RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 C2orf48Q96LS8 159 aa3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 CAMK2N2Q96S95 79 aa3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 OPRPNQ99935 248 aaPredicted RBP3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 CDC42SE2Q9NRR3 84 aa3.06□□□□□ -1.92
SNRNP40-204ENST00000474025 TRAV1-1A0A0B4J248 108 aa3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 TRBV6-5A0A0K0K1A5 114 aa3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 FAM168BA1KXE4 195 aa3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 RAB19A4D1S5 217 aa3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 C1orf196B1AJZ1 125 aa3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 I3L3M4 83 aa3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 ARPC5O15511 151 aa3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 GNG4P50150 75 aa3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 UBE2D1P51668 147 aa3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 FOXA3P55318 350 aaPredicted RBP3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 CCL20P78556 96 aa3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 TEX261Q6UWH6 196 aa3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 TSKUQ8WUA8 353 aa3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 ALKBH7Q9BT30 221 aaPredicted RBP3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 MANBALQ9NQG1 85 aa3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 TMEM242Q9NWH2 141 aa3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 GNG13Q9P2W3 67 aa3.05□□□□□ -1.92
SNRNP40-204ENST00000474025 C7orf77A4D0Y5 90 aa3.04□□□□□ -1.92
SNRNP40-204ENST00000474025 PMCHP20382 165 aa3.04□□□□□ -1.92
SNRNP40-204ENST00000474025 BLOC1S1P78537 153 aa3.04□□□□□ -1.92
SNRNP40-204ENST00000474025 SPAG11BQ08648 103 aa3.04□□□□□ -1.92
SNRNP40-204ENST00000474025 LBHQ53QV2 105 aaPredicted RBP3.04□□□□□ -1.92
SNRNP40-204ENST00000474025 C5orf38Q86SI9 138 aa3.04□□□□□ -1.92
SNRNP40-204ENST00000474025 KRTAP7-1Q8IUC3 87 aa3.04□□□□□ -1.92
SNRNP40-204ENST00000474025 RNASE7Q9H1E1 156 aaKnown RBP3.04□□□□□ -1.92
SNRNP40-204ENST00000474025 RPP21Q9H633 154 aaKnown RBP3.04□□□□□ -1.92
SNRNP40-204ENST00000474025 TRAV13-1A0A0B4J241 112 aa3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 TRBV27A0A0K0K1C4 114 aa3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 SMLR1H3BR10 107 aa3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 K7EN84 100 aa3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 TSPAN13O95857 204 aa3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 TLX1NBP0CAT3 122 aa3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 POLR2KP53803 58 aaKnown RBP3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 ZNF345Q14585 488 aa3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 RNASE13Q5GAN3 156 aaKnown RBP3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 SMIM15Q7Z3B0 74 aa3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 FAM19A5Q7Z5A7 132 aaPredicted RBP3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 OR10D4PQ8NGN7 298 aa3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 IMMP2LQ96T52 175 aa3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 ST20Q9HBF5 79 aa3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 BIN3Q9NQY0 253 aa3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 MRPL35Q9NZE8 188 aaKnown RBP3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 CARHSP1Q9Y2V2 147 aaKnown RBP3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 CSDC2Q9Y534 153 aaKnown RBP3.03□□□□□ -1.92
SNRNP40-204ENST00000474025 A0A0U1RRA0 63 aa3.02□□□□□ -1.93
SNRNP40-204ENST00000474025 M0QXV9 152 aa3.02□□□□□ -1.93
SNRNP40-204ENST00000474025 PDE6DO43924 150 aa3.02□□□□□ -1.93
SNRNP40-204ENST00000474025 LINC01547P58512 204 aaPredicted RBP3.02□□□□□ -1.93
SNRNP40-204ENST00000474025 RGS21Q2M5E4 152 aa3.02□□□□□ -1.93
SNRNP40-204ENST00000474025 C10orf25Q5T742 122 aa3.02□□□□□ -1.93
SNRNP40-204ENST00000474025 Q6ZUT4 128 aa3.02□□□□□ -1.93
SNRNP40-204ENST00000474025 SMDT1Q9H4I9 107 aa3.02□□□□□ -1.93
SNRNP40-204ENST00000474025 MED9Q9NWA0 146 aa3.02□□□□□ -1.93
SNRNP40-204ENST00000474025 UBE2D4Q9Y2X8 147 aa3.02□□□□□ -1.93
SNRNP40-204ENST00000474025 A0A087X002 238 aa3.01□□□□□ -1.93
SNRNP40-204ENST00000474025 IGHV3OR16-9A0A0B4J2B5 98 aa3.01□□□□□ -1.93
SNRNP40-204ENST00000474025 VCYO14598 125 aa3.01□□□□□ -1.93
SNRNP40-204ENST00000474025 NDUFA1O15239 70 aa3.01□□□□□ -1.93
SNRNP40-204ENST00000474025 ZNF861PO60384 105 aa3.01□□□□□ -1.93
SNRNP40-204ENST00000474025 SNRPEP62304 92 aaKnown RBP3.01□□□□□ -1.93
SNRNP40-204ENST00000474025 UBE2BP63146 152 aa3.01□□□□□ -1.93
SNRNP40-204ENST00000474025 GAGE2EQ4V326 116 aa3.01□□□□□ -1.93
SNRNP40-204ENST00000474025 UNQ6190/PRO20217Q6UXQ8 127 aa3.01□□□□□ -1.93
SNRNP40-204ENST00000474025 ERASQ7Z444 233 aa3.01□□□□□ -1.93
SNRNP40-204ENST00000474025 ORAOV1Q8WV07 137 aa3.01□□□□□ -1.93
SNRNP40-204ENST00000474025 GEMIN7Q9H840 131 aaKnown RBP3.01□□□□□ -1.93
SNRNP40-204ENST00000474025 C6orf48Q9UBA6 75 aa3.01□□□□□ -1.93
SNRNP40-204ENST00000474025 GAGE2DQ9UEU5 116 aa3.01□□□□□ -1.93
SNRNP40-204ENST00000474025 KANTRA0A1W2PQU2 76 aa3□□□□□ -1.93
SNRNP40-204ENST00000474025 HMSDA8MTL9 139 aa3□□□□□ -1.93
SNRNP40-204ENST00000474025 FCER1GP30273 86 aa3□□□□□ -1.93
SNRNP40-204ENST00000474025 SMAGPQ0VAQ4 97 aa3□□□□□ -1.93
SNRNP40-204ENST00000474025 TPRXLQ17RH7 258 aa3□□□□□ -1.93
SNRNP40-204ENST00000474025 TMEM241Q24JQ0 296 aa3□□□□□ -1.93
SNRNP40-204ENST00000474025 C9orf129Q5T035 196 aaKnown RBP3□□□□□ -1.93
SNRNP40-204ENST00000474025 FAM104AQ969W3 186 aa3□□□□□ -1.93
SNRNP40-204ENST00000474025 TIMM21Q9BVV7 248 aa3□□□□□ -1.93
SNRNP40-204ENST00000474025 TMEM191AQ9H0A3 160 aa3□□□□□ -1.93
SNRNP40-204ENST00000474025 A8MWL6 223 aa2.99□□□□□ -1.93
SNRNP40-204ENST00000474025 NDUFC2-KCTD14E9PQ53 114 aa2.99□□□□□ -1.93
SNRNP40-204ENST00000474025 SMKR1H3BMG3 65 aa2.99□□□□□ -1.93
SNRNP40-204ENST00000474025 TEX46H3BTG2 121 aa2.99□□□□□ -1.93
SNRNP40-204ENST00000474025 GATCO43716 136 aaKnown RBP2.99□□□□□ -1.93
SNRNP40-204ENST00000474025 RAB4AP20338 218 aa2.99□□□□□ -1.93
SNRNP40-204ENST00000474025 SEC61GP60059 68 aa2.99□□□□□ -1.93
SNRNP40-204ENST00000474025 KIAA0087Q14695 138 aa2.99□□□□□ -1.93
SNRNP40-204ENST00000474025 AMN1Q8IY45 258 aa2.99□□□□□ -1.93
SNRNP40-204ENST00000474025 NRACQ8N912 160 aa2.99□□□□□ -1.93
SNRNP40-204ENST00000474025 TYMSOSQ8TAI1 123 aa2.99□□□□□ -1.93
SNRNP40-204ENST00000474025 KIR2DL4Q99706 377 aa2.99□□□□□ -1.93
SNRNP40-204ENST00000474025 RETNLBQ9BQ08 111 aa2.99□□□□□ -1.93
SNRNP40-204ENST00000474025 TRBV30A0A0K0K1B3 111 aa2.98□□□□□ -1.93
SNRNP40-204ENST00000474025 A0A1B0GUT8 65 aa2.98□□□□□ -1.93
SNRNP40-204ENST00000474025 HIGD1CA8MV81 97 aa2.98□□□□□ -1.93
SNRNP40-204ENST00000474025 NUPR1O60356 82 aa2.98□□□□□ -1.93
SNRNP40-204ENST00000474025 CRYGAP11844 174 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms