RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 UBE2D1P51668 147 aa10.99□□□□□ -0.65
SCAF11-206ENST00000474828 RAB5BP61020 215 aa10.99□□□□□ -0.65
SCAF11-206ENST00000474828 C4orf48Q5BLP8 95 aa10.99□□□□□ -0.65
SCAF11-206ENST00000474828 PAPPA-AS1Q5QFB9 102 aa10.99□□□□□ -0.65
SCAF11-206ENST00000474828 Q6ZSA8 131 aa10.99□□□□□ -0.65
SCAF11-206ENST00000474828 IGHV1-58A0A0C4DH39 117 aa10.98□□□□□ -0.65
SCAF11-206ENST00000474828 LINC00242Q5T6M2 205 aa10.98□□□□□ -0.65
SCAF11-206ENST00000474828 TEX43Q6ZNM6 134 aa10.98□□□□□ -0.65
SCAF11-206ENST00000474828 C9orf163Q8N9P6 203 aa10.98□□□□□ -0.65
SCAF11-206ENST00000474828 COX7A2LO14548 114 aa10.97□□□□□ -0.65
SCAF11-206ENST00000474828 Q6ZN92 141 aa10.97□□□□□ -0.65
SCAF11-206ENST00000474828 CHCHD1Q96BP2 118 aaKnown RBP10.97□□□□□ -0.65
SCAF11-206ENST00000474828 VCX2Q9H322 139 aa10.97□□□□□ -0.65
SCAF11-206ENST00000474828 SCO1O75880 301 aa10.96□□□□□ -0.65
SCAF11-206ENST00000474828 PDZD11Q5EBL8 140 aa10.96□□□□□ -0.65
SCAF11-206ENST00000474828 SCGB3A1Q96QR1 104 aa10.96□□□□□ -0.65
SCAF11-206ENST00000474828 hDV102S1A0JD36 115 aa10.95□□□□□ -0.66
SCAF11-206ENST00000474828 XGP55808 180 aa10.95□□□□□ -0.66
SCAF11-206ENST00000474828 LINC01561Q8N1V8 128 aa10.95□□□□□ -0.66
SCAF11-206ENST00000474828 C2orf88Q9BSF0 95 aa10.95□□□□□ -0.66
SCAF11-206ENST00000474828 A0A087WZ39 114 aa10.94□□□□□ -0.66
SCAF11-206ENST00000474828 HBDP02042 147 aa10.94□□□□□ -0.66
SCAF11-206ENST00000474828 ZC2HC1BQ5TFG8 222 aa10.94□□□□□ -0.66
SCAF11-206ENST00000474828 COX6A2Q02221 97 aa10.93□□□□□ -0.66
SCAF11-206ENST00000474828 IGHV3-64A0A075B6Q5 118 aa10.92□□□□□ -0.66
SCAF11-206ENST00000474828 S100A1P23297 94 aa10.92□□□□□ -0.66
SCAF11-206ENST00000474828 LINC00310P59036 64 aa10.92□□□□□ -0.66
SCAF11-206ENST00000474828 SDIM1Q6ZPB5 146 aa10.92□□□□□ -0.66
SCAF11-206ENST00000474828 C5orf38Q86SI9 138 aa10.92□□□□□ -0.66
SCAF11-206ENST00000474828 OR10D4PQ8NGN7 298 aa10.92□□□□□ -0.66
SCAF11-206ENST00000474828 CST9LQ9H4G1 147 aa10.92□□□□□ -0.66
SCAF11-206ENST00000474828 FAM30AQ9NZY2 134 aa10.92□□□□□ -0.66
SCAF11-206ENST00000474828 SEC11AP67812 179 aa10.91□□□□□ -0.66
SCAF11-206ENST00000474828 IGLV5-45A0A087WSX0 123 aa10.9□□□□□ -0.66
SCAF11-206ENST00000474828 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.9□□□□□ -0.66
SCAF11-206ENST00000474828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.9□□□□□ -0.66
SCAF11-206ENST00000474828 APOMO95445 188 aa10.9□□□□□ -0.66
SCAF11-206ENST00000474828 PMVKQ15126 192 aa10.9□□□□□ -0.66
SCAF11-206ENST00000474828 LINC01620Q4KN68 170 aa10.9□□□□□ -0.66
SCAF11-206ENST00000474828 HIGD2BQ4VC39 106 aa10.9□□□□□ -0.66
SCAF11-206ENST00000474828 C2orf48Q96LS8 159 aa10.9□□□□□ -0.66
SCAF11-206ENST00000474828 F8WDY8 70 aa10.89□□□□□ -0.67
SCAF11-206ENST00000474828 MALP21145 153 aa10.89□□□□□ -0.67
SCAF11-206ENST00000474828 CIRBPQ14011 172 aaKnown RBP10.89□□□□□ -0.67
SCAF11-206ENST00000474828 TINCRA0A1B0GVN0 87 aa10.88□□□□□ -0.67
SCAF11-206ENST00000474828 ATP5LO75964 103 aa10.88□□□□□ -0.67
SCAF11-206ENST00000474828 HERVK_113P63121 156 aa10.88□□□□□ -0.67
SCAF11-206ENST00000474828 KIAA0087Q14695 138 aa10.88□□□□□ -0.67
SCAF11-206ENST00000474828 PMCHL1Q16048 86 aa10.88□□□□□ -0.67
SCAF11-206ENST00000474828 KRTAP4-5Q9BYR2 181 aa10.88□□□□□ -0.67
SCAF11-206ENST00000474828 ZNF561-AS1K7EIQ3 104 aa10.87□□□□□ -0.67
SCAF11-206ENST00000474828 ATP6V1G1O75348 118 aa10.87□□□□□ -0.67
SCAF11-206ENST00000474828 BAGE3Q86Y29 109 aa10.87□□□□□ -0.67
SCAF11-206ENST00000474828 FAT1Q14517 4588 aa10.87□□□□□ -0.67
SCAF11-206ENST00000474828 IGLV4-69A0A075B6H9 119 aa10.86□□□□□ -0.67
SCAF11-206ENST00000474828 A0A0J9YXV3 536 aa10.86□□□□□ -0.67
SCAF11-206ENST00000474828 HIST1H2BKO60814 126 aa10.85□□□□□ -0.67
SCAF11-206ENST00000474828 HSBP1O75506 76 aa10.85□□□□□ -0.67
SCAF11-206ENST00000474828 SERF1AO75920 110 aa10.85□□□□□ -0.67
SCAF11-206ENST00000474828 HIST1H2BJP06899 126 aa10.85□□□□□ -0.67
SCAF11-206ENST00000474828 HIST1H2BOP23527 126 aa10.85□□□□□ -0.67
SCAF11-206ENST00000474828 HIST1H2BBP33778 126 aa10.85□□□□□ -0.67
SCAF11-206ENST00000474828 HIST1H2BDP58876 126 aa10.85□□□□□ -0.67
SCAF11-206ENST00000474828 HIST1H2BCP62807 126 aa10.85□□□□□ -0.67
SCAF11-206ENST00000474828 SYCNQ0VAF6 134 aa10.85□□□□□ -0.67
SCAF11-206ENST00000474828 HIST2H2BEQ16778 126 aa10.85□□□□□ -0.67
SCAF11-206ENST00000474828 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.85□□□□□ -0.67
SCAF11-206ENST00000474828 HIST1H2BHQ93079 126 aa10.85□□□□□ -0.67
SCAF11-206ENST00000474828 LINC00526Q96FQ7 95 aa10.85□□□□□ -0.67
SCAF11-206ENST00000474828 HIST1H2BNQ99877 126 aa10.85□□□□□ -0.67
SCAF11-206ENST00000474828 HIST1H2BMQ99879 126 aa10.85□□□□□ -0.67
SCAF11-206ENST00000474828 CHAC1Q9BUX1 264 aa10.85□□□□□ -0.67
SCAF11-206ENST00000474828 CDKN2A-AS1Q9UH64 79 aa10.85□□□□□ -0.67
SCAF11-206ENST00000474828 IGLC3P0DOY3 106 aa10.84□□□□□ -0.67
SCAF11-206ENST00000474828 SPAG11BQ08648 103 aa10.84□□□□□ -0.67
SCAF11-206ENST00000474828 RNF151Q2KHN1 245 aa10.84□□□□□ -0.67
SCAF11-206ENST00000474828 ORAOV1Q8WV07 137 aa10.84□□□□□ -0.67
SCAF11-206ENST00000474828 NUPR1O60356 82 aa10.83□□□□□ -0.68
SCAF11-206ENST00000474828 CARD19Q96LW7 228 aa10.83□□□□□ -0.68
SCAF11-206ENST00000474828 TRAV12-1A0A0B4J245 112 aa10.82□□□□□ -0.68
SCAF11-206ENST00000474828 Q6ZRU5 148 aa10.82□□□□□ -0.68
SCAF11-206ENST00000474828 Q8N1X5 172 aa10.82□□□□□ -0.68
SCAF11-206ENST00000474828 GEMIN7Q9H840 131 aaKnown RBP10.82□□□□□ -0.68
SCAF11-206ENST00000474828 MRPL35Q9NZE8 188 aaKnown RBP10.82□□□□□ -0.68
SCAF11-206ENST00000474828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.82□□□□□ -0.68
SCAF11-206ENST00000474828 PANO1I0J062 215 aa10.81□□□□□ -0.68
SCAF11-206ENST00000474828 COA6Q5JTJ3 125 aaKnown RBP10.81□□□□□ -0.68
SCAF11-206ENST00000474828 SCXQ7RTU7 201 aa10.81□□□□□ -0.68
SCAF11-206ENST00000474828 FAM19A2Q8N3H0 131 aa10.81□□□□□ -0.68
SCAF11-206ENST00000474828 IFI27L1Q96BM0 104 aa10.81□□□□□ -0.68
SCAF11-206ENST00000474828 PKIGQ9Y2B9 76 aa10.81□□□□□ -0.68
SCAF11-206ENST00000474828 SMIM1B2RUZ4 78 aa10.8□□□□□ -0.68
SCAF11-206ENST00000474828 Q8IZM0 81 aa10.8□□□□□ -0.68
SCAF11-206ENST00000474828 CIRBP-AS1Q8TBR5 109 aa10.8□□□□□ -0.68
SCAF11-206ENST00000474828 CAMK2N2Q96S95 79 aa10.8□□□□□ -0.68
SCAF11-206ENST00000474828 SPACA4Q8TDM5 124 aa10.79□□□□□ -0.68
SCAF11-206ENST00000474828 VPS13BQ7Z7G8 4022 aa10.79□□□□□ -0.68
SCAF11-206ENST00000474828 ABCA13Q86UQ4 5058 aa10.78□□□□□ -0.68
SCAF11-206ENST00000474828 EPM2AB3EWF7 344 aa10.78□□□□□ -0.68
SCAF11-206ENST00000474828 TLX1NBP0CAT3 122 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms