RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 C5orf47Q569G3 176 aa5.86□□□□□ -1.47
CCDC93-208ENST00000474546 Q6ZQT7 251 aa5.86□□□□□ -1.47
CCDC93-208ENST00000474546 IGHV3-64A0A075B6Q5 118 aa5.85□□□□□ -1.47
CCDC93-208ENST00000474546 A0A1W2PRX2 142 aa5.85□□□□□ -1.47
CCDC93-208ENST00000474546 J3QLI3 93 aa5.85□□□□□ -1.47
CCDC93-208ENST00000474546 INSP01308 110 aa5.85□□□□□ -1.47
CCDC93-208ENST00000474546 Q6JHZ5 121 aa5.85□□□□□ -1.47
CCDC93-208ENST00000474546 GAGE2AQ6NT46 116 aa5.85□□□□□ -1.47
CCDC93-208ENST00000474546 LINC01587Q99440 93 aa5.85□□□□□ -1.47
CCDC93-208ENST00000474546 CHCHD7Q9BUK0 85 aa5.85□□□□□ -1.47
CCDC93-208ENST00000474546 BPESC1Q9GZL8 116 aa5.85□□□□□ -1.47
CCDC93-208ENST00000474546 JPT2Q9H910 190 aa5.85□□□□□ -1.47
CCDC93-208ENST00000474546 UBR4Q5T4S7 5183 aa5.84□□□□□ -1.47
CCDC93-208ENST00000474546 RBMY1BA6NDE4 496 aaKnown RBP5.84□□□□□ -1.47
CCDC93-208ENST00000474546 RBMY1EA6NEQ0 496 aaKnown RBP5.84□□□□□ -1.47
CCDC93-208ENST00000474546 H3BUX3 64 aa5.84□□□□□ -1.47
CCDC93-208ENST00000474546 RS1O15537 224 aa5.84□□□□□ -1.47
CCDC93-208ENST00000474546 LY6HO94772 140 aa5.84□□□□□ -1.47
CCDC93-208ENST00000474546 TRBV12-3P01733 135 aa5.84□□□□□ -1.47
CCDC93-208ENST00000474546 IGHV3-11P01762 117 aa5.84□□□□□ -1.47
CCDC93-208ENST00000474546 RBMY1DP0C7P1 496 aaKnown RBP5.84□□□□□ -1.47
CCDC93-208ENST00000474546 RBMY1A1P0DJD3 496 aaKnown RBP5.84□□□□□ -1.47
CCDC93-208ENST00000474546 RBMY1CP0DJD4 496 aa5.84□□□□□ -1.47
CCDC93-208ENST00000474546 MALP21145 153 aa5.84□□□□□ -1.47
CCDC93-208ENST00000474546 HIST1H4AP62805 103 aaKnown RBP5.84□□□□□ -1.47
CCDC93-208ENST00000474546 RPL36AP83881 106 aaKnown RBP5.84□□□□□ -1.47
CCDC93-208ENST00000474546 KRTAP1-1Q07627 177 aa5.84□□□□□ -1.47
CCDC93-208ENST00000474546 ADAMTSL4-AS1Q5T5F5 129 aa5.84□□□□□ -1.47
CCDC93-208ENST00000474546 C3orf56Q8N813 242 aa5.84□□□□□ -1.47
CCDC93-208ENST00000474546 CLEC2BQ92478 149 aa5.84□□□□□ -1.47
CCDC93-208ENST00000474546 RPL36ALQ969Q0 106 aaKnown RBP5.84□□□□□ -1.47
CCDC93-208ENST00000474546 UBE2E2Q96LR5 201 aa5.84□□□□□ -1.47
CCDC93-208ENST00000474546 DUX3Q96PT4 197 aa5.84□□□□□ -1.47
CCDC93-208ENST00000474546 UBTD1Q9HAC8 227 aa5.84□□□□□ -1.47
CCDC93-208ENST00000474546 MUC4Q99102 2169 aa5.84□□□□□ -1.47
CCDC93-208ENST00000474546 JMJD7-PLA2G4BH0Y9G9 81 aa5.83□□□□□ -1.48
CCDC93-208ENST00000474546 GHRHP01286 108 aa5.83□□□□□ -1.48
CCDC93-208ENST00000474546 RPL18AQ02543 176 aaKnown RBP5.83□□□□□ -1.48
CCDC93-208ENST00000474546 SPINK13Q1W4C9 94 aa5.83□□□□□ -1.48
CCDC93-208ENST00000474546 C11orf44Q8N8P7 122 aa5.83□□□□□ -1.48
CCDC93-208ENST00000474546 CHCHD5Q9BSY4 110 aa5.83□□□□□ -1.48
CCDC93-208ENST00000474546 Q9H8V8 135 aa5.83□□□□□ -1.48
CCDC93-208ENST00000474546 VPREB3Q9UKI3 123 aa5.83□□□□□ -1.48
CCDC93-208ENST00000474546 TRAV25A0A0B4J276 109 aa5.82□□□□□ -1.48
CCDC93-208ENST00000474546 TRBV10-3A0A0K0K1G6 114 aa5.82□□□□□ -1.48
CCDC93-208ENST00000474546 B4DSR2 109 aa5.82□□□□□ -1.48
CCDC93-208ENST00000474546 SERP2Q8N6R1 65 aa5.82□□□□□ -1.48
CCDC93-208ENST00000474546 MUC7Q8TAX7 377 aa5.82□□□□□ -1.48
CCDC93-208ENST00000474546 OPRPNQ99935 248 aaPredicted RBP5.82□□□□□ -1.48
CCDC93-208ENST00000474546 CDKN2A-AS1Q9UH64 79 aa5.82□□□□□ -1.48
CCDC93-208ENST00000474546 LINC00527Q9UJ94 153 aa5.82□□□□□ -1.48
CCDC93-208ENST00000474546 IGKV3-7A0A075B6H7 116 aa5.81□□□□□ -1.48
CCDC93-208ENST00000474546 hADV29S1A0JD25 119 aa5.81□□□□□ -1.48
CCDC93-208ENST00000474546 IBA57-AS1B1ANH7 110 aa5.81□□□□□ -1.48
CCDC93-208ENST00000474546 NDUFC2O95298 119 aa5.81□□□□□ -1.48
CCDC93-208ENST00000474546 MSMBP08118 114 aa5.81□□□□□ -1.48
CCDC93-208ENST00000474546 ZNF625Q96I27 306 aaPredicted RBP5.81□□□□□ -1.48
CCDC93-208ENST00000474546 DUX5Q96PT3 197 aa5.81□□□□□ -1.48
CCDC93-208ENST00000474546 CMYA5Q8N3K9 4069 aa5.81□□□□□ -1.48
CCDC93-208ENST00000474546 WNK2Q9Y3S1 2297 aa5.81□□□□□ -1.48
CCDC93-208ENST00000474546 ARHGAP32A7KAX9 2087 aa5.8□□□□□ -1.48
CCDC93-208ENST00000474546 TRAV12-2A0A075B6T6 113 aa5.8□□□□□ -1.48
CCDC93-208ENST00000474546 SMIM1B2RUZ4 78 aa5.8□□□□□ -1.48
CCDC93-208ENST00000474546 UBE2L6O14933 153 aa5.8□□□□□ -1.48
CCDC93-208ENST00000474546 LINC00242Q5T6M2 205 aa5.8□□□□□ -1.48
CCDC93-208ENST00000474546 LINC01561Q8N1V8 128 aa5.8□□□□□ -1.48
CCDC93-208ENST00000474546 C10orf105Q8TEF2 133 aa5.8□□□□□ -1.48
CCDC93-208ENST00000474546 OBSCN-AS1Q96MR7 158 aa5.8□□□□□ -1.48
CCDC93-208ENST00000474546 ADARB2-AS1A8MUL3 147 aa5.79□□□□□ -1.48
CCDC93-208ENST00000474546 SPRY2O43597 315 aa5.79□□□□□ -1.48
CCDC93-208ENST00000474546 FAM104AQ969W3 186 aa5.79□□□□□ -1.48
CCDC93-208ENST00000474546 K7EQD1 137 aa5.78□□□□□ -1.48
CCDC93-208ENST00000474546 PDE6GP18545 87 aa5.78□□□□□ -1.48
CCDC93-208ENST00000474546 LY6EQ16553 131 aa5.78□□□□□ -1.48
CCDC93-208ENST00000474546 TMEM86BQ8N661 226 aa5.78□□□□□ -1.48
CCDC93-208ENST00000474546 TMEM243Q9BU79 118 aa5.78□□□□□ -1.48
CCDC93-208ENST00000474546 ORMDL1Q9P0S3 153 aa5.78□□□□□ -1.48
CCDC93-208ENST00000474546 KLK5Q9Y337 293 aaPredicted RBP5.78□□□□□ -1.48
CCDC93-208ENST00000474546 ROS1P08922 2347 aa5.77□□□□□ -1.49
CCDC93-208ENST00000474546 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.77□□□□□ -1.49
CCDC93-208ENST00000474546 IGHV3OR16-12A0A075B7B8 117 aa5.77□□□□□ -1.49
CCDC93-208ENST00000474546 IGHV3OR16-10A0A075B7F0 116 aa5.77□□□□□ -1.49
CCDC93-208ENST00000474546 IGKV2-29A2NJV5 120 aaPredicted RBP5.77□□□□□ -1.49
CCDC93-208ENST00000474546 TMEM256-PLSCR3K7ERE1 68 aa5.77□□□□□ -1.49
CCDC93-208ENST00000474546 HOXD3P31249 432 aaPredicted RBP5.77□□□□□ -1.49
CCDC93-208ENST00000474546 DEFB1P60022 68 aa5.77□□□□□ -1.49
CCDC93-208ENST00000474546 BRD3OSQ6XYD6 125 aa5.77□□□□□ -1.49
CCDC93-208ENST00000474546 COX7B2Q8TF08 81 aa5.77□□□□□ -1.49
CCDC93-208ENST00000474546 CCL19Q99731 98 aa5.77□□□□□ -1.49
CCDC93-208ENST00000474546 SND1-IT1Q9HBX3 110 aa5.77□□□□□ -1.49
CCDC93-208ENST00000474546 CDC42SE2Q9NRR3 84 aa5.77□□□□□ -1.49
CCDC93-208ENST00000474546 IGKV3-20P01619 116 aa5.76□□□□□ -1.49
CCDC93-208ENST00000474546 LINC00694P0DN24 101 aa5.76□□□□□ -1.49
CCDC93-208ENST00000474546 SYNJ2BPP57105 145 aa5.76□□□□□ -1.49
CCDC93-208ENST00000474546 BLCAPP62952 87 aa5.76□□□□□ -1.49
CCDC93-208ENST00000474546 C11orf72Q8NBR9 251 aa5.76□□□□□ -1.49
CCDC93-208ENST00000474546 DYNLRB2Q8TF09 96 aa5.76□□□□□ -1.49
CCDC93-208ENST00000474546 COL7A1Q02388 2944 aa5.76□□□□□ -1.49
CCDC93-208ENST00000474546 SACSQ9NZJ4 4579 aa5.75□□□□□ -1.49
CCDC93-208ENST00000474546 TRBV6-4A0A1B0GX49 114 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms