RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 SPATA12Q7Z6I5 190 aa6.79□□□□□ -1.32
CASC3-204ENST00000474190 C1orf43Q9BWL3 253 aa6.79□□□□□ -1.32
CASC3-204ENST00000474190 LINC01549A6NIU2 74 aa6.78□□□□□ -1.32
CASC3-204ENST00000474190 LECT2O14960 151 aa6.78□□□□□ -1.32
CASC3-204ENST00000474190 HSBP1O75506 76 aa6.78□□□□□ -1.32
CASC3-204ENST00000474190 SLPIP03973 132 aa6.78□□□□□ -1.32
CASC3-204ENST00000474190 G0S2P27469 103 aa6.78□□□□□ -1.32
CASC3-204ENST00000474190 FUSP35637 526 aaKnown RBP eCLIP6.78□□□□□ -1.32
CASC3-204ENST00000474190 NDUFA6P56556 154 aa6.78□□□□□ -1.32
CASC3-204ENST00000474190 SMAGPQ0VAQ4 97 aa6.78□□□□□ -1.32
CASC3-204ENST00000474190 TM2D2Q9BX73 214 aa6.78□□□□□ -1.32
CASC3-204ENST00000474190 VCX2Q9H322 139 aa6.78□□□□□ -1.32
CASC3-204ENST00000474190 HERC1Q15751 4861 aa6.78□□□□□ -1.32
CASC3-204ENST00000474190 HSPG2P98160 4391 aa6.77□□□□□ -1.33
CASC3-204ENST00000474190 IGLV5-45A0A087WSX0 123 aa6.77□□□□□ -1.33
CASC3-204ENST00000474190 A0A0J9YXV3 536 aa6.77□□□□□ -1.33
CASC3-204ENST00000474190 USP17L23D6RBM5 183 aa6.77□□□□□ -1.33
CASC3-204ENST00000474190 PRSS1P07477 247 aa6.77□□□□□ -1.33
CASC3-204ENST00000474190 TEX43Q6ZNM6 134 aa6.77□□□□□ -1.33
CASC3-204ENST00000474190 COX11Q9Y6N1 276 aa6.77□□□□□ -1.33
CASC3-204ENST00000474190 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.76□□□□□ -1.33
CASC3-204ENST00000474190 PMVKQ15126 192 aa6.76□□□□□ -1.33
CASC3-204ENST00000474190 HIST3H2BBQ8N257 126 aa6.76□□□□□ -1.33
CASC3-204ENST00000474190 Q8N814 137 aa6.76□□□□□ -1.33
CASC3-204ENST00000474190 IFI27L1Q96BM0 104 aa6.76□□□□□ -1.33
CASC3-204ENST00000474190 RMI2Q96E14 147 aa6.76□□□□□ -1.33
CASC3-204ENST00000474190 A0A087WZ39 114 aa6.75□□□□□ -1.33
CASC3-204ENST00000474190 TRAV12-1A0A0B4J245 112 aa6.75□□□□□ -1.33
CASC3-204ENST00000474190 ATP5LO75964 103 aa6.75□□□□□ -1.33
CASC3-204ENST00000474190 IGLC3P0DOY3 106 aa6.75□□□□□ -1.33
CASC3-204ENST00000474190 ODF1Q14990 250 aa6.75□□□□□ -1.33
CASC3-204ENST00000474190 SS18Q15532 418 aa6.75□□□□□ -1.33
CASC3-204ENST00000474190 C5orf38Q86SI9 138 aa6.75□□□□□ -1.33
CASC3-204ENST00000474190 KRTAP4-5Q9BYR2 181 aa6.75□□□□□ -1.33
CASC3-204ENST00000474190 TINCRA0A1B0GVN0 87 aa6.74□□□□□ -1.33
CASC3-204ENST00000474190 C5orf52A6NGY3 159 aa6.74□□□□□ -1.33
CASC3-204ENST00000474190 C11orf86A6NJI1 115 aa6.74□□□□□ -1.33
CASC3-204ENST00000474190 LEPROTL1O95214 131 aa6.74□□□□□ -1.33
CASC3-204ENST00000474190 FABP4P15090 132 aa6.74□□□□□ -1.33
CASC3-204ENST00000474190 KIAA0087Q14695 138 aa6.74□□□□□ -1.33
CASC3-204ENST00000474190 Q6ZN92 141 aa6.74□□□□□ -1.33
CASC3-204ENST00000474190 PACRGQ96M98 296 aaPredicted RBP6.74□□□□□ -1.33
CASC3-204ENST00000474190 CDKN2A-AS1Q9UH64 79 aa6.74□□□□□ -1.33
CASC3-204ENST00000474190 FAT1Q14517 4588 aa6.74□□□□□ -1.33
CASC3-204ENST00000474190 GVQW2A0A096LPI5 108 aaPredicted RBP6.73□□□□□ -1.33
CASC3-204ENST00000474190 PSCAO43653 123 aa6.73□□□□□ -1.33
CASC3-204ENST00000474190 PAPPA-AS1Q5QFB9 102 aa6.73□□□□□ -1.33
CASC3-204ENST00000474190 HIST1H2BLQ99880 126 aa6.73□□□□□ -1.33
CASC3-204ENST00000474190 MRPL35Q9NZE8 188 aaKnown RBP6.73□□□□□ -1.33
CASC3-204ENST00000474190 COX7A2LO14548 114 aa6.72□□□□□ -1.33
CASC3-204ENST00000474190 ZNF22P17026 224 aaPredicted RBP6.72□□□□□ -1.33
CASC3-204ENST00000474190 SNRPEP62304 92 aaKnown RBP6.72□□□□□ -1.33
CASC3-204ENST00000474190 LINC00526Q96FQ7 95 aa6.72□□□□□ -1.33
CASC3-204ENST00000474190 C2orf88Q9BSF0 95 aa6.72□□□□□ -1.33
CASC3-204ENST00000474190 IGHV3-64A0A075B6Q5 118 aa6.71□□□□□ -1.34
CASC3-204ENST00000474190 SMIM1B2RUZ4 78 aa6.71□□□□□ -1.34
CASC3-204ENST00000474190 C3orf79P0CE67 100 aa6.71□□□□□ -1.34
CASC3-204ENST00000474190 HIGD2BQ4VC39 106 aa6.71□□□□□ -1.34
CASC3-204ENST00000474190 LINC01561Q8N1V8 128 aa6.71□□□□□ -1.34
CASC3-204ENST00000474190 HSPB8Q9UJY1 196 aa6.71□□□□□ -1.34
CASC3-204ENST00000474190 IGHV1-58A0A0C4DH39 117 aa6.7□□□□□ -1.34
CASC3-204ENST00000474190 IGLV5-39A0A0G2JS06 123 aa6.7□□□□□ -1.34
CASC3-204ENST00000474190 SYS1-DBNDD2H3BUS1 97 aa6.7□□□□□ -1.34
CASC3-204ENST00000474190 CNBPP62633 177 aaKnown RBP6.7□□□□□ -1.34
CASC3-204ENST00000474190 HERVK_113P63121 156 aa6.7□□□□□ -1.34
CASC3-204ENST00000474190 C4orf48Q5BLP8 95 aa6.7□□□□□ -1.34
CASC3-204ENST00000474190 PMCHL2Q9BQD1 86 aa6.7□□□□□ -1.34
CASC3-204ENST00000474190 CHAC1Q9BUX1 264 aa6.7□□□□□ -1.34
CASC3-204ENST00000474190 CHTOPQ9Y3Y2 248 aaKnown RBP6.7□□□□□ -1.34
CASC3-204ENST00000474190 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.69□□□□□ -1.34
CASC3-204ENST00000474190 F8VRH5 84 aa6.69□□□□□ -1.34
CASC3-204ENST00000474190 KRTAP10-1P60331 282 aa6.69□□□□□ -1.34
CASC3-204ENST00000474190 LINC01620Q4KN68 170 aa6.69□□□□□ -1.34
CASC3-204ENST00000474190 C10orf25Q5T742 122 aa6.69□□□□□ -1.34
CASC3-204ENST00000474190 LINC01545Q5VT33 79 aa6.69□□□□□ -1.34
CASC3-204ENST00000474190 SPINK8P0C7L1 97 aa6.68□□□□□ -1.34
CASC3-204ENST00000474190 SEC11AP67812 179 aa6.68□□□□□ -1.34
CASC3-204ENST00000474190 LINC00469Q8N7U9 141 aa6.68□□□□□ -1.34
CASC3-204ENST00000474190 UBR4Q5T4S7 5183 aa6.68□□□□□ -1.34
CASC3-204ENST00000474190 hDV102S1A0JD36 115 aa6.67□□□□□ -1.34
CASC3-204ENST00000474190 TMEM223A0PJW6 202 aa6.67□□□□□ -1.34
CASC3-204ENST00000474190 H0Y8G0 127 aa6.67□□□□□ -1.34
CASC3-204ENST00000474190 OR10D4PQ8NGN7 298 aa6.67□□□□□ -1.34
CASC3-204ENST00000474190 ORAOV1Q8WV07 137 aa6.67□□□□□ -1.34
CASC3-204ENST00000474190 GEMIN7Q9H840 131 aaKnown RBP6.67□□□□□ -1.34
CASC3-204ENST00000474190 PGPEP1Q9NXJ5 209 aa6.67□□□□□ -1.34
CASC3-204ENST00000474190 PANO1I0J062 215 aa6.66□□□□□ -1.34
CASC3-204ENST00000474190 MALP21145 153 aa6.66□□□□□ -1.34
CASC3-204ENST00000474190 SPAG11BQ08648 103 aa6.66□□□□□ -1.34
CASC3-204ENST00000474190 C14orf177Q52M58 125 aa6.66□□□□□ -1.34
CASC3-204ENST00000474190 CDPF1Q6NVV7 123 aa6.66□□□□□ -1.34
CASC3-204ENST00000474190 CFAP161Q6P656 301 aa6.66□□□□□ -1.34
CASC3-204ENST00000474190 PET117Q6UWS5 81 aa6.66□□□□□ -1.34
CASC3-204ENST00000474190 SDIM1Q6ZPB5 146 aa6.66□□□□□ -1.34
CASC3-204ENST00000474190 Q6ZRU5 148 aa6.66□□□□□ -1.34
CASC3-204ENST00000474190 C9orf163Q8N9P6 203 aa6.66□□□□□ -1.34
CASC3-204ENST00000474190 C2orf48Q96LS8 159 aa6.66□□□□□ -1.34
CASC3-204ENST00000474190 MAP1LC3CQ9BXW4 147 aa6.66□□□□□ -1.34
CASC3-204ENST00000474190 FAM30AQ9NZY2 134 aa6.66□□□□□ -1.34
CASC3-204ENST00000474190 IGLV5-52A0A0A0MRZ9 124 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms