RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 CHCHD1Q96BP2 118 aaKnown RBP8.59□□□□□ -1.03
TOP3A-205ENST00000477508 DYNC1H1Q14204 4646 aaKnown RBP8.58□□□□□ -1.04
TOP3A-205ENST00000477508 SCO1O75880 301 aa8.58□□□□□ -1.04
TOP3A-205ENST00000477508 HBDP02042 147 aa8.58□□□□□ -1.04
TOP3A-205ENST00000477508 MALP21145 153 aa8.58□□□□□ -1.04
TOP3A-205ENST00000477508 SEC11AP67812 179 aa8.58□□□□□ -1.04
TOP3A-205ENST00000477508 BAGE3Q86Y29 109 aa8.58□□□□□ -1.04
TOP3A-205ENST00000477508 URB1-AS1Q96HZ7 61 aa8.58□□□□□ -1.04
TOP3A-205ENST00000477508 GVQW2A0A096LPI5 108 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-205ENST00000477508 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-205ENST00000477508 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-205ENST00000477508 APOMO95445 188 aa8.57□□□□□ -1.04
TOP3A-205ENST00000477508 FUSP35637 526 aaKnown RBP eCLIP8.57□□□□□ -1.04
TOP3A-205ENST00000477508 UBE2D1P51668 147 aa8.57□□□□□ -1.04
TOP3A-205ENST00000477508 C15orf56Q8N910 161 aa8.57□□□□□ -1.04
TOP3A-205ENST00000477508 IGHV3OR16-9A0A0B4J2B5 98 aa8.56□□□□□ -1.04
TOP3A-205ENST00000477508 CNBPP62633 177 aaKnown RBP8.56□□□□□ -1.04
TOP3A-205ENST00000477508 LINC00173Q6ZV60 143 aa8.56□□□□□ -1.04
TOP3A-205ENST00000477508 DNAH5Q8TE73 4624 aa8.56□□□□□ -1.04
TOP3A-205ENST00000477508 ATP6V1G1O75348 118 aa8.55□□□□□ -1.04
TOP3A-205ENST00000477508 HSBP1O75506 76 aa8.55□□□□□ -1.04
TOP3A-205ENST00000477508 CDK2AP2O75956 126 aa8.55□□□□□ -1.04
TOP3A-205ENST00000477508 ATP5LO75964 103 aa8.55□□□□□ -1.04
TOP3A-205ENST00000477508 LINC00242Q5T6M2 205 aa8.55□□□□□ -1.04
TOP3A-205ENST00000477508 FAM19A3Q7Z5A8 133 aa8.55□□□□□ -1.04
TOP3A-205ENST00000477508 C5orf38Q86SI9 138 aa8.55□□□□□ -1.04
TOP3A-205ENST00000477508 LRP1BQ9NZR2 4599 aa8.54□□□□□ -1.04
TOP3A-205ENST00000477508 A0A096LNJ9 63 aa8.54□□□□□ -1.04
TOP3A-205ENST00000477508 ZNF561-AS1K7EIQ3 104 aa8.54□□□□□ -1.04
TOP3A-205ENST00000477508 KRTAP10-1P60331 282 aa8.54□□□□□ -1.04
TOP3A-205ENST00000477508 HERVK_113P63121 156 aa8.54□□□□□ -1.04
TOP3A-205ENST00000477508 PMVKQ15126 192 aa8.54□□□□□ -1.04
TOP3A-205ENST00000477508 LINC01561Q8N1V8 128 aa8.54□□□□□ -1.04
TOP3A-205ENST00000477508 C9orf163Q8N9P6 203 aa8.54□□□□□ -1.04
TOP3A-205ENST00000477508 A0A087WZ39 114 aa8.53□□□□□ -1.04
TOP3A-205ENST00000477508 HIGD2BQ4VC39 106 aa8.53□□□□□ -1.04
TOP3A-205ENST00000477508 PDZD11Q5EBL8 140 aa8.53□□□□□ -1.04
TOP3A-205ENST00000477508 ZC2HC1BQ5TFG8 222 aa8.53□□□□□ -1.04
TOP3A-205ENST00000477508 OR10D4PQ8NGN7 298 aa8.53□□□□□ -1.04
TOP3A-205ENST00000477508 CST9LQ9H4G1 147 aa8.53□□□□□ -1.04
TOP3A-205ENST00000477508 GEMIN7Q9H840 131 aaKnown RBP8.53□□□□□ -1.04
TOP3A-205ENST00000477508 IGHV3-64A0A075B6Q5 118 aa8.52□□□□□ -1.05
TOP3A-205ENST00000477508 F8WDY8 70 aa8.52□□□□□ -1.05
TOP3A-205ENST00000477508 PMCHL1Q16048 86 aa8.52□□□□□ -1.05
TOP3A-205ENST00000477508 PKIGQ9Y2B9 76 aa8.52□□□□□ -1.05
TOP3A-205ENST00000477508 TINCRA0A1B0GVN0 87 aa8.51□□□□□ -1.05
TOP3A-205ENST00000477508 COX6A2Q02221 97 aa8.51□□□□□ -1.05
TOP3A-205ENST00000477508 C2orf48Q96LS8 159 aa8.51□□□□□ -1.05
TOP3A-205ENST00000477508 HERC2O95714 4834 aa8.51□□□□□ -1.05
TOP3A-205ENST00000477508 SERF1AO75920 110 aa8.5□□□□□ -1.05
TOP3A-205ENST00000477508 SLPIP03973 132 aa8.5□□□□□ -1.05
TOP3A-205ENST00000477508 A0A0J9YXV3 536 aa8.49□□□□□ -1.05
TOP3A-205ENST00000477508 NDUFA6P56556 154 aa8.49□□□□□ -1.05
TOP3A-205ENST00000477508 SPAG11BQ08648 103 aa8.49□□□□□ -1.05
TOP3A-205ENST00000477508 SYCNQ0VAF6 134 aa8.49□□□□□ -1.05
TOP3A-205ENST00000477508 ORAOV1Q8WV07 137 aa8.49□□□□□ -1.05
TOP3A-205ENST00000477508 IGLV4-69A0A075B6H9 119 aa8.48□□□□□ -1.05
TOP3A-205ENST00000477508 HIST1H2BKO60814 126 aa8.48□□□□□ -1.05
TOP3A-205ENST00000477508 HIST1H2BJP06899 126 aa8.48□□□□□ -1.05
TOP3A-205ENST00000477508 HIST1H2BOP23527 126 aa8.48□□□□□ -1.05
TOP3A-205ENST00000477508 HIST1H2BBP33778 126 aa8.48□□□□□ -1.05
TOP3A-205ENST00000477508 HIST1H2BDP58876 126 aa8.48□□□□□ -1.05
TOP3A-205ENST00000477508 HIST1H2BCP62807 126 aa8.48□□□□□ -1.05
TOP3A-205ENST00000477508 HIST2H2BEQ16778 126 aa8.48□□□□□ -1.05
TOP3A-205ENST00000477508 LINC01620Q4KN68 170 aa8.48□□□□□ -1.05
TOP3A-205ENST00000477508 ANKRD39Q53RE8 183 aa8.48□□□□□ -1.05
TOP3A-205ENST00000477508 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.48□□□□□ -1.05
TOP3A-205ENST00000477508 Q6ZSA8 131 aa8.48□□□□□ -1.05
TOP3A-205ENST00000477508 HIST1H2BHQ93079 126 aa8.48□□□□□ -1.05
TOP3A-205ENST00000477508 IFI27L1Q96BM0 104 aa8.48□□□□□ -1.05
TOP3A-205ENST00000477508 CARD19Q96LW7 228 aa8.48□□□□□ -1.05
TOP3A-205ENST00000477508 PACRGQ96M98 296 aaPredicted RBP8.48□□□□□ -1.05
TOP3A-205ENST00000477508 HIST1H2BNQ99877 126 aa8.48□□□□□ -1.05
TOP3A-205ENST00000477508 HIST1H2BMQ99879 126 aa8.48□□□□□ -1.05
TOP3A-205ENST00000477508 IGLV5-45A0A087WSX0 123 aa8.47□□□□□ -1.05
TOP3A-205ENST00000477508 SDIM1Q6ZPB5 146 aa8.47□□□□□ -1.05
TOP3A-205ENST00000477508 FAM19A2Q8N3H0 131 aa8.47□□□□□ -1.05
TOP3A-205ENST00000477508 LINC00469Q8N7U9 141 aa8.47□□□□□ -1.05
TOP3A-205ENST00000477508 CAMK2N2Q96S95 79 aa8.47□□□□□ -1.05
TOP3A-205ENST00000477508 CDKN2A-AS1Q9UH64 79 aa8.47□□□□□ -1.05
TOP3A-205ENST00000477508 TRAV12-1A0A0B4J245 112 aa8.46□□□□□ -1.06
TOP3A-205ENST00000477508 H3BRM9 83 aa8.46□□□□□ -1.06
TOP3A-205ENST00000477508 LEPROTL1O95214 131 aa8.46□□□□□ -1.06
TOP3A-205ENST00000477508 LINC00310P59036 64 aa8.46□□□□□ -1.06
TOP3A-205ENST00000477508 LINC00526Q96FQ7 95 aa8.46□□□□□ -1.06
TOP3A-205ENST00000477508 HSPB8Q9UJY1 196 aa8.46□□□□□ -1.06
TOP3A-205ENST00000477508 NDUFA1O15239 70 aa8.45□□□□□ -1.06
TOP3A-205ENST00000477508 PRSS2P07478 247 aa8.45□□□□□ -1.06
TOP3A-205ENST00000477508 IGLC3P0DOY3 106 aa8.45□□□□□ -1.06
TOP3A-205ENST00000477508 XGP55808 180 aa8.45□□□□□ -1.06
TOP3A-205ENST00000477508 RNF151Q2KHN1 245 aa8.45□□□□□ -1.06
TOP3A-205ENST00000477508 FAM30AQ9NZY2 134 aa8.45□□□□□ -1.06
TOP3A-205ENST00000477508 CHAC1Q9BUX1 264 aa8.44□□□□□ -1.06
TOP3A-205ENST00000477508 MRPL35Q9NZE8 188 aaKnown RBP8.44□□□□□ -1.06
TOP3A-205ENST00000477508 CHTOPQ9Y3Y2 248 aaKnown RBP8.44□□□□□ -1.06
TOP3A-205ENST00000477508 APOBP04114 4563 aaKnown RBP8.44□□□□□ -1.06
TOP3A-205ENST00000477508 NUPR1O60356 82 aa8.43□□□□□ -1.06
TOP3A-205ENST00000477508 KIAA0087Q14695 138 aa8.43□□□□□ -1.06
TOP3A-205ENST00000477508 C6orf226Q5I0X4 101 aa8.43□□□□□ -1.06
TOP3A-205ENST00000477508 COA6Q5JTJ3 125 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms