RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 HIGD2BQ4VC39 106 aa11.53□□□□□ -0.56
SMIM4-202ENST00000476842 LINC00173Q6ZV60 143 aa11.53□□□□□ -0.56
SMIM4-202ENST00000476842 C5orf38Q86SI9 138 aa11.53□□□□□ -0.56
SMIM4-202ENST00000476842 C2orf88Q9BSF0 95 aa11.53□□□□□ -0.56
SMIM4-202ENST00000476842 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.52□□□□□ -0.57
SMIM4-202ENST00000476842 TRGC2P03986 189 aa11.52□□□□□ -0.57
SMIM4-202ENST00000476842 UBE2D1P51668 147 aa11.52□□□□□ -0.57
SMIM4-202ENST00000476842 LINC00242Q5T6M2 205 aa11.52□□□□□ -0.57
SMIM4-202ENST00000476842 ZC2HC1BQ5TFG8 222 aa11.52□□□□□ -0.57
SMIM4-202ENST00000476842 FAM30AQ9NZY2 134 aa11.52□□□□□ -0.57
SMIM4-202ENST00000476842 Q6ZSA8 131 aa11.51□□□□□ -0.57
SMIM4-202ENST00000476842 FAM19A3Q7Z5A8 133 aa11.5□□□□□ -0.57
SMIM4-202ENST00000476842 A0A096LNJ9 63 aa11.49□□□□□ -0.57
SMIM4-202ENST00000476842 ZNF561-AS1K7EIQ3 104 aa11.49□□□□□ -0.57
SMIM4-202ENST00000476842 SCO1O75880 301 aa11.49□□□□□ -0.57
SMIM4-202ENST00000476842 APOMO95445 188 aa11.49□□□□□ -0.57
SMIM4-202ENST00000476842 COX6A2Q02221 97 aa11.49□□□□□ -0.57
SMIM4-202ENST00000476842 SDIM1Q6ZPB5 146 aa11.48□□□□□ -0.57
SMIM4-202ENST00000476842 CHCHD1Q96BP2 118 aaKnown RBP11.48□□□□□ -0.57
SMIM4-202ENST00000476842 IGHV3-64A0A075B6Q5 118 aa11.47□□□□□ -0.57
SMIM4-202ENST00000476842 A0A087WZ39 114 aa11.47□□□□□ -0.57
SMIM4-202ENST00000476842 HBDP02042 147 aa11.47□□□□□ -0.57
SMIM4-202ENST00000476842 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.46□□□□□ -0.57
SMIM4-202ENST00000476842 SEC11AP67812 179 aa11.46□□□□□ -0.57
SMIM4-202ENST00000476842 LINC01561Q8N1V8 128 aa11.46□□□□□ -0.57
SMIM4-202ENST00000476842 OR10D4PQ8NGN7 298 aa11.46□□□□□ -0.57
SMIM4-202ENST00000476842 LINC00526Q96FQ7 95 aa11.46□□□□□ -0.57
SMIM4-202ENST00000476842 IGLV4-69A0A075B6H9 119 aa11.45□□□□□ -0.58
SMIM4-202ENST00000476842 PMCHL1Q16048 86 aa11.45□□□□□ -0.58
SMIM4-202ENST00000476842 PDZD11Q5EBL8 140 aa11.45□□□□□ -0.58
SMIM4-202ENST00000476842 CST9LQ9H4G1 147 aa11.45□□□□□ -0.58
SMIM4-202ENST00000476842 HERVK_113P63121 156 aa11.44□□□□□ -0.58
SMIM4-202ENST00000476842 PMVKQ15126 192 aa11.44□□□□□ -0.58
SMIM4-202ENST00000476842 BAGE3Q86Y29 109 aa11.44□□□□□ -0.58
SMIM4-202ENST00000476842 C2orf48Q96LS8 159 aa11.44□□□□□ -0.58
SMIM4-202ENST00000476842 A0A0J9YXV3 536 aa11.43□□□□□ -0.58
SMIM4-202ENST00000476842 SYCNQ0VAF6 134 aa11.43□□□□□ -0.58
SMIM4-202ENST00000476842 Q8N1X5 172 aa11.43□□□□□ -0.58
SMIM4-202ENST00000476842 ORAOV1Q8WV07 137 aa11.43□□□□□ -0.58
SMIM4-202ENST00000476842 CHAC1Q9BUX1 264 aa11.43□□□□□ -0.58
SMIM4-202ENST00000476842 KRTAP17-1Q9BYP8 105 aa11.43□□□□□ -0.58
SMIM4-202ENST00000476842 F8WDY8 70 aa11.42□□□□□ -0.58
SMIM4-202ENST00000476842 HAMPP81172 84 aa11.42□□□□□ -0.58
SMIM4-202ENST00000476842 SPAG11BQ08648 103 aa11.42□□□□□ -0.58
SMIM4-202ENST00000476842 CARD19Q96LW7 228 aa11.42□□□□□ -0.58
SMIM4-202ENST00000476842 GEMIN7Q9H840 131 aaKnown RBP11.42□□□□□ -0.58
SMIM4-202ENST00000476842 TINCRA0A1B0GVN0 87 aa11.41□□□□□ -0.58
SMIM4-202ENST00000476842 ATP5LO75964 103 aa11.41□□□□□ -0.58
SMIM4-202ENST00000476842 Q6ZRU5 148 aa11.4□□□□□ -0.58
SMIM4-202ENST00000476842 CAMK2N2Q96S95 79 aa11.4□□□□□ -0.58
SMIM4-202ENST00000476842 CDKN2A-AS1Q9UH64 79 aa11.4□□□□□ -0.58
SMIM4-202ENST00000476842 FAT1Q14517 4588 aa11.4□□□□□ -0.58
SMIM4-202ENST00000476842 HSBP1O75506 76 aa11.39□□□□□ -0.59
SMIM4-202ENST00000476842 S100A1P23297 94 aa11.39□□□□□ -0.59
SMIM4-202ENST00000476842 KIAA0087Q14695 138 aa11.39□□□□□ -0.59
SMIM4-202ENST00000476842 SCXQ7RTU7 201 aa11.39□□□□□ -0.59
SMIM4-202ENST00000476842 CIRBP-AS1Q8TBR5 109 aa11.39□□□□□ -0.59
SMIM4-202ENST00000476842 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.39□□□□□ -0.59
SMIM4-202ENST00000476842 SMR3BP02814 79 aaPredicted RBP11.38□□□□□ -0.59
SMIM4-202ENST00000476842 CIRBPQ14011 172 aaKnown RBP11.38□□□□□ -0.59
SMIM4-202ENST00000476842 PKIGQ9Y2B9 76 aa11.38□□□□□ -0.59
SMIM4-202ENST00000476842 IGLV5-45A0A087WSX0 123 aa11.37□□□□□ -0.59
SMIM4-202ENST00000476842 PANO1I0J062 215 aa11.37□□□□□ -0.59
SMIM4-202ENST00000476842 SERF1AO75920 110 aa11.37□□□□□ -0.59
SMIM4-202ENST00000476842 NDUFA6P56556 154 aa11.37□□□□□ -0.59
SMIM4-202ENST00000476842 RNF151Q2KHN1 245 aa11.37□□□□□ -0.59
SMIM4-202ENST00000476842 FAM19A2Q8N3H0 131 aa11.37□□□□□ -0.59
SMIM4-202ENST00000476842 LINC00310P59036 64 aa11.36□□□□□ -0.59
SMIM4-202ENST00000476842 LINC00469Q8N7U9 141 aa11.36□□□□□ -0.59
SMIM4-202ENST00000476842 MRPL35Q9NZE8 188 aaKnown RBP11.36□□□□□ -0.59
SMIM4-202ENST00000476842 NDUFA1O15239 70 aa11.35□□□□□ -0.59
SMIM4-202ENST00000476842 IGLC3P0DOY3 106 aa11.35□□□□□ -0.59
SMIM4-202ENST00000476842 DPH3Q96FX2 82 aa11.35□□□□□ -0.59
SMIM4-202ENST00000476842 PACRGQ96M98 296 aaPredicted RBP11.35□□□□□ -0.59
SMIM4-202ENST00000476842 NUPR1O60356 82 aa11.34□□□□□ -0.59
SMIM4-202ENST00000476842 CHTF8P0CG12 524 aa11.34□□□□□ -0.59
SMIM4-202ENST00000476842 UNQ6190/PRO20217Q6UXQ8 127 aa11.34□□□□□ -0.59
SMIM4-202ENST00000476842 SPACA4Q8TDM5 124 aa11.34□□□□□ -0.59
SMIM4-202ENST00000476842 IFI27L1Q96BM0 104 aa11.34□□□□□ -0.59
SMIM4-202ENST00000476842 KRTAP4-5Q9BYR2 181 aa11.34□□□□□ -0.59
SMIM4-202ENST00000476842 LOC107984640A0A0U1RRK4 108 aa11.33□□□□□ -0.6
SMIM4-202ENST00000476842 HIST1H2BKO60814 126 aa11.33□□□□□ -0.6
SMIM4-202ENST00000476842 ATP6V1G1O75348 118 aa11.33□□□□□ -0.6
SMIM4-202ENST00000476842 HIST1H2BJP06899 126 aa11.33□□□□□ -0.6
SMIM4-202ENST00000476842 PRSS2P07478 247 aa11.33□□□□□ -0.6
SMIM4-202ENST00000476842 HIST1H2BOP23527 126 aa11.33□□□□□ -0.6
SMIM4-202ENST00000476842 HIST1H2BBP33778 126 aa11.33□□□□□ -0.6
SMIM4-202ENST00000476842 HIST1H2BDP58876 126 aa11.33□□□□□ -0.6
SMIM4-202ENST00000476842 HIST1H2BCP62807 126 aa11.33□□□□□ -0.6
SMIM4-202ENST00000476842 HIST2H2BEQ16778 126 aa11.33□□□□□ -0.6
SMIM4-202ENST00000476842 C6orf226Q5I0X4 101 aa11.33□□□□□ -0.6
SMIM4-202ENST00000476842 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.33□□□□□ -0.6
SMIM4-202ENST00000476842 C10orf25Q5T742 122 aa11.33□□□□□ -0.6
SMIM4-202ENST00000476842 Q8IZM0 81 aa11.33□□□□□ -0.6
SMIM4-202ENST00000476842 HIST1H2BHQ93079 126 aa11.33□□□□□ -0.6
SMIM4-202ENST00000476842 HIST1H2BNQ99877 126 aa11.33□□□□□ -0.6
SMIM4-202ENST00000476842 HIST1H2BMQ99879 126 aa11.33□□□□□ -0.6
SMIM4-202ENST00000476842 A0A096LNI7 61 aa11.32□□□□□ -0.6
SMIM4-202ENST00000476842 SMIM1B2RUZ4 78 aa11.32□□□□□ -0.6
SMIM4-202ENST00000476842 EPM2AB3EWF7 344 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms