RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 IGKV2D-24A0A075B6R9 120 aa6.98□□□□□ -1.29
PRPF38A-202ENST00000474048 COX7A2LO14548 114 aa6.98□□□□□ -1.29
PRPF38A-202ENST00000474048 APOMO95445 188 aa6.98□□□□□ -1.29
PRPF38A-202ENST00000474048 NMUP48645 174 aa6.98□□□□□ -1.29
PRPF38A-202ENST00000474048 CASC10Q5T4H9 136 aa6.98□□□□□ -1.29
PRPF38A-202ENST00000474048 LINC00242Q5T6M2 205 aa6.98□□□□□ -1.29
PRPF38A-202ENST00000474048 CHCHD10Q8WYQ3 142 aaPredicted RBP6.98□□□□□ -1.29
PRPF38A-202ENST00000474048 COX11Q9Y6N1 276 aa6.98□□□□□ -1.29
PRPF38A-202ENST00000474048 hDV102S1A0JD36 115 aa6.97□□□□□ -1.29
PRPF38A-202ENST00000474048 TSTD3H0UI37 97 aa6.97□□□□□ -1.29
PRPF38A-202ENST00000474048 PSCAO43653 123 aa6.97□□□□□ -1.29
PRPF38A-202ENST00000474048 LY6G6CO95867 125 aa6.97□□□□□ -1.29
PRPF38A-202ENST00000474048 PRSS2P07478 247 aa6.97□□□□□ -1.29
PRPF38A-202ENST00000474048 ZNF22P17026 224 aaPredicted RBP6.97□□□□□ -1.29
PRPF38A-202ENST00000474048 LGALS3P17931 250 aaKnown RBP6.97□□□□□ -1.29
PRPF38A-202ENST00000474048 CD164L2Q6UWJ8 174 aa6.97□□□□□ -1.29
PRPF38A-202ENST00000474048 FAM19A3Q7Z5A8 133 aa6.97□□□□□ -1.29
PRPF38A-202ENST00000474048 TM2D2Q9BX73 214 aa6.97□□□□□ -1.29
PRPF38A-202ENST00000474048 PRR34Q9NV39 138 aa6.97□□□□□ -1.29
PRPF38A-202ENST00000474048 FBN3Q75N90 2809 aa6.97□□□□□ -1.29
PRPF38A-202ENST00000474048 GAGE12HA6NDE8 117 aa6.96□□□□□ -1.3
PRPF38A-202ENST00000474048 IBA57-AS1B1ANH7 110 aa6.96□□□□□ -1.3
PRPF38A-202ENST00000474048 LCE2BO14633 110 aa6.96□□□□□ -1.3
PRPF38A-202ENST00000474048 SPINK8P0C7L1 97 aa6.96□□□□□ -1.3
PRPF38A-202ENST00000474048 LINC00518Q8N0U6 118 aa6.96□□□□□ -1.3
PRPF38A-202ENST00000474048 STPG4Q8N801 248 aa6.96□□□□□ -1.3
PRPF38A-202ENST00000474048 FAM104AQ969W3 186 aa6.96□□□□□ -1.3
PRPF38A-202ENST00000474048 PLEKHB2Q96CS7 222 aa6.96□□□□□ -1.3
PRPF38A-202ENST00000474048 CDKN2A-AS1Q9UH64 79 aa6.96□□□□□ -1.3
PRPF38A-202ENST00000474048 DNAH9Q9NYC9 4486 aa6.95□□□□□ -1.3
PRPF38A-202ENST00000474048 IGHV3-64A0A075B6Q5 118 aa6.95□□□□□ -1.3
PRPF38A-202ENST00000474048 CFAP161Q6P656 301 aa6.95□□□□□ -1.3
PRPF38A-202ENST00000474048 ENHOQ6UWT2 76 aa6.95□□□□□ -1.3
PRPF38A-202ENST00000474048 C5orf38Q86SI9 138 aa6.95□□□□□ -1.3
PRPF38A-202ENST00000474048 TOMM7Q9P0U1 55 aa6.95□□□□□ -1.3
PRPF38A-202ENST00000474048 IGLV5-45A0A087WSX0 123 aa6.94□□□□□ -1.3
PRPF38A-202ENST00000474048 NBDYA0A0U1RRE5 68 aa6.94□□□□□ -1.3
PRPF38A-202ENST00000474048 TMEM223A0PJW6 202 aa6.94□□□□□ -1.3
PRPF38A-202ENST00000474048 E9PLD3 99 aa6.94□□□□□ -1.3
PRPF38A-202ENST00000474048 A0A087WZ39 114 aa6.93□□□□□ -1.3
PRPF38A-202ENST00000474048 IGHV1-58A0A0C4DH39 117 aa6.93□□□□□ -1.3
PRPF38A-202ENST00000474048 LEPROTO15243 131 aa6.93□□□□□ -1.3
PRPF38A-202ENST00000474048 SMCPP49901 116 aaPredicted RBP6.93□□□□□ -1.3
PRPF38A-202ENST00000474048 COX6A2Q02221 97 aa6.93□□□□□ -1.3
PRPF38A-202ENST00000474048 MAJINQ3KP22 176 aa6.93□□□□□ -1.3
PRPF38A-202ENST00000474048 LINC01561Q8N1V8 128 aa6.93□□□□□ -1.3
PRPF38A-202ENST00000474048 PRKDCP78527 4128 aaKnown RBP6.92□□□□□ -1.3
PRPF38A-202ENST00000474048 IGHV3OR16-9A0A0B4J2B5 98 aa6.92□□□□□ -1.3
PRPF38A-202ENST00000474048 J3QQQ9 107 aa6.92□□□□□ -1.3
PRPF38A-202ENST00000474048 CKS1BP61024 79 aa6.92□□□□□ -1.3
PRPF38A-202ENST00000474048 ANKRD39Q53RE8 183 aa6.92□□□□□ -1.3
PRPF38A-202ENST00000474048 CDPF1Q6NVV7 123 aa6.92□□□□□ -1.3
PRPF38A-202ENST00000474048 SLC25A34Q6PIV7 304 aa6.92□□□□□ -1.3
PRPF38A-202ENST00000474048 SFTA2Q6UW10 78 aa6.92□□□□□ -1.3
PRPF38A-202ENST00000474048 SCGB1D4Q6XE38 83 aa6.92□□□□□ -1.3
PRPF38A-202ENST00000474048 ORAOV1Q8WV07 137 aa6.92□□□□□ -1.3
PRPF38A-202ENST00000474048 LINC00476Q8WZB0 136 aa6.92□□□□□ -1.3
PRPF38A-202ENST00000474048 MYMXA0A1B0GTQ4 84 aa6.91□□□□□ -1.3
PRPF38A-202ENST00000474048 ZNF815PA8K554 130 aa6.91□□□□□ -1.3
PRPF38A-202ENST00000474048 SMIM1B2RUZ4 78 aa6.91□□□□□ -1.3
PRPF38A-202ENST00000474048 ZNF561-AS1K7EIQ3 104 aa6.91□□□□□ -1.3
PRPF38A-202ENST00000474048 M0R2N4 97 aa6.91□□□□□ -1.3
PRPF38A-202ENST00000474048 FOXI1Q12951 378 aa6.91□□□□□ -1.3
PRPF38A-202ENST00000474048 C6orf226Q5I0X4 101 aa6.91□□□□□ -1.3
PRPF38A-202ENST00000474048 COX7B2Q8TF08 81 aa6.91□□□□□ -1.3
PRPF38A-202ENST00000474048 UQCR10Q9UDW1 63 aa6.91□□□□□ -1.3
PRPF38A-202ENST00000474048 COX8AP10176 69 aa6.9□□□□□ -1.3
PRPF38A-202ENST00000474048 CXCL5P42830 114 aa6.9□□□□□ -1.3
PRPF38A-202ENST00000474048 SPAG11BQ08648 103 aa6.9□□□□□ -1.3
PRPF38A-202ENST00000474048 C14orf144Q96I85 54 aa6.9□□□□□ -1.3
PRPF38A-202ENST00000474048 PRO1933Q9H354 126 aa6.9□□□□□ -1.3
PRPF38A-202ENST00000474048 Q8IZM0 81 aa6.89□□□□□ -1.31
PRPF38A-202ENST00000474048 NDUFA12Q9UI09 145 aa6.89□□□□□ -1.31
PRPF38A-202ENST00000474048 HNRNPA3P51991 378 aaKnown RBP6.88□□□□□ -1.31
PRPF38A-202ENST00000474048 HERV-K104P63124 156 aa6.88□□□□□ -1.31
PRPF38A-202ENST00000474048 CIRBPQ14011 172 aaKnown RBP6.88□□□□□ -1.31
PRPF38A-202ENST00000474048 C14orf177Q52M58 125 aa6.88□□□□□ -1.31
PRPF38A-202ENST00000474048 MEIG1Q5JSS6 88 aa6.88□□□□□ -1.31
PRPF38A-202ENST00000474048 IGKV2D-26A0A0A0MRZ7 120 aa6.87□□□□□ -1.31
PRPF38A-202ENST00000474048 IGLV5-39A0A0G2JS06 123 aa6.87□□□□□ -1.31
PRPF38A-202ENST00000474048 LINC00587B1AMM8 73 aa6.87□□□□□ -1.31
PRPF38A-202ENST00000474048 GCSHP23434 173 aa6.87□□□□□ -1.31
PRPF38A-202ENST00000474048 C6orf223Q8N319 242 aa6.87□□□□□ -1.31
PRPF38A-202ENST00000474048 NDUFA1O15239 70 aa6.86□□□□□ -1.31
PRPF38A-202ENST00000474048 HIGD2BQ4VC39 106 aa6.86□□□□□ -1.31
PRPF38A-202ENST00000474048 C1orf134Q5TEV5 83 aa6.86□□□□□ -1.31
PRPF38A-202ENST00000474048 PCP2Q8IVA1 136 aa6.86□□□□□ -1.31
PRPF38A-202ENST00000474048 CAMK2N2Q96S95 79 aa6.86□□□□□ -1.31
PRPF38A-202ENST00000474048 MIEN1Q9BRT3 115 aa6.86□□□□□ -1.31
PRPF38A-202ENST00000474048 TGP01266 2768 aa6.86□□□□□ -1.31
PRPF38A-202ENST00000474048 PCP4L1A6NKN8 68 aa6.85□□□□□ -1.31
PRPF38A-202ENST00000474048 TMEM238C9JI98 176 aa6.85□□□□□ -1.31
PRPF38A-202ENST00000474048 USP17L23D6RBM5 183 aa6.85□□□□□ -1.31
PRPF38A-202ENST00000474048 EREGO14944 169 aa6.85□□□□□ -1.31
PRPF38A-202ENST00000474048 DLEU1O43261 78 aa6.85□□□□□ -1.31
PRPF38A-202ENST00000474048 BOD1L2Q8IYS8 172 aa6.85□□□□□ -1.31
PRPF38A-202ENST00000474048 KRTAP1-5Q9BYS1 174 aa6.85□□□□□ -1.31
PRPF38A-202ENST00000474048 F8WDY8 70 aa6.84□□□□□ -1.31
PRPF38A-202ENST00000474048 TSPEAR-AS2P59090 65 aa6.84□□□□□ -1.31
PRPF38A-202ENST00000474048 SRSF9Q13242 221 aaKnown RBP eCLIP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms