RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 IGHV4-61A0A0C4DH41 118 aa8.65□□□□□ -1.02
U2AF1-209ENST00000475639 NRACQ8N912 160 aa8.65□□□□□ -1.02
U2AF1-209ENST00000475639 CSMD1Q96PZ7 3565 aa8.65□□□□□ -1.02
U2AF1-209ENST00000475639 PRR4Q16378 134 aa8.65□□□□□ -1.03
U2AF1-209ENST00000475639 FAM215AQ9Y5M1 114 aa8.65□□□□□ -1.03
U2AF1-209ENST00000475639 IMUPQ9GZP8 106 aa8.65□□□□□ -1.03
U2AF1-209ENST00000475639 ACANP16112 2415 aa8.65□□□□□ -1.03
U2AF1-209ENST00000475639 REG3AQ06141 175 aa8.64□□□□□ -1.03
U2AF1-209ENST00000475639 CSDC2Q9Y534 153 aaKnown RBP8.64□□□□□ -1.03
U2AF1-209ENST00000475639 A0A0J9YWU9 116 aa8.64□□□□□ -1.03
U2AF1-209ENST00000475639 TMEM89A2RUT3 159 aa8.64□□□□□ -1.03
U2AF1-209ENST00000475639 IBA57-AS1B1ANH7 110 aa8.64□□□□□ -1.03
U2AF1-209ENST00000475639 SMIM26A0A096LP01 95 aa8.64□□□□□ -1.03
U2AF1-209ENST00000475639 WFDC13Q8IUB5 93 aa8.64□□□□□ -1.03
U2AF1-209ENST00000475639 ZFAND2AQ8N6M9 145 aa8.64□□□□□ -1.03
U2AF1-209ENST00000475639 TRBV27A0A0K0K1C4 114 aa8.63□□□□□ -1.03
U2AF1-209ENST00000475639 NRGNQ92686 78 aa8.63□□□□□ -1.03
U2AF1-209ENST00000475639 TNRC18O15417 2968 aaPredicted RBP8.63□□□□□ -1.03
U2AF1-209ENST00000475639 DMXL2Q8TDJ6 3036 aa8.63□□□□□ -1.03
U2AF1-209ENST00000475639 A0A0J9YX75 114 aa8.63□□□□□ -1.03
U2AF1-209ENST00000475639 NEXN-AS1Q8NBZ9 246 aa8.63□□□□□ -1.03
U2AF1-209ENST00000475639 NDUFA7O95182 113 aa8.63□□□□□ -1.03
U2AF1-209ENST00000475639 DEFB113Q30KQ7 82 aa8.63□□□□□ -1.03
U2AF1-209ENST00000475639 LINC00269Q8N2A0 174 aa8.63□□□□□ -1.03
U2AF1-209ENST00000475639 LOC400499M0QZD8 3231 aa8.63□□□□□ -1.03
U2AF1-209ENST00000475639 C6orf99Q4VX62 202 aa8.63□□□□□ -1.03
U2AF1-209ENST00000475639 Q6ZS46 218 aa8.63□□□□□ -1.03
U2AF1-209ENST00000475639 PMAIP1Q13794 54 aa8.62□□□□□ -1.03
U2AF1-209ENST00000475639 C11orf45Q8TAV5 145 aa8.62□□□□□ -1.03
U2AF1-209ENST00000475639 CDKN2A-AS1Q9UH64 79 aa8.62□□□□□ -1.03
U2AF1-209ENST00000475639 IGHV4-38-2P0DP08 117 aa8.62□□□□□ -1.03
U2AF1-209ENST00000475639 FAM222AQ5U5X8 452 aa8.62□□□□□ -1.03
U2AF1-209ENST00000475639 C7orf33Q8WU49 177 aa8.62□□□□□ -1.03
U2AF1-209ENST00000475639 CEMP1Q6PRD7 247 aaPredicted RBP8.62□□□□□ -1.03
U2AF1-209ENST00000475639 PIK3CD-AS1Q5SR53 167 aa8.61□□□□□ -1.03
U2AF1-209ENST00000475639 CHCHD10Q8WYQ3 142 aaPredicted RBP8.61□□□□□ -1.03
U2AF1-209ENST00000475639 XAGE1AQ9HD64 81 aa8.61□□□□□ -1.03
U2AF1-209ENST00000475639 MTORP42345 2549 aa8.61□□□□□ -1.03
U2AF1-209ENST00000475639 LINC00694P0DN24 101 aa8.61□□□□□ -1.03
U2AF1-209ENST00000475639 LRRK2Q5S007 2527 aa8.6□□□□□ -1.03
U2AF1-209ENST00000475639 EIF4EBP3O60516 100 aaPredicted RBP8.6□□□□□ -1.03
U2AF1-209ENST00000475639 SLPIP03973 132 aa8.6□□□□□ -1.03
U2AF1-209ENST00000475639 C3orf84H3BNL1 204 aa8.6□□□□□ -1.03
U2AF1-209ENST00000475639 SYCNQ0VAF6 134 aa8.6□□□□□ -1.03
U2AF1-209ENST00000475639 SNURFQ9Y675 71 aa8.6□□□□□ -1.03
U2AF1-209ENST00000475639 LOC107984640A0A0U1RRK4 108 aa8.6□□□□□ -1.03
U2AF1-209ENST00000475639 C5orf56Q8N8D9 126 aa8.6□□□□□ -1.03
U2AF1-209ENST00000475639 LINC00308Q8TCZ7 52 aa8.6□□□□□ -1.03
U2AF1-209ENST00000475639 SIRPDQ9H106 197 aa8.6□□□□□ -1.03
U2AF1-209ENST00000475639 UBE2D4Q9Y2X8 147 aa8.59□□□□□ -1.03
U2AF1-209ENST00000475639 Q6ZQY7 126 aa8.59□□□□□ -1.03
U2AF1-209ENST00000475639 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.59□□□□□ -1.03
U2AF1-209ENST00000475639 COX7CP15954 63 aa8.59□□□□□ -1.04
U2AF1-209ENST00000475639 SETD2Q9BYW2 2564 aaPredicted RBP8.58□□□□□ -1.04
U2AF1-209ENST00000475639 TRBV30A0A0K0K1B3 111 aa8.58□□□□□ -1.04
U2AF1-209ENST00000475639 RETNQ9HD89 108 aa8.58□□□□□ -1.04
U2AF1-209ENST00000475639 SMIM9A6NGZ8 99 aa8.58□□□□□ -1.04
U2AF1-209ENST00000475639 LY6LH3BQJ8 138 aa8.57□□□□□ -1.04
U2AF1-209ENST00000475639 CRYGDP07320 174 aa8.57□□□□□ -1.04
U2AF1-209ENST00000475639 DEFB1P60022 68 aa8.57□□□□□ -1.04
U2AF1-209ENST00000475639 ZNF706Q9Y5V0 76 aaPredicted RBP8.57□□□□□ -1.04
U2AF1-209ENST00000475639 TSPEAR-AS2P59090 65 aa8.57□□□□□ -1.04
U2AF1-209ENST00000475639 ARHGAP32A7KAX9 2087 aa8.57□□□□□ -1.04
U2AF1-209ENST00000475639 P0DMU3 169 aa8.57□□□□□ -1.04
U2AF1-209ENST00000475639 FAM231AP0DMU4 169 aa8.57□□□□□ -1.04
U2AF1-209ENST00000475639 FAM231CP0DMU5 169 aa8.57□□□□□ -1.04
U2AF1-209ENST00000475639 Q6ZTI0 123 aa8.57□□□□□ -1.04
U2AF1-209ENST00000475639 C11orf21Q9P2W6 132 aa8.57□□□□□ -1.04
U2AF1-209ENST00000475639 TACC2O95359 2948 aa8.57□□□□□ -1.04
U2AF1-209ENST00000475639 MGAQ8IWI9 3026 aa8.56□□□□□ -1.04
U2AF1-209ENST00000475639 H7C423 109 aa8.56□□□□□ -1.04
U2AF1-209ENST00000475639 LINC01600Q96MT4 127 aa8.56□□□□□ -1.04
U2AF1-209ENST00000475639 ZNF22P17026 224 aaPredicted RBP8.56□□□□□ -1.04
U2AF1-209ENST00000475639 Q6ZVQ6 151 aa8.56□□□□□ -1.04
U2AF1-209ENST00000475639 TRIAP1O43715 76 aa8.56□□□□□ -1.04
U2AF1-209ENST00000475639 DHRS4-AS1Q9P1J3 65 aa8.56□□□□□ -1.04
U2AF1-209ENST00000475639 MRPS36P82909 103 aaKnown RBP8.55□□□□□ -1.04
U2AF1-209ENST00000475639 FAM19A5Q7Z5A7 132 aaPredicted RBP8.55□□□□□ -1.04
U2AF1-209ENST00000475639 DEFB131BA0A096LNP1 70 aa8.55□□□□□ -1.04
U2AF1-209ENST00000475639 PRYO14603 147 aa8.55□□□□□ -1.04
U2AF1-209ENST00000475639 IGLV1-47P01700 117 aa8.55□□□□□ -1.04
U2AF1-209ENST00000475639 IGHV4-30-4P0DP06 118 aa8.55□□□□□ -1.04
U2AF1-209ENST00000475639 IGHV4-31P0DP07 118 aa8.55□□□□□ -1.04
U2AF1-209ENST00000475639 IGLV4-69A0A075B6H9 119 aa8.54□□□□□ -1.04
U2AF1-209ENST00000475639 TRBV7-7A0A0K0K1E9 115 aa8.54□□□□□ -1.04
U2AF1-209ENST00000475639 LRRC75A-AS1Q8N1F1 130 aa8.54□□□□□ -1.04
U2AF1-209ENST00000475639 MAP6D1Q9H9H5 199 aa8.54□□□□□ -1.04
U2AF1-209ENST00000475639 TMEM223A0PJW6 202 aa8.54□□□□□ -1.04
U2AF1-209ENST00000475639 AMELXQ99217 191 aa8.54□□□□□ -1.04
U2AF1-209ENST00000475639 ABCA12Q86UK0 2595 aa8.54□□□□□ -1.04
U2AF1-209ENST00000475639 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.54□□□□□ -1.04
U2AF1-209ENST00000475639 C4orf3Q8WVX3 66 aa8.54□□□□□ -1.04
U2AF1-209ENST00000475639 USP9XQ93008 2570 aaPredicted RBP8.53□□□□□ -1.04
U2AF1-209ENST00000475639 CHD8Q9HCK8 2581 aa8.53□□□□□ -1.04
U2AF1-209ENST00000475639 MIFP14174 115 aa8.53□□□□□ -1.04
U2AF1-209ENST00000475639 GRNP28799 593 aaKnown RBP8.53□□□□□ -1.04
U2AF1-209ENST00000475639 HILS1P60008 231 aa8.53□□□□□ -1.04
U2AF1-209ENST00000475639 UNQ9165/PRO28630Q6UXU0 137 aa8.53□□□□□ -1.04
U2AF1-209ENST00000475639 POM121L12Q8N7R1 296 aa8.53□□□□□ -1.04
U2AF1-209ENST00000475639 LINC00467Q9BRT7 94 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms