RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 DSPP15924 2871 aaKnown RBP-0.61□□□□□ -2.51
ECHDC1-213ENST00000474240 KDM5AP29375 1690 aaKnown RBP-0.62□□□□□ -2.51
ECHDC1-213ENST00000474240 STARD9Q9P2P6 4700 aa-0.62□□□□□ -2.51
ECHDC1-213ENST00000474240 M0R2T5 61 aa-0.62□□□□□ -2.51
ECHDC1-213ENST00000474240 FDCSPQ8NFU4 85 aa-0.62□□□□□ -2.51
ECHDC1-213ENST00000474240 TMEM263Q8WUH6 116 aaKnown RBP-0.62□□□□□ -2.51
ECHDC1-213ENST00000474240 EP300Q09472 2414 aaPredicted RBP-0.62□□□□□ -2.51
ECHDC1-213ENST00000474240 KTN1Q86UP2 1357 aaKnown RBP-0.62□□□□□ -2.51
ECHDC1-213ENST00000474240 HECTD4Q9Y4D8 3996 aa-0.62□□□□□ -2.51
ECHDC1-213ENST00000474240 WNK1Q9H4A3 2382 aa-0.62□□□□□ -2.51
ECHDC1-213ENST00000474240 SETBP1Q9Y6X0 1596 aa-0.62□□□□□ -2.51
ECHDC1-213ENST00000474240 PDZD2O15018 2839 aa-0.63□□□□□ -2.51
ECHDC1-213ENST00000474240 TCHHQ07283 1943 aa-0.63□□□□□ -2.51
ECHDC1-213ENST00000474240 CATR1Q13166 79 aa-0.63□□□□□ -2.51
ECHDC1-213ENST00000474240 LSM10Q969L4 123 aaKnown RBP-0.63□□□□□ -2.51
ECHDC1-213ENST00000474240 TSC22D3Q99576 134 aa-0.63□□□□□ -2.51
ECHDC1-213ENST00000474240 SPANXDQ9BXN6 97 aa-0.63□□□□□ -2.51
ECHDC1-213ENST00000474240 LINC00470Q9BZP3 86 aa-0.63□□□□□ -2.51
ECHDC1-213ENST00000474240 NXT2Q9NPJ8 142 aaKnown RBP-0.63□□□□□ -2.51
ECHDC1-213ENST00000474240 SPTA1P02549 2419 aa-0.63□□□□□ -2.51
ECHDC1-213ENST00000474240 ACANP16112 2415 aa-0.64□□□□□ -2.51
ECHDC1-213ENST00000474240 IQSEC2Q5JU85 1478 aa-0.64□□□□□ -2.51
ECHDC1-213ENST00000474240 COMMD6Q7Z4G1 85 aa-0.64□□□□□ -2.51
ECHDC1-213ENST00000474240 DEFB105AQ8NG35 78 aa-0.64□□□□□ -2.51
ECHDC1-213ENST00000474240 TSLPQ969D9 159 aa-0.64□□□□□ -2.51
ECHDC1-213ENST00000474240 PRO1933Q9H354 126 aa-0.64□□□□□ -2.51
ECHDC1-213ENST00000474240 COL6A3P12111 3177 aa-0.65□□□□□ -2.51
ECHDC1-213ENST00000474240 SONP18583 2426 aaKnown RBP-0.65□□□□□ -2.51
ECHDC1-213ENST00000474240 MYOM1P52179 1685 aa-0.65□□□□□ -2.51
ECHDC1-213ENST00000474240 CHKB-CPT1BH3BT56 60 aa-0.65□□□□□ -2.51
ECHDC1-213ENST00000474240 FGF7P21781 194 aa-0.65□□□□□ -2.51
ECHDC1-213ENST00000474240 BTG2P78543 158 aa-0.65□□□□□ -2.51
ECHDC1-213ENST00000474240 C5orf38Q86SI9 138 aa-0.65□□□□□ -2.51
ECHDC1-213ENST00000474240 FLNBO75369 2602 aaKnown RBP-0.66□□□□□ -2.51
ECHDC1-213ENST00000474240 CCDC141Q6ZP82 1450 aa-0.66□□□□□ -2.51
ECHDC1-213ENST00000474240 PIEZO2Q9H5I5 2752 aa-0.66□□□□□ -2.51
ECHDC1-213ENST00000474240 GNG7O60262 68 aa-0.66□□□□□ -2.52
ECHDC1-213ENST00000474240 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.66□□□□□ -2.52
ECHDC1-213ENST00000474240 MAGI1Q96QZ7 1491 aaPredicted RBP-0.67□□□□□ -2.52
ECHDC1-213ENST00000474240 LAMA5O15230 3695 aa-0.67□□□□□ -2.52
ECHDC1-213ENST00000474240 F6UZH7 168 aa-0.67□□□□□ -2.52
ECHDC1-213ENST00000474240 ATP5EP56381 51 aaPredicted RBP-0.67□□□□□ -2.52
ECHDC1-213ENST00000474240 C10orf113Q5VZT2 155 aa-0.67□□□□□ -2.52
ECHDC1-213ENST00000474240 SMG6Q86US8 1419 aaKnown RBP-0.67□□□□□ -2.52
ECHDC1-213ENST00000474240 NSD3Q9BZ95 1437 aa-0.67□□□□□ -2.52
ECHDC1-213ENST00000474240 GVINP1Q7Z2Y8 2422 aa-0.68□□□□□ -2.52
ECHDC1-213ENST00000474240 STAB2Q8WWQ8 2551 aa-0.68□□□□□ -2.52
ECHDC1-213ENST00000474240 LOC105371267A0A1B0GV96 52 aa-0.68□□□□□ -2.52
ECHDC1-213ENST00000474240 TGP01266 2768 aa-0.68□□□□□ -2.52
ECHDC1-213ENST00000474240 BICRAQ9NZM4 1560 aa-0.68□□□□□ -2.52
ECHDC1-213ENST00000474240 ARL2-SNX15V9GYD0 113 aa-0.68□□□□□ -2.52
ECHDC1-213ENST00000474240 MYH7P12883 1935 aa-0.68□□□□□ -2.52
ECHDC1-213ENST00000474240 PSME4Q14997 1843 aa-0.68□□□□□ -2.52
ECHDC1-213ENST00000474240 GOLGA4Q13439 2230 aaKnown RBP-0.69□□□□□ -2.52
ECHDC1-213ENST00000474240 UBE2L5PA0A1B0GUS4 154 aa-0.69□□□□□ -2.52
ECHDC1-213ENST00000474240 IGLC1P0CG04 106 aa-0.69□□□□□ -2.52
ECHDC1-213ENST00000474240 UBE2L3P68036 154 aaKnown RBP-0.69□□□□□ -2.52
ECHDC1-213ENST00000474240 C1orf54Q8WWF1 131 aa-0.69□□□□□ -2.52
ECHDC1-213ENST00000474240 FAM167A-AS1Q96KT0 104 aa-0.69□□□□□ -2.52
ECHDC1-213ENST00000474240 KIAA0556O60303 1618 aa-0.69□□□□□ -2.52
ECHDC1-213ENST00000474240 BIRC6Q9NR09 4857 aa-0.69□□□□□ -2.52
ECHDC1-213ENST00000474240 TULP4Q9NRJ4 1543 aa-0.69□□□□□ -2.52
ECHDC1-213ENST00000474240 COX6CP09669 75 aa-0.7□□□□□ -2.52
ECHDC1-213ENST00000474240 AKAIN1P0CW23 69 aa-0.7□□□□□ -2.52
ECHDC1-213ENST00000474240 FAM223AQ8IWN6 122 aa-0.7□□□□□ -2.52
ECHDC1-213ENST00000474240 BSNQ9UPA5 3926 aa-0.7□□□□□ -2.52
ECHDC1-213ENST00000474240 BTAF1O14981 1849 aa-0.71□□□□□ -2.52
ECHDC1-213ENST00000474240 EPG5Q9HCE0 2579 aa-0.71□□□□□ -2.52
ECHDC1-213ENST00000474240 PHLPP1O60346 1717 aa-0.71□□□□□ -2.52
ECHDC1-213ENST00000474240 A0A1B0GWA3 101 aa-0.71□□□□□ -2.52
ECHDC1-213ENST00000474240 FAM24AA6NFZ4 105 aa-0.71□□□□□ -2.52
ECHDC1-213ENST00000474240 TRAPPC2P0DI81 140 aa-0.71□□□□□ -2.52
ECHDC1-213ENST00000474240 TRAPPC2BP0DI82 140 aa-0.71□□□□□ -2.52
ECHDC1-213ENST00000474240 GNG11P61952 73 aa-0.71□□□□□ -2.52
ECHDC1-213ENST00000474240 C9orf153Q5TBE3 101 aa-0.71□□□□□ -2.52
ECHDC1-213ENST00000474240 LINC01600Q96MT4 127 aa-0.71□□□□□ -2.52
ECHDC1-213ENST00000474240 FAM107BQ9H098 131 aa-0.72□□□□□ -2.52
ECHDC1-213ENST00000474240 CHD8Q9HCK8 2581 aa-0.72□□□□□ -2.53
ECHDC1-213ENST00000474240 URB1O60287 2271 aaKnown RBP-0.72□□□□□ -2.53
ECHDC1-213ENST00000474240 A0A0G2JMZ2 1700 aa-0.72□□□□□ -2.53
ECHDC1-213ENST00000474240 NBEAL1Q6ZS30 2694 aa-0.72□□□□□ -2.53
ECHDC1-213ENST00000474240 FAT2Q9NYQ8 4349 aa-0.73□□□□□ -2.53
ECHDC1-213ENST00000474240 MBD5Q9P267 1494 aa-0.73□□□□□ -2.53
ECHDC1-213ENST00000474240 LAMA2P24043 3122 aaKnown RBP-0.73□□□□□ -2.53
ECHDC1-213ENST00000474240 EHBP1L1Q8N3D4 1523 aa-0.73□□□□□ -2.53
ECHDC1-213ENST00000474240 COL6A5A8TX70 2615 aa-0.73□□□□□ -2.53
ECHDC1-213ENST00000474240 LINC00959A0A1B0GUT2 108 aa-0.73□□□□□ -2.53
ECHDC1-213ENST00000474240 S100A12P80511 92 aa-0.73□□□□□ -2.53
ECHDC1-213ENST00000474240 KLK9Q2XQG4 91 aa-0.73□□□□□ -2.53
ECHDC1-213ENST00000474240 SPRR4Q96PI1 79 aa-0.73□□□□□ -2.53
ECHDC1-213ENST00000474240 C12orf57Q99622 126 aa-0.73□□□□□ -2.53
ECHDC1-213ENST00000474240 MANBALQ9NQG1 85 aa-0.73□□□□□ -2.53
ECHDC1-213ENST00000474240 CDC42SE2Q9NRR3 84 aa-0.73□□□□□ -2.53
ECHDC1-213ENST00000474240 CNOT1A5YKK6 2376 aaKnown RBP-0.74□□□□□ -2.53
ECHDC1-213ENST00000474240 FAT3Q8TDW7 4589 aa-0.74□□□□□ -2.53
ECHDC1-213ENST00000474240 HECTD1Q9ULT8 2610 aa-0.74□□□□□ -2.53
ECHDC1-213ENST00000474240 NBEAL2Q6ZNJ1 2754 aa-0.74□□□□□ -2.53
ECHDC1-213ENST00000474240 SEC11AP67812 179 aa-0.74□□□□□ -2.53
ECHDC1-213ENST00000474240 ATRQ13535 2644 aa-0.74□□□□□ -2.53
ECHDC1-213ENST00000474240 DNAJC13O75165 2243 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms