RNA–Protein interactions for RNA: ENST00000477590.1

SYCP1-206, Transcript of synaptonemal complex protein 1, humanhuman

TSL 2

Gene SYCP1, Length 800 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-206ENST00000477590 TGP01266 2768 aa-0.88□□□□□ -2.55
SYCP1-206ENST00000477590 SFT2D2O95562 160 aa-0.88□□□□□ -2.55
SYCP1-206ENST00000477590 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.88□□□□□ -2.55
SYCP1-206ENST00000477590 URB1O60287 2271 aaKnown RBP-0.89□□□□□ -2.55
SYCP1-206ENST00000477590 SHROOM2Q13796 1616 aa-0.89□□□□□ -2.55
SYCP1-206ENST00000477590 SSSCA1O60232 199 aa-0.89□□□□□ -2.55
SYCP1-206ENST00000477590 BTG2P78543 158 aa-0.89□□□□□ -2.55
SYCP1-206ENST00000477590 MYOZ3Q8TDC0 251 aa-0.89□□□□□ -2.55
SYCP1-206ENST00000477590 FXYD6Q9H0Q3 95 aa-0.89□□□□□ -2.55
SYCP1-206ENST00000477590 MYH7P12883 1935 aa-0.89□□□□□ -2.55
SYCP1-206ENST00000477590 HERC2O95714 4834 aa-0.9□□□□□ -2.55
SYCP1-206ENST00000477590 POLA1P09884 1462 aaPredicted RBP-0.9□□□□□ -2.55
SYCP1-206ENST00000477590 MRPL54Q6P161 138 aaKnown RBP-0.9□□□□□ -2.55
SYCP1-206ENST00000477590 FAIMQ9NVQ4 179 aa-0.9□□□□□ -2.55
SYCP1-206ENST00000477590 STARD9Q9P2P6 4700 aa-0.9□□□□□ -2.55
SYCP1-206ENST00000477590 SETD2Q9BYW2 2564 aaPredicted RBP-0.91□□□□□ -2.55
SYCP1-206ENST00000477590 NDUFA2O43678 99 aa-0.91□□□□□ -2.56
SYCP1-206ENST00000477590 MGPP08493 103 aa-0.91□□□□□ -2.56
SYCP1-206ENST00000477590 COMMD6Q7Z4G1 85 aa-0.91□□□□□ -2.56
SYCP1-206ENST00000477590 FAM107BQ9H098 131 aa-0.91□□□□□ -2.56
SYCP1-206ENST00000477590 LINC00474Q9P2X8 69 aa-0.91□□□□□ -2.56
SYCP1-206ENST00000477590 USH2AO75445 5202 aa-0.91□□□□□ -2.56
SYCP1-206ENST00000477590 ROBO1Q9Y6N7 1651 aa-0.91□□□□□ -2.56
SYCP1-206ENST00000477590 CREBBPQ92793 2442 aa-0.91□□□□□ -2.56
SYCP1-206ENST00000477590 BTAF1O14981 1849 aa-0.92□□□□□ -2.56
SYCP1-206ENST00000477590 GOLGA4Q13439 2230 aaKnown RBP-0.92□□□□□ -2.56
SYCP1-206ENST00000477590 ZFHX3Q15911 3703 aa-0.92□□□□□ -2.56
SYCP1-206ENST00000477590 PKD1P98161 4303 aa-0.92□□□□□ -2.56
SYCP1-206ENST00000477590 FGF7P21781 194 aa-0.92□□□□□ -2.56
SYCP1-206ENST00000477590 C5orf38Q86SI9 138 aa-0.92□□□□□ -2.56
SYCP1-206ENST00000477590 FOCADQ5VW36 1801 aa-0.92□□□□□ -2.56
SYCP1-206ENST00000477590 RAPGEF6Q8TEU7 1601 aa-0.93□□□□□ -2.56
SYCP1-206ENST00000477590 TULP4Q9NRJ4 1543 aa-0.93□□□□□ -2.56
SYCP1-206ENST00000477590 ARHGEF12Q9NZN5 1544 aa-0.93□□□□□ -2.56
SYCP1-206ENST00000477590 PSME4Q14997 1843 aa-0.93□□□□□ -2.56
SYCP1-206ENST00000477590 LOC100130705A0A1B0GUX0 176 aa-0.93□□□□□ -2.56
SYCP1-206ENST00000477590 DEFB123Q8N688 67 aa-0.93□□□□□ -2.56
SYCP1-206ENST00000477590 UQCR10Q9UDW1 63 aa-0.93□□□□□ -2.56
SYCP1-206ENST00000477590 MBD5Q9P267 1494 aa-0.93□□□□□ -2.56
SYCP1-206ENST00000477590 DNAJC13O75165 2243 aa-0.93□□□□□ -2.56
SYCP1-206ENST00000477590 HMGXB3Q12766 1538 aa-0.94□□□□□ -2.56
SYCP1-206ENST00000477590 LINC00959A0A1B0GUT2 108 aa-0.94□□□□□ -2.56
SYCP1-206ENST00000477590 CHKB-CPT1BH3BT56 60 aa-0.94□□□□□ -2.56
SYCP1-206ENST00000477590 SPINK4O60575 86 aa-0.94□□□□□ -2.56
SYCP1-206ENST00000477590 LCN9Q8WX39 176 aa-0.94□□□□□ -2.56
SYCP1-206ENST00000477590 PCNX1Q96RV3 2341 aa-0.94□□□□□ -2.56
SYCP1-206ENST00000477590 DNAH6Q9C0G6 4158 aa-0.95□□□□□ -2.56
SYCP1-206ENST00000477590 S100A12P80511 92 aa-0.95□□□□□ -2.56
SYCP1-206ENST00000477590 SCN7AQ01118 1682 aa-0.95□□□□□ -2.56
SYCP1-206ENST00000477590 QRICH2Q9H0J4 1663 aa-0.95□□□□□ -2.56
SYCP1-206ENST00000477590 KIAA0556O60303 1618 aa-0.96□□□□□ -2.56
SYCP1-206ENST00000477590 IQSEC2Q5JU85 1478 aa-0.96□□□□□ -2.56
SYCP1-206ENST00000477590 M0R2T5 61 aa-0.96□□□□□ -2.56
SYCP1-206ENST00000477590 TMEM263Q8WUH6 116 aaKnown RBP-0.96□□□□□ -2.56
SYCP1-206ENST00000477590 NXT2Q9NPJ8 142 aaKnown RBP-0.96□□□□□ -2.56
SYCP1-206ENST00000477590 KTN1Q86UP2 1357 aaKnown RBP-0.96□□□□□ -2.56
SYCP1-206ENST00000477590 MYOM1P52179 1685 aa-0.97□□□□□ -2.56
SYCP1-206ENST00000477590 GAPVD1Q14C86 1478 aa-0.97□□□□□ -2.56
SYCP1-206ENST00000477590 AKAIN1P0CW23 69 aa-0.97□□□□□ -2.56
SYCP1-206ENST00000477590 UBA52P62987 128 aaKnown RBP-0.97□□□□□ -2.56
SYCP1-206ENST00000477590 CRIPTQ9P021 101 aa-0.97□□□□□ -2.56
SYCP1-206ENST00000477590 TET3O43151 1660 aa-0.97□□□□□ -2.57
SYCP1-206ENST00000477590 UBR4Q5T4S7 5183 aa-0.98□□□□□ -2.57
SYCP1-206ENST00000477590 SPRR2EP22531 72 aa-0.98□□□□□ -2.57
SYCP1-206ENST00000477590 SPRR2AP35326 72 aa-0.98□□□□□ -2.57
SYCP1-206ENST00000477590 WHAMMP3Q1A5X7 153 aa-0.98□□□□□ -2.57
SYCP1-206ENST00000477590 NBPF19A0A087WUL8 3843 aa-0.99□□□□□ -2.57
SYCP1-206ENST00000477590 TRBV7-4A0A0J9YYF1 115 aa-0.99□□□□□ -2.57
SYCP1-206ENST00000477590 K7EP13 123 aa-0.99□□□□□ -2.57
SYCP1-206ENST00000477590 IGLC1P0CG04 106 aa-0.99□□□□□ -2.57
SYCP1-206ENST00000477590 DEFB105AQ8NG35 78 aa-0.99□□□□□ -2.57
SYCP1-206ENST00000477590 FMN2Q9NZ56 1722 aa-0.99□□□□□ -2.57
SYCP1-206ENST00000477590 MXRA5Q9NR99 2828 aa-0.99□□□□□ -2.57
SYCP1-206ENST00000477590 C10orf113Q5VZT2 155 aa-1□□□□□ -2.57
SYCP1-206ENST00000477590 FDCSPQ8NFU4 85 aa-1□□□□□ -2.57
SYCP1-206ENST00000477590 C1orf54Q8WWF1 131 aa-1□□□□□ -2.57
SYCP1-206ENST00000477590 SPRR4Q96PI1 79 aa-1□□□□□ -2.57
SYCP1-206ENST00000477590 TCHHQ07283 1943 aa-1□□□□□ -2.57
SYCP1-206ENST00000477590 RYR3Q15413 4870 aa-1□□□□□ -2.57
SYCP1-206ENST00000477590 FAT3Q8TDW7 4589 aa-1□□□□□ -2.57
SYCP1-206ENST00000477590 FAM223AQ8IWN6 122 aa-1.01□□□□□ -2.57
SYCP1-206ENST00000477590 ARL2-SNX15V9GYD0 113 aa-1.01□□□□□ -2.57
SYCP1-206ENST00000477590 OOSP1A8MZH6 123 aa-1.02□□□□□ -2.57
SYCP1-206ENST00000477590 C9orf153Q5TBE3 101 aa-1.02□□□□□ -2.57
SYCP1-206ENST00000477590 LINC01600Q96MT4 127 aa-1.02□□□□□ -2.57
SYCP1-206ENST00000477590 MAGI1Q96QZ7 1491 aaPredicted RBP-1.02□□□□□ -2.57
SYCP1-206ENST00000477590 DNAH9Q9NYC9 4486 aa-1.02□□□□□ -2.57
SYCP1-206ENST00000477590 EPG5Q9HCE0 2579 aa-1.02□□□□□ -2.57
SYCP1-206ENST00000477590 NLRP1Q9C000 1473 aa-1.03□□□□□ -2.57
SYCP1-206ENST00000477590 UBE2L5PA0A1B0GUS4 154 aa-1.03□□□□□ -2.57
SYCP1-206ENST00000477590 SYS1-DBNDD2H3BUS1 97 aa-1.03□□□□□ -2.57
SYCP1-206ENST00000477590 HMGN1P05114 100 aa-1.03□□□□□ -2.57
SYCP1-206ENST00000477590 MT4P47944 62 aa-1.03□□□□□ -2.57
SYCP1-206ENST00000477590 UBE2L3P68036 154 aaKnown RBP-1.03□□□□□ -2.57
SYCP1-206ENST00000477590 LELP1Q5T871 98 aa-1.03□□□□□ -2.57
SYCP1-206ENST00000477590 CDC42SE2Q9NRR3 84 aa-1.03□□□□□ -2.57
SYCP1-206ENST00000477590 APLNQ9ULZ1 77 aa-1.03□□□□□ -2.57
SYCP1-206ENST00000477590 MARF1Q9Y4F3 1742 aaKnown RBP-1.03□□□□□ -2.58
SYCP1-206ENST00000477590 SMG6Q86US8 1419 aaKnown RBP-1.04□□□□□ -2.58
SYCP1-206ENST00000477590 SFTA2Q6UW10 78 aa-1.04□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms