RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 UNQ6190/PRO20217Q6UXQ8 127 aa6.68□□□□□ -1.34
BRCA1-213ENST00000476777 ORAOV1Q8WV07 137 aa6.68□□□□□ -1.34
BRCA1-213ENST00000476777 SMDT1Q9H4I9 107 aa6.68□□□□□ -1.34
BRCA1-213ENST00000476777 A0A087X002 238 aa6.67□□□□□ -1.34
BRCA1-213ENST00000476777 Q6ZUT4 128 aa6.67□□□□□ -1.34
BRCA1-213ENST00000476777 OCC1Q8TAD7 63 aa6.67□□□□□ -1.34
BRCA1-213ENST00000476777 KRTAP4-9Q9BYQ8 210 aa6.67□□□□□ -1.34
BRCA1-213ENST00000476777 IGHV3OR16-9A0A0B4J2B5 98 aa6.66□□□□□ -1.34
BRCA1-213ENST00000476777 KANTRA0A1W2PQU2 76 aa6.65□□□□□ -1.34
BRCA1-213ENST00000476777 VCYO14598 125 aa6.65□□□□□ -1.34
BRCA1-213ENST00000476777 FCER1GP30273 86 aa6.65□□□□□ -1.34
BRCA1-213ENST00000476777 SMAGPQ0VAQ4 97 aa6.65□□□□□ -1.34
BRCA1-213ENST00000476777 CRCT1Q9UGL9 99 aa6.65□□□□□ -1.34
BRCA1-213ENST00000476777 RAB4AP20338 218 aa6.64□□□□□ -1.35
BRCA1-213ENST00000476777 C9orf129Q5T035 196 aaKnown RBP6.64□□□□□ -1.35
BRCA1-213ENST00000476777 FAM104AQ969W3 186 aa6.64□□□□□ -1.35
BRCA1-213ENST00000476777 RETNLBQ9BQ08 111 aa6.64□□□□□ -1.35
BRCA1-213ENST00000476777 TIMM21Q9BVV7 248 aa6.64□□□□□ -1.35
BRCA1-213ENST00000476777 TMEM191AQ9H0A3 160 aa6.64□□□□□ -1.35
BRCA1-213ENST00000476777 CDIP1Q9H305 208 aa6.64□□□□□ -1.35
BRCA1-213ENST00000476777 HMSDA8MTL9 139 aa6.63□□□□□ -1.35
BRCA1-213ENST00000476777 A8MWL6 223 aa6.63□□□□□ -1.35
BRCA1-213ENST00000476777 TEX46H3BTG2 121 aa6.63□□□□□ -1.35
BRCA1-213ENST00000476777 GHRHP01286 108 aa6.63□□□□□ -1.35
BRCA1-213ENST00000476777 CRYGAP11844 174 aa6.63□□□□□ -1.35
BRCA1-213ENST00000476777 TPRXLQ17RH7 258 aa6.63□□□□□ -1.35
BRCA1-213ENST00000476777 TYMSOSQ8TAI1 123 aa6.63□□□□□ -1.35
BRCA1-213ENST00000476777 SMKR1H3BMG3 65 aa6.62□□□□□ -1.35
BRCA1-213ENST00000476777 GATCO43716 136 aaKnown RBP6.62□□□□□ -1.35
BRCA1-213ENST00000476777 SUMO2P61956 95 aaKnown RBP6.62□□□□□ -1.35
BRCA1-213ENST00000476777 KIAA0087Q14695 138 aa6.62□□□□□ -1.35
BRCA1-213ENST00000476777 AMN1Q8IY45 258 aa6.62□□□□□ -1.35
BRCA1-213ENST00000476777 NRACQ8N912 160 aa6.62□□□□□ -1.35
BRCA1-213ENST00000476777 KIR2DL4Q99706 377 aa6.62□□□□□ -1.35
BRCA1-213ENST00000476777 A0A1B0GUT8 65 aa6.61□□□□□ -1.35
BRCA1-213ENST00000476777 NDUFC2-KCTD14E9PQ53 114 aa6.61□□□□□ -1.35
BRCA1-213ENST00000476777 NUPR1O60356 82 aa6.61□□□□□ -1.35
BRCA1-213ENST00000476777 FAM231DQ6ZW35 169 aa6.61□□□□□ -1.35
BRCA1-213ENST00000476777 BORCS7Q96B45 105 aa6.61□□□□□ -1.35
BRCA1-213ENST00000476777 CTDSP1Q9GZU7 261 aa6.61□□□□□ -1.35
BRCA1-213ENST00000476777 TRBV30A0A0K0K1B3 111 aa6.6□□□□□ -1.35
BRCA1-213ENST00000476777 HIGD1CA8MV81 97 aa6.6□□□□□ -1.35
BRCA1-213ENST00000476777 RPL39P62891 51 aaKnown RBP6.6□□□□□ -1.35
BRCA1-213ENST00000476777 CT83Q5H943 113 aa6.6□□□□□ -1.35
BRCA1-213ENST00000476777 C2orf82Q6UX34 121 aa6.6□□□□□ -1.35
BRCA1-213ENST00000476777 TMEM18Q96B42 140 aa6.6□□□□□ -1.35
BRCA1-213ENST00000476777 IGLV7-46A0A075B6I9 117 aa6.59□□□□□ -1.35
BRCA1-213ENST00000476777 PPP1R17O96001 155 aa6.59□□□□□ -1.35
BRCA1-213ENST00000476777 KRTAP13-2Q52LG2 175 aa6.59□□□□□ -1.35
BRCA1-213ENST00000476777 KRTAP4-2Q9BYR5 136 aa6.59□□□□□ -1.35
BRCA1-213ENST00000476777 ANAPC11Q9NYG5 84 aa6.59□□□□□ -1.35
BRCA1-213ENST00000476777 C22orf24Q9Y442 160 aa6.59□□□□□ -1.35
BRCA1-213ENST00000476777 TAGLN2P37802 199 aaKnown RBP6.58□□□□□ -1.36
BRCA1-213ENST00000476777 RPL28P46779 137 aaKnown RBP6.58□□□□□ -1.36
BRCA1-213ENST00000476777 MRPS36P82909 103 aaKnown RBP6.58□□□□□ -1.36
BRCA1-213ENST00000476777 LCE4AQ5TA78 99 aa6.58□□□□□ -1.36
BRCA1-213ENST00000476777 TGIF2-C20orf24A0A0A6YYL0 155 aa6.57□□□□□ -1.36
BRCA1-213ENST00000476777 IFITM10A6NMD0 228 aa6.57□□□□□ -1.36
BRCA1-213ENST00000476777 PPP1R2P9O14990 202 aa6.57□□□□□ -1.36
BRCA1-213ENST00000476777 HBBP68871 147 aa6.57□□□□□ -1.36
BRCA1-213ENST00000476777 LINC00304Q8N9R0 145 aa6.57□□□□□ -1.36
BRCA1-213ENST00000476777 PACRGQ96M98 296 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-213ENST00000476777 SPANXA1Q9NS26 97 aa6.57□□□□□ -1.36
BRCA1-213ENST00000476777 BCE1O60756 84 aa6.56□□□□□ -1.36
BRCA1-213ENST00000476777 LBHQ53QV2 105 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-213ENST00000476777 LINC00173Q6ZV60 143 aa6.56□□□□□ -1.36
BRCA1-213ENST00000476777 ZNF727A8MUV8 499 aa6.55□□□□□ -1.36
BRCA1-213ENST00000476777 LINC01547P58512 204 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-213ENST00000476777 RPL32P62910 135 aaKnown RBP6.55□□□□□ -1.36
BRCA1-213ENST00000476777 LINC00242Q5T6M2 205 aa6.55□□□□□ -1.36
BRCA1-213ENST00000476777 LINC00469Q8N7U9 141 aa6.55□□□□□ -1.36
BRCA1-213ENST00000476777 C20orf78Q9BR46 151 aa6.55□□□□□ -1.36
BRCA1-213ENST00000476777 TRBV24-1A0A075B6N3 115 aa6.54□□□□□ -1.36
BRCA1-213ENST00000476777 TMEM250H0YL14 139 aa6.54□□□□□ -1.36
BRCA1-213ENST00000476777 TCAPO15273 167 aa6.54□□□□□ -1.36
BRCA1-213ENST00000476777 RIGQ13278 110 aa6.54□□□□□ -1.36
BRCA1-213ENST00000476777 MRPL51Q4U2R6 128 aaKnown RBP6.54□□□□□ -1.36
BRCA1-213ENST00000476777 PPDPFQ9H3Y8 114 aa6.54□□□□□ -1.36
BRCA1-213ENST00000476777 XAGE1AQ9HD64 81 aa6.54□□□□□ -1.36
BRCA1-213ENST00000476777 TP73-AS1Q9UF72 201 aa6.54□□□□□ -1.36
BRCA1-213ENST00000476777 FAM229BQ4G0N7 80 aa6.53□□□□□ -1.36
BRCA1-213ENST00000476777 FAM104BQ5XKR9 115 aa6.53□□□□□ -1.36
BRCA1-213ENST00000476777 MRPL55Q7Z7F7 128 aaKnown RBP6.53□□□□□ -1.36
BRCA1-213ENST00000476777 LINC00862A6NCI5 91 aa6.52□□□□□ -1.37
BRCA1-213ENST00000476777 KRTAP13-1Q8IUC0 172 aa6.52□□□□□ -1.37
BRCA1-213ENST00000476777 TNFRSF6BO95407 300 aa6.51□□□□□ -1.37
BRCA1-213ENST00000476777 CTAG1AP78358 180 aa6.51□□□□□ -1.37
BRCA1-213ENST00000476777 RGS21Q2M5E4 152 aa6.51□□□□□ -1.37
BRCA1-213ENST00000476777 LINC01551Q86U37 167 aa6.51□□□□□ -1.37
BRCA1-213ENST00000476777 LINC01561Q8N1V8 128 aa6.51□□□□□ -1.37
BRCA1-213ENST00000476777 SMIM2Q9BVW6 85 aa6.51□□□□□ -1.37
BRCA1-213ENST00000476777 KRTAP4-1Q9BYQ7 146 aa6.51□□□□□ -1.37
BRCA1-213ENST00000476777 OSTCQ9NRP0 149 aa6.51□□□□□ -1.37
BRCA1-213ENST00000476777 RPL37AP8A6NKH3 93 aa6.5□□□□□ -1.37
BRCA1-213ENST00000476777 CKS2P33552 79 aa6.5□□□□□ -1.37
BRCA1-213ENST00000476777 CEBPGP53567 150 aa6.5□□□□□ -1.37
BRCA1-213ENST00000476777 LINC00167Q96N53 147 aa6.5□□□□□ -1.37
BRCA1-213ENST00000476777 IGLV4-3A0A075B6K6 122 aa6.49□□□□□ -1.37
BRCA1-213ENST00000476777 PRSS2P07478 247 aa6.49□□□□□ -1.37
BRCA1-213ENST00000476777 IFI27P40305 119 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms