RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 TMEM101Q96IK0 257 aa13.24□□□□□ -0.29
APP-215ENST00000474136 TIMM17AQ99595 171 aa13.24□□□□□ -0.29
APP-215ENST00000474136 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.23□□□□□ -0.29
APP-215ENST00000474136 A0A1B0GUV1 79 aa13.23□□□□□ -0.29
APP-215ENST00000474136 IGKV2-29A2NJV5 120 aaPredicted RBP13.23□□□□□ -0.29
APP-215ENST00000474136 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.23□□□□□ -0.29
APP-215ENST00000474136 TMEM262E9PQX1 116 aa13.22□□□□□ -0.29
APP-215ENST00000474136 FGF6P10767 208 aa13.22□□□□□ -0.29
APP-215ENST00000474136 RPL39P62891 51 aaKnown RBP13.22□□□□□ -0.29
APP-215ENST00000474136 CHAC1Q9BUX1 264 aa13.22□□□□□ -0.29
APP-215ENST00000474136 UBE2D4Q9Y2X8 147 aa13.22□□□□□ -0.29
APP-215ENST00000474136 A0A087WX48 190 aa13.21□□□□□ -0.29
APP-215ENST00000474136 CIRBP-AS1Q8TBR5 109 aa13.21□□□□□ -0.29
APP-215ENST00000474136 BAALCQ8WXS3 180 aa13.21□□□□□ -0.29
APP-215ENST00000474136 IGIPA6NJ69 53 aa13.2□□□□□ -0.3
APP-215ENST00000474136 MRPS36P82909 103 aaKnown RBP13.2□□□□□ -0.3
APP-215ENST00000474136 GAGE6Q13070 117 aa13.2□□□□□ -0.3
APP-215ENST00000474136 Q6ZN92 141 aa13.2□□□□□ -0.3
APP-215ENST00000474136 OR5A1Q8NGJ0 315 aa13.2□□□□□ -0.3
APP-215ENST00000474136 HIST1H2BLQ99880 126 aa13.2□□□□□ -0.3
APP-215ENST00000474136 FABP4P15090 132 aa13.19□□□□□ -0.3
APP-215ENST00000474136 IFI27L1Q96BM0 104 aa13.19□□□□□ -0.3
APP-215ENST00000474136 MAP1LC3CQ9BXW4 147 aa13.18□□□□□ -0.3
APP-215ENST00000474136 HNRNPA3P51991 378 aaKnown RBP13.17□□□□□ -0.3
APP-215ENST00000474136 RBX1P62877 108 aa13.16□□□□□ -0.3
APP-215ENST00000474136 ZNF664Q8N3J9 261 aa13.16□□□□□ -0.3
APP-215ENST00000474136 VCX2Q9H322 139 aa13.16□□□□□ -0.3
APP-215ENST00000474136 TRAV8-3A0A0A6YYJ7 113 aa13.15□□□□□ -0.3
APP-215ENST00000474136 PRSS1P07477 247 aa13.15□□□□□ -0.3
APP-215ENST00000474136 CDC42SE2Q9NRR3 84 aa13.15□□□□□ -0.3
APP-215ENST00000474136 IGLV4-3A0A075B6K6 122 aa13.14□□□□□ -0.31
APP-215ENST00000474136 MPV17L2Q567V2 206 aa13.14□□□□□ -0.31
APP-215ENST00000474136 TEX43Q6ZNM6 134 aa13.13□□□□□ -0.31
APP-215ENST00000474136 C2orf88Q9BSF0 95 aa13.13□□□□□ -0.31
APP-215ENST00000474136 LRP2P98164 4655 aa13.13□□□□□ -0.31
APP-215ENST00000474136 IFITM10A6NMD0 228 aa13.13□□□□□ -0.31
APP-215ENST00000474136 PMVKQ15126 192 aa13.13□□□□□ -0.31
APP-215ENST00000474136 TRAV12-1A0A0B4J245 112 aa13.12□□□□□ -0.31
APP-215ENST00000474136 CCL25O15444 150 aa13.12□□□□□ -0.31
APP-215ENST00000474136 ANGP03950 147 aaKnown RBP13.12□□□□□ -0.31
APP-215ENST00000474136 AKR1D1P51857 326 aa13.12□□□□□ -0.31
APP-215ENST00000474136 RPL37AP61513 92 aaKnown RBP13.12□□□□□ -0.31
APP-215ENST00000474136 Q8N976 141 aa13.12□□□□□ -0.31
APP-215ENST00000474136 AMELXQ99217 191 aa13.12□□□□□ -0.31
APP-215ENST00000474136 RNF213Q63HN8 5207 aa13.11□□□□□ -0.31
APP-215ENST00000474136 IGLV4-60A0A075B6I1 120 aa13.11□□□□□ -0.31
APP-215ENST00000474136 SYS1-DBNDD2H3BUS1 97 aa13.11□□□□□ -0.31
APP-215ENST00000474136 MT1HL1P0DM35 61 aa13.11□□□□□ -0.31
APP-215ENST00000474136 KRTDAPP60985 99 aa13.11□□□□□ -0.31
APP-215ENST00000474136 PET117Q6UWS5 81 aa13.11□□□□□ -0.31
APP-215ENST00000474136 LINC00173Q6ZV60 143 aa13.11□□□□□ -0.31
APP-215ENST00000474136 Q6ZUT4 128 aa13.1□□□□□ -0.31
APP-215ENST00000474136 OR10D4PQ8NGN7 298 aa13.1□□□□□ -0.31
APP-215ENST00000474136 OPRPNQ99935 248 aaPredicted RBP13.1□□□□□ -0.31
APP-215ENST00000474136 CST9LQ9H4G1 147 aa13.1□□□□□ -0.31
APP-215ENST00000474136 C20orf202A1L168 122 aa13.09□□□□□ -0.31
APP-215ENST00000474136 C3orf79P0CE67 100 aa13.09□□□□□ -0.31
APP-215ENST00000474136 SEC11AP67812 179 aa13.09□□□□□ -0.31
APP-215ENST00000474136 IGKV2D-24A0A075B6R9 120 aa13.08□□□□□ -0.32
APP-215ENST00000474136 FAM104AQ969W3 186 aa13.08□□□□□ -0.32
APP-215ENST00000474136 COX11Q9Y6N1 276 aa13.08□□□□□ -0.32
APP-215ENST00000474136 TNXBP22105 4242 aa13.07□□□□□ -0.32
APP-215ENST00000474136 LINC00269Q8N2A0 174 aa13.07□□□□□ -0.32
APP-215ENST00000474136 PRR34Q9NV39 138 aa13.07□□□□□ -0.32
APP-215ENST00000474136 KLK12Q9UKR0 248 aa13.07□□□□□ -0.32
APP-215ENST00000474136 CRPP02741 224 aa13.06□□□□□ -0.32
APP-215ENST00000474136 REG3AQ06141 175 aa13.06□□□□□ -0.32
APP-215ENST00000474136 SS18Q15532 418 aa13.06□□□□□ -0.32
APP-215ENST00000474136 TRAV8-4A0A0B4J246 113 aa13.05□□□□□ -0.32
APP-215ENST00000474136 H0Y8G0 127 aa13.05□□□□□ -0.32
APP-215ENST00000474136 RMI2Q96E14 147 aa13.05□□□□□ -0.32
APP-215ENST00000474136 CHTOPQ9Y3Y2 248 aaKnown RBP13.05□□□□□ -0.32
APP-215ENST00000474136 F8VRH5 84 aa13.04□□□□□ -0.32
APP-215ENST00000474136 MIAQ16674 131 aa13.04□□□□□ -0.32
APP-215ENST00000474136 RNASE13Q5GAN3 156 aaKnown RBP13.04□□□□□ -0.32
APP-215ENST00000474136 UBE2D1P51668 147 aa13.03□□□□□ -0.32
APP-215ENST00000474136 ODF1Q14990 250 aa13.03□□□□□ -0.32
APP-215ENST00000474136 LINC01545Q5VT33 79 aa13.03□□□□□ -0.32
APP-215ENST00000474136 FAM19A3Q7Z5A8 133 aa13.03□□□□□ -0.32
APP-215ENST00000474136 TRAV13-1A0A0B4J241 112 aa13.02□□□□□ -0.33
APP-215ENST00000474136 LINC00959A0A1B0GUT2 108 aa13.02□□□□□ -0.33
APP-215ENST00000474136 PLNP26678 52 aa13.02□□□□□ -0.33
APP-215ENST00000474136 TINCRA0A1B0GVN0 87 aa13.01□□□□□ -0.33
APP-215ENST00000474136 UBE2WQ96B02 151 aa13.01□□□□□ -0.33
APP-215ENST00000474136 IGKV3OR2-268A0A0C4DH90 116 aa13□□□□□ -0.33
APP-215ENST00000474136 DPM2O94777 84 aa13□□□□□ -0.33
APP-215ENST00000474136 HERVK_113P63121 156 aa13□□□□□ -0.33
APP-215ENST00000474136 ENHOQ6UWT2 76 aa13□□□□□ -0.33
APP-215ENST00000474136 GEMIN7Q9H840 131 aaKnown RBP13□□□□□ -0.33
APP-215ENST00000474136 MRPL35Q9NZE8 188 aaKnown RBP13□□□□□ -0.33
APP-215ENST00000474136 LOC105371267A0A1B0GV96 52 aa12.99□□□□□ -0.33
APP-215ENST00000474136 SCGB1D1O95968 90 aa12.99□□□□□ -0.33
APP-215ENST00000474136 IGLC3P0DOY3 106 aa12.99□□□□□ -0.33
APP-215ENST00000474136 JOSD1Q15040 202 aaPredicted RBP12.99□□□□□ -0.33
APP-215ENST00000474136 ZC2HC1BQ5TFG8 222 aa12.99□□□□□ -0.33
APP-215ENST00000474136 IGKCP01834 107 aa12.97□□□□□ -0.33
APP-215ENST00000474136 LINC00242Q5T6M2 205 aa12.97□□□□□ -0.33
APP-215ENST00000474136 CLPSL2Q6UWE3 100 aa12.97□□□□□ -0.33
APP-215ENST00000474136 A0A0J9YXV3 536 aa12.96□□□□□ -0.33
APP-215ENST00000474136 CD164L2Q6UWJ8 174 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms