RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 LINC01546A6NGU7 62 aa11.66□□□□□ -0.54
SNX4-204ENST00000473417 IGIPA6NJ69 53 aa11.66□□□□□ -0.54
SNX4-204ENST00000473417 ZC2HC1BQ5TFG8 222 aa11.66□□□□□ -0.54
SNX4-204ENST00000473417 C18orf32Q8TCD1 76 aa11.66□□□□□ -0.54
SNX4-204ENST00000473417 TOMM6Q96B49 74 aa11.66□□□□□ -0.54
SNX4-204ENST00000473417 IGHV1-58A0A0C4DH39 117 aa11.65□□□□□ -0.54
SNX4-204ENST00000473417 SLPIP03973 132 aa11.65□□□□□ -0.54
SNX4-204ENST00000473417 Q6ZN92 141 aa11.65□□□□□ -0.54
SNX4-204ENST00000473417 TEX43Q6ZNM6 134 aa11.65□□□□□ -0.54
SNX4-204ENST00000473417 C5orf38Q86SI9 138 aa11.65□□□□□ -0.54
SNX4-204ENST00000473417 COX7A2LO14548 114 aa11.64□□□□□ -0.55
SNX4-204ENST00000473417 MALP21145 153 aa11.64□□□□□ -0.55
SNX4-204ENST00000473417 CIRBP-AS1Q8TBR5 109 aa11.64□□□□□ -0.55
SNX4-204ENST00000473417 VCX2Q9H322 139 aa11.64□□□□□ -0.55
SNX4-204ENST00000473417 GVQW2A0A096LPI5 108 aaPredicted RBP11.63□□□□□ -0.55
SNX4-204ENST00000473417 CNBPP62633 177 aaKnown RBP11.63□□□□□ -0.55
SNX4-204ENST00000473417 C9orf163Q8N9P6 203 aa11.63□□□□□ -0.55
SNX4-204ENST00000473417 LINC00526Q96FQ7 95 aa11.63□□□□□ -0.55
SNX4-204ENST00000473417 URB1-AS1Q96HZ7 61 aa11.63□□□□□ -0.55
SNX4-204ENST00000473417 SCGB3A1Q96QR1 104 aa11.63□□□□□ -0.55
SNX4-204ENST00000473417 NPSP0C0P6 89 aa11.62□□□□□ -0.55
SNX4-204ENST00000473417 LINC00614P0C842 121 aa11.62□□□□□ -0.55
SNX4-204ENST00000473417 LINC00173Q6ZV60 143 aa11.62□□□□□ -0.55
SNX4-204ENST00000473417 AMELXQ99217 191 aa11.62□□□□□ -0.55
SNX4-204ENST00000473417 TIMM17AQ99595 171 aa11.62□□□□□ -0.55
SNX4-204ENST00000473417 C2orf88Q9BSF0 95 aa11.62□□□□□ -0.55
SNX4-204ENST00000473417 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.61□□□□□ -0.55
SNX4-204ENST00000473417 KRTAP10-4P60372 401 aaPredicted RBP11.61□□□□□ -0.55
SNX4-204ENST00000473417 LINC00242Q5T6M2 205 aa11.61□□□□□ -0.55
SNX4-204ENST00000473417 ERASQ7Z444 233 aa11.61□□□□□ -0.55
SNX4-204ENST00000473417 IGHV3OR16-9A0A0B4J2B5 98 aa11.6□□□□□ -0.55
SNX4-204ENST00000473417 J3QL48 77 aa11.6□□□□□ -0.55
SNX4-204ENST00000473417 UBE2D1P51668 147 aa11.6□□□□□ -0.55
SNX4-204ENST00000473417 PAPPA-AS1Q5QFB9 102 aa11.6□□□□□ -0.55
SNX4-204ENST00000473417 COLCA2A8K830 154 aa11.59□□□□□ -0.55
SNX4-204ENST00000473417 ZNF561-AS1K7EIQ3 104 aa11.59□□□□□ -0.55
SNX4-204ENST00000473417 SCO1O75880 301 aa11.59□□□□□ -0.55
SNX4-204ENST00000473417 TRGC2P03986 189 aa11.59□□□□□ -0.55
SNX4-204ENST00000473417 COX6A2Q02221 97 aa11.59□□□□□ -0.55
SNX4-204ENST00000473417 LINC01549A6NIU2 74 aa11.58□□□□□ -0.56
SNX4-204ENST00000473417 APOMO95445 188 aa11.58□□□□□ -0.56
SNX4-204ENST00000473417 RAB5BP61020 215 aa11.58□□□□□ -0.56
SNX4-204ENST00000473417 PMCHL1Q16048 86 aa11.58□□□□□ -0.56
SNX4-204ENST00000473417 IGHV3-64A0A075B6Q5 118 aa11.57□□□□□ -0.56
SNX4-204ENST00000473417 A0A096LNJ9 63 aa11.57□□□□□ -0.56
SNX4-204ENST00000473417 SDIM1Q6ZPB5 146 aa11.57□□□□□ -0.56
SNX4-204ENST00000473417 IGLV4-69A0A075B6H9 119 aa11.56□□□□□ -0.56
SNX4-204ENST00000473417 LRP1Q07954 4544 aaKnown RBP11.56□□□□□ -0.56
SNX4-204ENST00000473417 PKHD1L1Q86WI1 4243 aa11.56□□□□□ -0.56
SNX4-204ENST00000473417 KRTAP29-1A8MX34 341 aaPredicted RBP11.55□□□□□ -0.56
SNX4-204ENST00000473417 ORAOV1Q8WV07 137 aa11.55□□□□□ -0.56
SNX4-204ENST00000473417 A0A087WZ39 114 aa11.54□□□□□ -0.56
SNX4-204ENST00000473417 HBDP02042 147 aa11.54□□□□□ -0.56
SNX4-204ENST00000473417 SPAG11BQ08648 103 aa11.54□□□□□ -0.56
SNX4-204ENST00000473417 SYCNQ0VAF6 134 aa11.54□□□□□ -0.56
SNX4-204ENST00000473417 CARD19Q96LW7 228 aa11.54□□□□□ -0.56
SNX4-204ENST00000473417 FAT3Q8TDW7 4589 aa11.53□□□□□ -0.56
SNX4-204ENST00000473417 A0A0J9YXV3 536 aa11.53□□□□□ -0.56
SNX4-204ENST00000473417 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.53□□□□□ -0.56
SNX4-204ENST00000473417 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.53□□□□□ -0.56
SNX4-204ENST00000473417 PANO1I0J062 215 aa11.52□□□□□ -0.57
SNX4-204ENST00000473417 PMVKQ15126 192 aa11.52□□□□□ -0.57
SNX4-204ENST00000473417 FAM19A3Q7Z5A8 133 aa11.52□□□□□ -0.57
SNX4-204ENST00000473417 BAGE3Q86Y29 109 aa11.52□□□□□ -0.57
SNX4-204ENST00000473417 OR10D4PQ8NGN7 298 aa11.52□□□□□ -0.57
SNX4-204ENST00000473417 CHCHD1Q96BP2 118 aaKnown RBP11.52□□□□□ -0.57
SNX4-204ENST00000473417 CAMK2N2Q96S95 79 aa11.52□□□□□ -0.57
SNX4-204ENST00000473417 CST9LQ9H4G1 147 aa11.52□□□□□ -0.57
SNX4-204ENST00000473417 GEMIN7Q9H840 131 aaKnown RBP11.52□□□□□ -0.57
SNX4-204ENST00000473417 HERVK_113P63121 156 aa11.51□□□□□ -0.57
SNX4-204ENST00000473417 SEC11AP67812 179 aa11.51□□□□□ -0.57
SNX4-204ENST00000473417 PDZD11Q5EBL8 140 aa11.51□□□□□ -0.57
SNX4-204ENST00000473417 Q6ZRU5 148 aa11.51□□□□□ -0.57
SNX4-204ENST00000473417 CHTF8P0CG12 524 aa11.5□□□□□ -0.57
SNX4-204ENST00000473417 NDUFA6P56556 154 aa11.5□□□□□ -0.57
SNX4-204ENST00000473417 C2orf48Q96LS8 159 aa11.5□□□□□ -0.57
SNX4-204ENST00000473417 CDKN2A-AS1Q9UH64 79 aa11.5□□□□□ -0.57
SNX4-204ENST00000473417 CIRBPQ14011 172 aaKnown RBP11.49□□□□□ -0.57
SNX4-204ENST00000473417 DPH3Q96FX2 82 aa11.49□□□□□ -0.57
SNX4-204ENST00000473417 HSBP1O75506 76 aa11.48□□□□□ -0.57
SNX4-204ENST00000473417 ATP5LO75964 103 aa11.48□□□□□ -0.57
SNX4-204ENST00000473417 RPL37AP61513 92 aaKnown RBP11.48□□□□□ -0.57
SNX4-204ENST00000473417 LINC01561Q8N1V8 128 aa11.48□□□□□ -0.57
SNX4-204ENST00000473417 IGKV2-24A0A0C4DH68 120 aa11.47□□□□□ -0.57
SNX4-204ENST00000473417 TINCRA0A1B0GVN0 87 aa11.47□□□□□ -0.57
SNX4-204ENST00000473417 LINC00469Q8N7U9 141 aa11.47□□□□□ -0.57
SNX4-204ENST00000473417 KIAA0087Q14695 138 aa11.46□□□□□ -0.57
SNX4-204ENST00000473417 FAM19A2Q8N3H0 131 aa11.46□□□□□ -0.57
SNX4-204ENST00000473417 PACRGQ96M98 296 aaPredicted RBP11.46□□□□□ -0.57
SNX4-204ENST00000473417 A0A096LNI7 61 aa11.45□□□□□ -0.58
SNX4-204ENST00000473417 NDUFA1O15239 70 aa11.45□□□□□ -0.58
SNX4-204ENST00000473417 SERF1AO75920 110 aa11.45□□□□□ -0.58
SNX4-204ENST00000473417 C10orf25Q5T742 122 aa11.45□□□□□ -0.58
SNX4-204ENST00000473417 UNQ6190/PRO20217Q6UXQ8 127 aa11.45□□□□□ -0.58
SNX4-204ENST00000473417 TOMM7Q9P0U1 55 aa11.45□□□□□ -0.58
SNX4-204ENST00000473417 OXTP01178 125 aa11.44□□□□□ -0.58
SNX4-204ENST00000473417 LINC00310P59036 64 aa11.44□□□□□ -0.58
SNX4-204ENST00000473417 MAJINQ3KP22 176 aa11.44□□□□□ -0.58
SNX4-204ENST00000473417 SPACA4Q8TDM5 124 aa11.44□□□□□ -0.58
SNX4-204ENST00000473417 F8WDY8 70 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms