RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 J3QKU1 62 aa9.16□□□□□ -0.94
RTFDC1-207ENST00000477573 IGHV4-31P0DP07 118 aa9.16□□□□□ -0.94
RTFDC1-207ENST00000477573 MAPK1IP1LQ8NDC0 245 aa9.16□□□□□ -0.94
RTFDC1-207ENST00000477573 USMG5Q96IX5 58 aa9.16□□□□□ -0.94
RTFDC1-207ENST00000477573 DEFB112Q30KQ8 113 aa9.16□□□□□ -0.94
RTFDC1-207ENST00000477573 A0A0J9YXV3 536 aa9.15□□□□□ -0.94
RTFDC1-207ENST00000477573 ADARB2-AS1A8MUL3 147 aa9.15□□□□□ -0.94
RTFDC1-207ENST00000477573 MPLKIPQ8TAP9 179 aa9.15□□□□□ -0.94
RTFDC1-207ENST00000477573 ZNF580Q9UK33 172 aa9.15□□□□□ -0.94
RTFDC1-207ENST00000477573 CELSR1Q9NYQ6 3014 aa9.15□□□□□ -0.94
RTFDC1-207ENST00000477573 IGHV3-35A0A0C4DH35 117 aa9.14□□□□□ -0.95
RTFDC1-207ENST00000477573 TRBV6-5A0A0K0K1A5 114 aa9.14□□□□□ -0.95
RTFDC1-207ENST00000477573 PF4P02776 101 aa9.14□□□□□ -0.95
RTFDC1-207ENST00000477573 PLA2G2AP14555 144 aa9.14□□□□□ -0.95
RTFDC1-207ENST00000477573 ESRGQ1W209 222 aa9.14□□□□□ -0.95
RTFDC1-207ENST00000477573 FAM218AQ96MZ4 157 aa9.14□□□□□ -0.95
RTFDC1-207ENST00000477573 CSMD2Q7Z408 3487 aa9.14□□□□□ -0.95
RTFDC1-207ENST00000477573 KMT2BQ9UMN6 2715 aaPredicted RBP9.14□□□□□ -0.95
RTFDC1-207ENST00000477573 RMI2Q96E14 147 aa9.14□□□□□ -0.95
RTFDC1-207ENST00000477573 MRPL53Q96EL3 112 aaKnown RBP9.14□□□□□ -0.95
RTFDC1-207ENST00000477573 PHLDA3Q9Y5J5 127 aa9.14□□□□□ -0.95
RTFDC1-207ENST00000477573 LENEPQ9Y5L5 61 aa9.14□□□□□ -0.95
RTFDC1-207ENST00000477573 RNASE4P34096 147 aaKnown RBP9.13□□□□□ -0.95
RTFDC1-207ENST00000477573 DAD1P61803 113 aa9.13□□□□□ -0.95
RTFDC1-207ENST00000477573 SMAD5-AS1Q9Y6J3 95 aa9.13□□□□□ -0.95
RTFDC1-207ENST00000477573 FSHBP01225 129 aa9.13□□□□□ -0.95
RTFDC1-207ENST00000477573 IGHV4-59P01825 116 aa9.13□□□□□ -0.95
RTFDC1-207ENST00000477573 HIST2H2BCQ6DN03 193 aa9.13□□□□□ -0.95
RTFDC1-207ENST00000477573 HIST2H2BDQ6DRA6 164 aa9.13□□□□□ -0.95
RTFDC1-207ENST00000477573 LINC00308Q8TCZ7 52 aa9.13□□□□□ -0.95
RTFDC1-207ENST00000477573 TM2D3Q9BRN9 247 aa9.13□□□□□ -0.95
RTFDC1-207ENST00000477573 Q9UF83 564 aa9.13□□□□□ -0.95
RTFDC1-207ENST00000477573 DOPEY2Q9Y3R5 2298 aa9.12□□□□□ -0.95
RTFDC1-207ENST00000477573 APCP25054 2843 aa9.12□□□□□ -0.95
RTFDC1-207ENST00000477573 C9orf47Q6ZRZ4 202 aa9.12□□□□□ -0.95
RTFDC1-207ENST00000477573 CR1P17927 2039 aa9.12□□□□□ -0.95
RTFDC1-207ENST00000477573 IGHV3OR16-8A0A075B7F1 116 aa9.12□□□□□ -0.95
RTFDC1-207ENST00000477573 ENHOQ6UWT2 76 aa9.12□□□□□ -0.95
RTFDC1-207ENST00000477573 ZFHX3Q15911 3703 aa9.11□□□□□ -0.95
RTFDC1-207ENST00000477573 PRAC2D3DTV9 90 aa9.11□□□□□ -0.95
RTFDC1-207ENST00000477573 IGLV1-40P01703 118 aa9.11□□□□□ -0.95
RTFDC1-207ENST00000477573 SNURFQ9Y675 71 aa9.11□□□□□ -0.95
RTFDC1-207ENST00000477573 IGLV4-3A0A075B6K6 122 aa9.1□□□□□ -0.95
RTFDC1-207ENST00000477573 CLPSL1A2RUU4 121 aa9.1□□□□□ -0.95
RTFDC1-207ENST00000477573 NDUFA4O00483 81 aa9.1□□□□□ -0.95
RTFDC1-207ENST00000477573 NDUFA1O15239 70 aa9.1□□□□□ -0.95
RTFDC1-207ENST00000477573 MIFP14174 115 aa9.1□□□□□ -0.95
RTFDC1-207ENST00000477573 S100A4P26447 101 aaKnown RBP9.1□□□□□ -0.95
RTFDC1-207ENST00000477573 FAM229BQ4G0N7 80 aa9.1□□□□□ -0.95
RTFDC1-207ENST00000477573 Q6YL49 198 aa9.1□□□□□ -0.95
RTFDC1-207ENST00000477573 TENM4Q6N022 2769 aa9.1□□□□□ -0.95
RTFDC1-207ENST00000477573 ZANQ9Y493 2812 aa9.1□□□□□ -0.95
RTFDC1-207ENST00000477573 IGFL4Q6B9Z1 124 aa9.1□□□□□ -0.95
RTFDC1-207ENST00000477573 DYNLRB2Q8TF09 96 aa9.1□□□□□ -0.95
RTFDC1-207ENST00000477573 OPRPNQ99935 248 aaPredicted RBP9.1□□□□□ -0.95
RTFDC1-207ENST00000477573 Q9HAA7 133 aa9.1□□□□□ -0.95
RTFDC1-207ENST00000477573 KIF25-AS1Q9Y6Z4 181 aa9.1□□□□□ -0.95
RTFDC1-207ENST00000477573 LINC00315P59091 139 aa9.09□□□□□ -0.95
RTFDC1-207ENST00000477573 SOSTDC1Q6X4U4 206 aa9.09□□□□□ -0.95
RTFDC1-207ENST00000477573 C6orf223Q8N319 242 aa9.09□□□□□ -0.95
RTFDC1-207ENST00000477573 C20orf203Q8NBC4 194 aa9.09□□□□□ -0.95
RTFDC1-207ENST00000477573 RBM12B-AS1Q9P1G2 102 aa9.09□□□□□ -0.95
RTFDC1-207ENST00000477573 KTN1-AS1Q86SY8 53 aa9.09□□□□□ -0.95
RTFDC1-207ENST00000477573 KRTAP1-3Q8IUG1 177 aa9.09□□□□□ -0.95
RTFDC1-207ENST00000477573 H0YGX0 51 aa9.08□□□□□ -0.96
RTFDC1-207ENST00000477573 ERC2-IT1O76042 136 aa9.08□□□□□ -0.96
RTFDC1-207ENST00000477573 UBL5Q9BZL1 73 aa9.08□□□□□ -0.96
RTFDC1-207ENST00000477573 IGHV3-11P01762 117 aa9.07□□□□□ -0.96
RTFDC1-207ENST00000477573 Q1T7F1 81 aa9.07□□□□□ -0.96
RTFDC1-207ENST00000477573 TRAV21A0A0B4J279 112 aa9.07□□□□□ -0.96
RTFDC1-207ENST00000477573 IGHV3-66A0A0C4DH42 116 aa9.07□□□□□ -0.96
RTFDC1-207ENST00000477573 C9orf129Q5T035 196 aaKnown RBP9.07□□□□□ -0.96
RTFDC1-207ENST00000477573 SUMO4Q6EEV6 95 aa9.07□□□□□ -0.96
RTFDC1-207ENST00000477573 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.07□□□□□ -0.96
RTFDC1-207ENST00000477573 ZNF625Q96I27 306 aaPredicted RBP9.07□□□□□ -0.96
RTFDC1-207ENST00000477573 HELZ2Q9BYK8 2649 aaKnown RBP9.07□□□□□ -0.96
RTFDC1-207ENST00000477573 JMJD7-PLA2G4BH0Y9G9 81 aa9.06□□□□□ -0.96
RTFDC1-207ENST00000477573 TEX15Q9BXT5 2789 aa9.06□□□□□ -0.96
RTFDC1-207ENST00000477573 IGHV3OR16-13A0A075B7E8 117 aa9.06□□□□□ -0.96
RTFDC1-207ENST00000477573 IGHV3-74A0A0B4J1X5 117 aa9.06□□□□□ -0.96
RTFDC1-207ENST00000477573 TRBV7-4A0A0J9YYF1 115 aa9.06□□□□□ -0.96
RTFDC1-207ENST00000477573 PIK3CD-AS1Q5SR53 167 aa9.06□□□□□ -0.96
RTFDC1-207ENST00000477573 WFDC9Q8NEX5 89 aa9.06□□□□□ -0.96
RTFDC1-207ENST00000477573 IGHV3-49A0A0A0MS15 119 aa9.05□□□□□ -0.96
RTFDC1-207ENST00000477573 LYRM9A8MSI8 78 aa9.05□□□□□ -0.96
RTFDC1-207ENST00000477573 NBPF19A0A087WUL8 3843 aa9.04□□□□□ -0.96
RTFDC1-207ENST00000477573 ITPR3Q14573 2671 aa9.04□□□□□ -0.96
RTFDC1-207ENST00000477573 UNQ9165/PRO28630Q6UXU0 137 aa9.04□□□□□ -0.96
RTFDC1-207ENST00000477573 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.04□□□□□ -0.96
RTFDC1-207ENST00000477573 C11orf68Q9H3H3 251 aaKnown RBP9.04□□□□□ -0.96
RTFDC1-207ENST00000477573 CCDC168Q8NDH2 2452 aa9.03□□□□□ -0.96
RTFDC1-207ENST00000477573 MXRA5Q9NR99 2828 aa9.03□□□□□ -0.96
RTFDC1-207ENST00000477573 F6UB75 175 aa9.03□□□□□ -0.96
RTFDC1-207ENST00000477573 K7EMT4 169 aa9.03□□□□□ -0.96
RTFDC1-207ENST00000477573 ZNF702PQ9H963 129 aa9.03□□□□□ -0.96
RTFDC1-207ENST00000477573 NCR3O14931 201 aa9.02□□□□□ -0.97
RTFDC1-207ENST00000477573 CD28P10747 220 aa9.02□□□□□ -0.97
RTFDC1-207ENST00000477573 UBE2E2Q96LR5 201 aa9.02□□□□□ -0.97
RTFDC1-207ENST00000477573 RNASE3P12724 160 aaKnown RBP9.01□□□□□ -0.97
RTFDC1-207ENST00000477573 APOC4P55056 127 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms