RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 RAB4AP20338 218 aa4□□□□□ -1.77
RTFDC1-206ENST00000477485 TAGLN2P37802 199 aaKnown RBP4□□□□□ -1.77
RTFDC1-206ENST00000477485 POLR2KP53803 58 aaKnown RBP4□□□□□ -1.77
RTFDC1-206ENST00000477485 RNF151Q2KHN1 245 aa4□□□□□ -1.77
RTFDC1-206ENST00000477485 C10orf25Q5T742 122 aa4□□□□□ -1.77
RTFDC1-206ENST00000477485 UNQ6190/PRO20217Q6UXQ8 127 aa4□□□□□ -1.77
RTFDC1-206ENST00000477485 FAM210AQ96ND0 272 aa4□□□□□ -1.77
RTFDC1-206ENST00000477485 TMEM191AQ9H0A3 160 aa4□□□□□ -1.77
RTFDC1-206ENST00000477485 C6orf48Q9UBA6 75 aa4□□□□□ -1.77
RTFDC1-206ENST00000477485 TGIF2-C20orf24A0A0A6YYL0 155 aa3.99□□□□□ -1.77
RTFDC1-206ENST00000477485 KRTAP9-6A0A140TA67 174 aa3.99□□□□□ -1.77
RTFDC1-206ENST00000477485 IFITM10A6NMD0 228 aa3.99□□□□□ -1.77
RTFDC1-206ENST00000477485 SUMO2P61956 95 aaKnown RBP3.99□□□□□ -1.77
RTFDC1-206ENST00000477485 RPL39P62891 51 aaKnown RBP3.99□□□□□ -1.77
RTFDC1-206ENST00000477485 CSDC2Q9Y534 153 aaKnown RBP3.99□□□□□ -1.77
RTFDC1-206ENST00000477485 F8WDY8 70 aa3.98□□□□□ -1.77
RTFDC1-206ENST00000477485 PPP1R2P9O14990 202 aa3.98□□□□□ -1.77
RTFDC1-206ENST00000477485 PPP1R17O96001 155 aa3.98□□□□□ -1.77
RTFDC1-206ENST00000477485 HBBP68871 147 aa3.98□□□□□ -1.77
RTFDC1-206ENST00000477485 RIGQ13278 110 aa3.98□□□□□ -1.77
RTFDC1-206ENST00000477485 TMEM241Q24JQ0 296 aa3.98□□□□□ -1.77
RTFDC1-206ENST00000477485 CT83Q5H943 113 aa3.98□□□□□ -1.77
RTFDC1-206ENST00000477485 FAM231DQ6ZW35 169 aa3.98□□□□□ -1.77
RTFDC1-206ENST00000477485 PACRGQ96M98 296 aaPredicted RBP3.98□□□□□ -1.77
RTFDC1-206ENST00000477485 SMDT1Q9H4I9 107 aa3.98□□□□□ -1.77
RTFDC1-206ENST00000477485 BATF3Q9NR55 127 aa3.98□□□□□ -1.77
RTFDC1-206ENST00000477485 TLX1NBP0CAT3 122 aa3.97□□□□□ -1.77
RTFDC1-206ENST00000477485 LINC00469Q8N7U9 141 aa3.97□□□□□ -1.77
RTFDC1-206ENST00000477485 NRACQ8N912 160 aa3.97□□□□□ -1.77
RTFDC1-206ENST00000477485 TYMSOSQ8TAI1 123 aa3.97□□□□□ -1.77
RTFDC1-206ENST00000477485 RETNLBQ9BQ08 111 aa3.97□□□□□ -1.77
RTFDC1-206ENST00000477485 SMIM7Q9BQ49 75 aa3.97□□□□□ -1.77
RTFDC1-206ENST00000477485 TOMM7Q9P0U1 55 aa3.97□□□□□ -1.77
RTFDC1-206ENST00000477485 CARHSP1Q9Y2V2 147 aaKnown RBP3.97□□□□□ -1.77
RTFDC1-206ENST00000477485 TMEM250H0YL14 139 aa3.96□□□□□ -1.78
RTFDC1-206ENST00000477485 ZNF861PO60384 105 aa3.96□□□□□ -1.78
RTFDC1-206ENST00000477485 PRSS2P07478 247 aa3.96□□□□□ -1.78
RTFDC1-206ENST00000477485 CKS2P33552 79 aa3.96□□□□□ -1.78
RTFDC1-206ENST00000477485 MRPL51Q4U2R6 128 aaKnown RBP3.96□□□□□ -1.78
RTFDC1-206ENST00000477485 C9orf129Q5T035 196 aaKnown RBP3.96□□□□□ -1.78
RTFDC1-206ENST00000477485 C2orf82Q6UX34 121 aa3.96□□□□□ -1.78
RTFDC1-206ENST00000477485 TIMM21Q9BVV7 248 aa3.96□□□□□ -1.78
RTFDC1-206ENST00000477485 EIF5A2Q9GZV4 153 aaKnown RBP3.96□□□□□ -1.78
RTFDC1-206ENST00000477485 IGHV3OR16-9A0A0B4J2B5 98 aa3.95□□□□□ -1.78
RTFDC1-206ENST00000477485 TRBV30A0A0K0K1B3 111 aa3.95□□□□□ -1.78
RTFDC1-206ENST00000477485 ZNF727A8MUV8 499 aa3.95□□□□□ -1.78
RTFDC1-206ENST00000477485 NDUFC2-KCTD14E9PQ53 114 aa3.95□□□□□ -1.78
RTFDC1-206ENST00000477485 TCAPO15273 167 aa3.95□□□□□ -1.78
RTFDC1-206ENST00000477485 IFI27P40305 119 aaPredicted RBP3.95□□□□□ -1.78
RTFDC1-206ENST00000477485 LINC01551Q86U37 167 aa3.95□□□□□ -1.78
RTFDC1-206ENST00000477485 KRTAP7-1Q8IUC3 87 aa3.95□□□□□ -1.78
RTFDC1-206ENST00000477485 CTDSP1Q9GZU7 261 aa3.95□□□□□ -1.78
RTFDC1-206ENST00000477485 SPANXA1Q9NS26 97 aa3.95□□□□□ -1.78
RTFDC1-206ENST00000477485 MUC2Q02817 5179 aa3.95□□□□□ -1.78
RTFDC1-206ENST00000477485 A0A087X002 238 aa3.94□□□□□ -1.78
RTFDC1-206ENST00000477485 NUPR1O60356 82 aa3.94□□□□□ -1.78
RTFDC1-206ENST00000477485 TNFRSF6BO95407 300 aa3.94□□□□□ -1.78
RTFDC1-206ENST00000477485 CRYGAP11844 174 aa3.94□□□□□ -1.78
RTFDC1-206ENST00000477485 RPL28P46779 137 aaKnown RBP3.94□□□□□ -1.78
RTFDC1-206ENST00000477485 CKS1BP61024 79 aa3.94□□□□□ -1.78
RTFDC1-206ENST00000477485 LBHQ53QV2 105 aaPredicted RBP3.94□□□□□ -1.78
RTFDC1-206ENST00000477485 FAM104BQ5XKR9 115 aa3.94□□□□□ -1.78
RTFDC1-206ENST00000477485 SLC51BQ86UW2 128 aa3.94□□□□□ -1.78
RTFDC1-206ENST00000477485 C20orf78Q9BR46 151 aa3.94□□□□□ -1.78
RTFDC1-206ENST00000477485 SMIM2Q9BVW6 85 aa3.94□□□□□ -1.78
RTFDC1-206ENST00000477485 XAGE1AQ9HD64 81 aa3.94□□□□□ -1.78
RTFDC1-206ENST00000477485 OSTCQ9NRP0 149 aa3.94□□□□□ -1.78
RTFDC1-206ENST00000477485 NAT8BQ9UHF3 227 aa3.94□□□□□ -1.78
RTFDC1-206ENST00000477485 LINC00862A6NCI5 91 aa3.93□□□□□ -1.78
RTFDC1-206ENST00000477485 D6R8Y8 96 aa3.93□□□□□ -1.78
RTFDC1-206ENST00000477485 RAB5AP20339 215 aa3.93□□□□□ -1.78
RTFDC1-206ENST00000477485 BLOC1S1P78537 153 aa3.93□□□□□ -1.78
RTFDC1-206ENST00000477485 MRPS36P82909 103 aaKnown RBP3.93□□□□□ -1.78
RTFDC1-206ENST00000477485 KIAA0087Q14695 138 aa3.93□□□□□ -1.78
RTFDC1-206ENST00000477485 ADIRFQ15847 76 aa3.93□□□□□ -1.78
RTFDC1-206ENST00000477485 LINC00242Q5T6M2 205 aa3.93□□□□□ -1.78
RTFDC1-206ENST00000477485 ALKAL2Q6UX46 152 aa3.93□□□□□ -1.78
RTFDC1-206ENST00000477485 C2orf88Q9BSF0 95 aa3.93□□□□□ -1.78
RTFDC1-206ENST00000477485 ANAPC11Q9NYG5 84 aa3.93□□□□□ -1.78
RTFDC1-206ENST00000477485 C22orf24Q9Y442 160 aa3.93□□□□□ -1.78
RTFDC1-206ENST00000477485 V9GYV3 84 aa3.93□□□□□ -1.78
RTFDC1-206ENST00000477485 GAGE10A6NGK3 116 aa3.92□□□□□ -1.78
RTFDC1-206ENST00000477485 RPL37AP8A6NKH3 93 aa3.92□□□□□ -1.78
RTFDC1-206ENST00000477485 NPYP01303 97 aa3.92□□□□□ -1.78
RTFDC1-206ENST00000477485 UBE2AP49459 152 aa3.92□□□□□ -1.78
RTFDC1-206ENST00000477485 C6orf226Q5I0X4 101 aa3.92□□□□□ -1.78
RTFDC1-206ENST00000477485 MRPL54Q6P161 138 aaKnown RBP3.92□□□□□ -1.78
RTFDC1-206ENST00000477485 TEX43Q6ZNM6 134 aa3.92□□□□□ -1.78
RTFDC1-206ENST00000477485 LINC00173Q6ZV60 143 aa3.92□□□□□ -1.78
RTFDC1-206ENST00000477485 MRPL55Q7Z7F7 128 aaKnown RBP3.92□□□□□ -1.78
RTFDC1-206ENST00000477485 LINC00304Q8N9R0 145 aa3.92□□□□□ -1.78
RTFDC1-206ENST00000477485 FAM104AQ969W3 186 aa3.92□□□□□ -1.78
RTFDC1-206ENST00000477485 TMEM141Q96I45 108 aa3.92□□□□□ -1.78
RTFDC1-206ENST00000477485 IGLV4-3A0A075B6K6 122 aa3.91□□□□□ -1.78
RTFDC1-206ENST00000477485 TRBV24-1A0A075B6N3 115 aa3.91□□□□□ -1.78
RTFDC1-206ENST00000477485 LOC389332A0A1B0GUA5 103 aa3.91□□□□□ -1.78
RTFDC1-206ENST00000477485 F8W036 122 aa3.91□□□□□ -1.78
RTFDC1-206ENST00000477485 BCE1O60756 84 aa3.91□□□□□ -1.78
RTFDC1-206ENST00000477485 FAM74A3Q4VXF1 159 aa3.91□□□□□ -1.78
RTFDC1-206ENST00000477485 Q6ZN92 141 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms