TRGC1P0CF51 173 aa4.17□□□□□ -1.74
PTPRN-214ENST00000477819 PMCHP20382 165 aa4.17□□□□□ -1.74
PTPRN-214ENST00000477819 FOXA3P55318 350 aaPredicted RBP4.17□□□□□ -1.74
PTPRN-214ENST00000477819 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
PTPRN-214ENST00000477819 SERF2P84101 59 aa4.17□□□□□ -1.74
PTPRN-214ENST00000477819 FAM229BQ4G0N7 80 aa4.17□□□□□ -1.74
PTPRN-214ENST00000477819 LYZL1Q6UWQ5 148 aa4.17□□□□□ -1.74
PTPRN-214ENST00000477819 C3orf22Q8N5N4 141 aa4.17□□□□□ -1.74
PTPRN-214ENST00000477819 NRACQ8N912 160 aa4.17□□□□□ -1.74
PTPRN-214ENST00000477819 RNASE7Q9H1E1 156 aaKnown RBP4.17□□□□□ -1.74
PTPRN-214ENST00000477819 TMEM242Q9NWH2 141 aa4.17□□□□□ -1.74
PTPRN-214ENST00000477819 C22orf24Q9Y442 160 aa4.17□□□□□ -1.74
PTPRN-214ENST00000477819 FAM240BA0A1B0GVZ2 78 aa4.16□□□□□ -1.74
PTPRN-214ENST00000477819 C5orf52A6NGY3 159 aa4.16□□□□□ -1.74
PTPRN-214ENST00000477819 KRTAP4-16G5E9R7 235 aaPredicted RBP4.16□□□□□ -1.74
PTPRN-214ENST00000477819 I3L3M4 83 aa4.16□□□□□ -1.74
PTPRN-214ENST00000477819 CTRLP40313 264 aa4.16□□□□□ -1.74
PTPRN-214ENST00000477819 TMEM241Q24JQ0 296 aa4.16□□□□□ -1.74
PTPRN-214ENST00000477819 MRPL52Q86TS9 123 aaKnown RBP4.16□□□□□ -1.74
PTPRN-214ENST00000477819 OR10D4PQ8NGN7 298 aa4.16□□□□□ -1.74
PTPRN-214ENST00000477819 OCC1Q8TAD7 63 aa4.16□□□□□ -1.74
PTPRN-214ENST00000477819 MRAP2Q96G30 205 aa4.16□□□□□ -1.74
PTPRN-214ENST00000477819 PET100P0DJ07 73 aa4.15□□□□□ -1.75
PTPRN-214ENST00000477819 FHITP49789 147 aa4.15□□□□□ -1.75
PTPRN-214ENST00000477819 TWIST1Q15672 202 aa4.15□□□□□ -1.75
PTPRN-214ENST00000477819 LINC00469Q8N7U9 141 aa4.15□□□□□ -1.75
PTPRN-214ENST00000477819 VCX2Q9H322 139 aa4.15□□□□□ -1.75
PTPRN-214ENST00000477819 MAP1LC3B2A6NCE7 125 aa4.14□□□□□ -1.75
PTPRN-214ENST00000477819 RPL37AP8A6NKH3 93 aa4.14□□□□□ -1.75
PTPRN-214ENST00000477819 ATP6V1G1O75348 118 aa4.14□□□□□ -1.75
PTPRN-214ENST00000477819 CTAG1AP78358 180 aa4.14□□□□□ -1.75
PTPRN-214ENST00000477819 LBHQ53QV2 105 aaPredicted RBP4.14□□□□□ -1.75
PTPRN-214ENST00000477819 C2orf82Q6UX34 121 aa4.14□□□□□ -1.75
PTPRN-214ENST00000477819 KRTAP13-1Q8IUC0 172 aa4.14□□□□□ -1.75
PTPRN-214ENST00000477819 TCEAL7Q9BRU2 100 aa4.14□□□□□ -1.75
PTPRN-214ENST00000477819 MAP1LC3BQ9GZQ8 125 aa4.14□□□□□ -1.75
PTPRN-214ENST00000477819 NDUFC2-KCTD14E9PQ53 114 aa4.13□□□□□ -1.75
PTPRN-214ENST00000477819 F2Z2F3 143 aa4.13□□□□□ -1.75
PTPRN-214ENST00000477819 RPS20P60866 119 aaKnown RBP4.13□□□□□ -1.75
PTPRN-214ENST00000477819 KIAA0087Q14695 138 aa4.13□□□□□ -1.75
PTPRN-214ENST00000477819 Q6ZUT4 128 aa4.13□□□□□ -1.75
PTPRN-214ENST00000477819 MARVELD1Q9BSK0 173 aa4.13□□□□□ -1.75
PTPRN-214ENST00000477819 XAGE1AQ9HD64 81 aa4.13□□□□□ -1.75
PTPRN-214ENST00000477819 UBE2D4Q9Y2X8 147 aa4.13□□□□□ -1.75
PTPRN-214ENST00000477819 IGLV8-61A0A075B6I0 122 aa4.12□□□□□ -1.75
PTPRN-214ENST00000477819 C7orf77A4D0Y5 90 aa4.12□□□□□ -1.75
PTPRN-214ENST00000477819 IFNA1P01562 189 aa4.12□□□□□ -1.75
PTPRN-214ENST00000477819 UBE2AP49459 152 aa4.12□□□□□ -1.75
PTPRN-214ENST00000477819 PCOTHQ58A44 107 aa4.12□□□□□ -1.75
PTPRN-214ENST00000477819 RPL7L1Q6DKI1 246 aaKnown RBP4.12□□□□□ -1.75
PTPRN-214ENST00000477819 TMUB2Q71RG4 321 aa4.12□□□□□ -1.75
PTPRN-214ENST00000477819 MRPL55Q7Z7F7 128 aaKnown RBP4.12□□□□□ -1.75
PTPRN-214ENST00000477819 CCDC32Q9BV29 185 aa4.12□□□□□ -1.75
PTPRN-214ENST00000477819 CYTL1Q9NRR1 136 aa4.12□□□□□ -1.75
PTPRN-214ENST00000477819 IGKV2D-30A0A075B6S6 120 aa4.11□□□□□ -1.75
PTPRN-214ENST00000477819 IGHV3OR16-9A0A0B4J2B5 98 aa4.11□□□□□ -1.75
PTPRN-214ENST00000477819 A0A1B0GV50 99 aa4.11□□□□□ -1.75
PTPRN-214ENST00000477819 A0A1B0GVG6 124 aa4.11□□□□□ -1.75
PTPRN-214ENST00000477819 SSNA1O43805 119 aa4.11□□□□□ -1.75
PTPRN-214ENST00000477819 RPL35P42766 123 aaKnown RBP4.11□□□□□ -1.75
PTPRN-214ENST00000477819 SPAG11AQ6PDA7 123 aa4.11□□□□□ -1.75
PTPRN-214ENST00000477819 C9orf62Q8N4C0 152 aa4.11□□□□□ -1.75
PTPRN-214ENST00000477819 PACRGQ96M98 296 aaPredicted RBP4.11□□□□□ -1.75
PTPRN-214ENST00000477819 LINC00167Q96N53 147 aa4.11□□□□□ -1.75
PTPRN-214ENST00000477819 ST20Q9HBF5 79 aa4.11□□□□□ -1.75
PTPRN-214ENST00000477819 NDUFA13Q9P0J0 144 aa4.11□□□□□ -1.75
PTPRN-214ENST00000477819 TRBV6-5A0A0K0K1A5 114 aa4.1□□□□□ -1.75
PTPRN-214ENST00000477819 TRBV30A0A0K0K1B3 111 aa4.1□□□□□ -1.75
PTPRN-214ENST00000477819 UPK1BO75841 260 aa4.1□□□□□ -1.75
PTPRN-214ENST00000477819 SUMO2P61956 95 aaKnown RBP4.1□□□□□ -1.75
PTPRN-214ENST00000477819 AKR1C8PQ5T2L2 129 aa4.1□□□□□ -1.75
PTPRN-214ENST00000477819 DAND5Q8N907 189 aa4.1□□□□□ -1.75
PTPRN-214ENST00000477819 RAB19A4D1S5 217 aa4.09□□□□□ -1.75
PTPRN-214ENST00000477819 ZNF727A8MUV8 499 aa4.09□□□□□ -1.75
PTPRN-214ENST00000477819 POLR2KP53803 58 aaKnown RBP4.09□□□□□ -1.75
PTPRN-214ENST00000477819 CENPWQ5EE01 88 aa4.09□□□□□ -1.75
PTPRN-214ENST00000477819 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
PTPRN-214ENST00000477819 TEX261Q6UWH6 196 aa4.09□□□□□ -1.75
PTPRN-214ENST00000477819 FAM104AQ969W3 186 aa4.09□□□□□ -1.75
PTPRN-214ENST00000477819 CNFNQ9BYD5 112 aa4.09□□□□□ -1.75
PTPRN-214ENST00000477819 CSDC2Q9Y534 153 aaKnown RBP4.09□□□□□ -1.75
PTPRN-214ENST00000477819 TRBV27A0A0K0K1C4 114 aa4.08□□□□□ -1.76
PTPRN-214ENST00000477819 PRLHP81277 87 aa4.08□□□□□ -1.76
PTPRN-214ENST00000477819 Q8NBF4 154 aa4.08□□□□□ -1.76
PTPRN-214ENST00000477819 ENKURQ8TC29 256 aa4.08□□□□□ -1.76
PTPRN-214ENST00000477819 TP73-AS1Q9UF72 201 aa4.08□□□□□ -1.76
PTPRN-214ENST00000477819 PFDN1O60925 122 aa4.07□□□□□ -1.76
PTPRN-214ENST00000477819 S100A6P06703 90 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms