RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 CRPP02741 224 aa6.67□□□□□ -1.34
COL8A1-206ENST00000474648 PRSS1P07477 247 aa6.67□□□□□ -1.34
COL8A1-206ENST00000474648 FAM19A3Q7Z5A8 133 aa6.67□□□□□ -1.34
COL8A1-206ENST00000474648 Q9HAA7 133 aa6.67□□□□□ -1.34
COL8A1-206ENST00000474648 TRAV12-1A0A0B4J245 112 aa6.66□□□□□ -1.34
COL8A1-206ENST00000474648 A0A0J9YXV3 536 aa6.66□□□□□ -1.34
COL8A1-206ENST00000474648 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
COL8A1-206ENST00000474648 CCL25O15444 150 aa6.66□□□□□ -1.34
COL8A1-206ENST00000474648 COX6A2Q02221 97 aa6.66□□□□□ -1.34
COL8A1-206ENST00000474648 SS18Q15532 418 aa6.66□□□□□ -1.34
COL8A1-206ENST00000474648 LINC00242Q5T6M2 205 aa6.66□□□□□ -1.34
COL8A1-206ENST00000474648 SPATA12Q7Z6I5 190 aa6.66□□□□□ -1.34
COL8A1-206ENST00000474648 C6orf223Q8N319 242 aa6.66□□□□□ -1.34
COL8A1-206ENST00000474648 MAPKAPK5-AS1Q8N8E1 139 aa6.66□□□□□ -1.34
COL8A1-206ENST00000474648 CHCHD10Q8WYQ3 142 aaPredicted RBP6.66□□□□□ -1.34
COL8A1-206ENST00000474648 IGKV2D-24A0A075B6R9 120 aa6.65□□□□□ -1.34
COL8A1-206ENST00000474648 GAGE12HA6NDE8 117 aa6.65□□□□□ -1.34
COL8A1-206ENST00000474648 SYS1-DBNDD2H3BUS1 97 aa6.65□□□□□ -1.34
COL8A1-206ENST00000474648 C3orf79P0CE67 100 aa6.65□□□□□ -1.34
COL8A1-206ENST00000474648 S100A2P29034 98 aa6.65□□□□□ -1.34
COL8A1-206ENST00000474648 FOXI1Q12951 378 aa6.65□□□□□ -1.34
COL8A1-206ENST00000474648 C1orf134Q5TEV5 83 aa6.65□□□□□ -1.34
COL8A1-206ENST00000474648 C2orf88Q9BSF0 95 aa6.65□□□□□ -1.34
COL8A1-206ENST00000474648 MAP1LC3CQ9BXW4 147 aa6.65□□□□□ -1.34
COL8A1-206ENST00000474648 FRAS1Q86XX4 4008 aa6.65□□□□□ -1.35
COL8A1-206ENST00000474648 DNAH11Q96DT5 4516 aa6.64□□□□□ -1.35
COL8A1-206ENST00000474648 IGLV4-69A0A075B6H9 119 aa6.64□□□□□ -1.35
COL8A1-206ENST00000474648 IGHV3OR16-9A0A0B4J2B5 98 aa6.64□□□□□ -1.35
COL8A1-206ENST00000474648 XCL1P47992 114 aa6.64□□□□□ -1.35
COL8A1-206ENST00000474648 ODF1Q14990 250 aa6.64□□□□□ -1.35
COL8A1-206ENST00000474648 CD164L2Q6UWJ8 174 aa6.64□□□□□ -1.35
COL8A1-206ENST00000474648 NFE4Q86UQ8 179 aa6.64□□□□□ -1.35
COL8A1-206ENST00000474648 RMI2Q96E14 147 aa6.64□□□□□ -1.35
COL8A1-206ENST00000474648 C1orf43Q9BWL3 253 aa6.64□□□□□ -1.35
COL8A1-206ENST00000474648 TM2D2Q9BX73 214 aa6.64□□□□□ -1.35
COL8A1-206ENST00000474648 MRPL35Q9NZE8 188 aaKnown RBP6.64□□□□□ -1.35
COL8A1-206ENST00000474648 CHTOPQ9Y3Y2 248 aaKnown RBP6.64□□□□□ -1.35
COL8A1-206ENST00000474648 FAT2Q9NYQ8 4349 aa6.64□□□□□ -1.35
COL8A1-206ENST00000474648 TINCRA0A1B0GVN0 87 aa6.63□□□□□ -1.35
COL8A1-206ENST00000474648 H0Y8G0 127 aa6.63□□□□□ -1.35
COL8A1-206ENST00000474648 RTL8CO15255 209 aa6.63□□□□□ -1.35
COL8A1-206ENST00000474648 IGLC3P0DOY3 106 aa6.63□□□□□ -1.35
COL8A1-206ENST00000474648 PET117Q6UWS5 81 aa6.63□□□□□ -1.35
COL8A1-206ENST00000474648 KRTAP4-12Q9BQ66 201 aa6.63□□□□□ -1.35
COL8A1-206ENST00000474648 COX11Q9Y6N1 276 aa6.63□□□□□ -1.35
COL8A1-206ENST00000474648 IGLV5-45A0A087WSX0 123 aa6.62□□□□□ -1.35
COL8A1-206ENST00000474648 F8VRH5 84 aa6.62□□□□□ -1.35
COL8A1-206ENST00000474648 KRTDAPP60985 99 aa6.62□□□□□ -1.35
COL8A1-206ENST00000474648 PMCHL2Q9BQD1 86 aa6.62□□□□□ -1.35
COL8A1-206ENST00000474648 LRCOL1A6NCL2 159 aa6.61□□□□□ -1.35
COL8A1-206ENST00000474648 C11orf86A6NJI1 115 aa6.61□□□□□ -1.35
COL8A1-206ENST00000474648 HERVK_113P63121 156 aa6.61□□□□□ -1.35
COL8A1-206ENST00000474648 SEC11AP67812 179 aa6.61□□□□□ -1.35
COL8A1-206ENST00000474648 LINC01545Q5VT33 79 aa6.61□□□□□ -1.35
COL8A1-206ENST00000474648 C5orf38Q86SI9 138 aa6.61□□□□□ -1.35
COL8A1-206ENST00000474648 OR10D4PQ8NGN7 298 aa6.61□□□□□ -1.35
COL8A1-206ENST00000474648 CDKN2A-AS1Q9UH64 79 aa6.61□□□□□ -1.35
COL8A1-206ENST00000474648 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.61□□□□□ -1.35
COL8A1-206ENST00000474648 A0A087WZ39 114 aa6.6□□□□□ -1.35
COL8A1-206ENST00000474648 ZNF22P17026 224 aaPredicted RBP6.6□□□□□ -1.35
COL8A1-206ENST00000474648 WFDC2Q14508 124 aa6.6□□□□□ -1.35
COL8A1-206ENST00000474648 CHAC1Q9BUX1 264 aa6.6□□□□□ -1.35
COL8A1-206ENST00000474648 GEMIN7Q9H840 131 aaKnown RBP6.6□□□□□ -1.35
COL8A1-206ENST00000474648 COX7A2LO14548 114 aa6.59□□□□□ -1.35
COL8A1-206ENST00000474648 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
COL8A1-206ENST00000474648 LINC01561Q8N1V8 128 aa6.59□□□□□ -1.35
COL8A1-206ENST00000474648 LINC00469Q8N7U9 141 aa6.59□□□□□ -1.35
COL8A1-206ENST00000474648 A0A087WTM6 91 aa6.58□□□□□ -1.36
COL8A1-206ENST00000474648 PSCAO43653 123 aa6.58□□□□□ -1.36
COL8A1-206ENST00000474648 DPM2O94777 84 aa6.58□□□□□ -1.36
COL8A1-206ENST00000474648 IGKCP01834 107 aa6.58□□□□□ -1.36
COL8A1-206ENST00000474648 C15orf56Q8N910 161 aa6.58□□□□□ -1.36
COL8A1-206ENST00000474648 HECTD4Q9Y4D8 3996 aa6.58□□□□□ -1.36
COL8A1-206ENST00000474648 PKD1P98161 4303 aa6.57□□□□□ -1.36
COL8A1-206ENST00000474648 IGHV3-64A0A075B6Q5 118 aa6.57□□□□□ -1.36
COL8A1-206ENST00000474648 TMEM223A0PJW6 202 aa6.57□□□□□ -1.36
COL8A1-206ENST00000474648 USP17L23D6RBM5 183 aa6.57□□□□□ -1.36
COL8A1-206ENST00000474648 LECT2O14960 151 aa6.57□□□□□ -1.36
COL8A1-206ENST00000474648 PLNP26678 52 aa6.57□□□□□ -1.36
COL8A1-206ENST00000474648 TMEM170BQ5T4T1 132 aa6.57□□□□□ -1.36
COL8A1-206ENST00000474648 IGHV1-58A0A0C4DH39 117 aa6.56□□□□□ -1.36
COL8A1-206ENST00000474648 IGLV5-39A0A0G2JS06 123 aa6.56□□□□□ -1.36
COL8A1-206ENST00000474648 SMIM1B2RUZ4 78 aa6.56□□□□□ -1.36
COL8A1-206ENST00000474648 SPINK8P0C7L1 97 aa6.56□□□□□ -1.36
COL8A1-206ENST00000474648 MALP21145 153 aa6.56□□□□□ -1.36
COL8A1-206ENST00000474648 KIAA0087Q14695 138 aa6.56□□□□□ -1.36
COL8A1-206ENST00000474648 CFAP161Q6P656 301 aa6.56□□□□□ -1.36
COL8A1-206ENST00000474648 DNAH5Q8TE73 4624 aa6.55□□□□□ -1.36
COL8A1-206ENST00000474648 GVQW2A0A096LPI5 108 aaPredicted RBP6.55□□□□□ -1.36
COL8A1-206ENST00000474648 C20orf202A1L168 122 aa6.55□□□□□ -1.36
COL8A1-206ENST00000474648 H3BRM9 83 aa6.55□□□□□ -1.36
COL8A1-206ENST00000474648 SLPIP03973 132 aa6.55□□□□□ -1.36
COL8A1-206ENST00000474648 JOSD1Q15040 202 aaPredicted RBP6.55□□□□□ -1.36
COL8A1-206ENST00000474648 LOC105371267A0A1B0GV96 52 aa6.54□□□□□ -1.36
COL8A1-206ENST00000474648 APOMO95445 188 aa6.54□□□□□ -1.36
COL8A1-206ENST00000474648 SCGB1D1O95968 90 aa6.54□□□□□ -1.36
COL8A1-206ENST00000474648 HIGD2BQ4VC39 106 aa6.54□□□□□ -1.36
COL8A1-206ENST00000474648 ATOH7Q8N100 152 aa6.54□□□□□ -1.36
COL8A1-206ENST00000474648 STPG4Q8N801 248 aa6.54□□□□□ -1.36
COL8A1-206ENST00000474648 Q8N814 137 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms