RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 CDC42SE2Q9NRR3 84 aa8.63□□□□□ -1.03
TPM3-216ENST00000473036 EPM2AB3EWF7 344 aa8.62□□□□□ -1.03
TPM3-216ENST00000473036 PRSS1P07477 247 aa8.62□□□□□ -1.03
TPM3-216ENST00000473036 HIST3H2BBQ8N257 126 aa8.62□□□□□ -1.03
TPM3-216ENST00000473036 FAM104AQ969W3 186 aa8.62□□□□□ -1.03
TPM3-216ENST00000473036 IFI27L1Q96BM0 104 aa8.62□□□□□ -1.03
TPM3-216ENST00000473036 TMA7Q9Y2S6 64 aaKnown RBP8.62□□□□□ -1.03
TPM3-216ENST00000473036 IGLV10-54A0A075B6I4 117 aa8.61□□□□□ -1.03
TPM3-216ENST00000473036 A0A096LNJ9 63 aa8.61□□□□□ -1.03
TPM3-216ENST00000473036 TRAV8-4A0A0B4J246 113 aa8.61□□□□□ -1.03
TPM3-216ENST00000473036 NUPR1O60356 82 aa8.61□□□□□ -1.03
TPM3-216ENST00000473036 CRPP02741 224 aa8.61□□□□□ -1.03
TPM3-216ENST00000473036 PMCHL1Q16048 86 aa8.61□□□□□ -1.03
TPM3-216ENST00000473036 MIAQ16674 131 aa8.61□□□□□ -1.03
TPM3-216ENST00000473036 COX11Q9Y6N1 276 aa8.61□□□□□ -1.03
TPM3-216ENST00000473036 TRAV12-1A0A0B4J245 112 aa8.6□□□□□ -1.03
TPM3-216ENST00000473036 FABP4P15090 132 aa8.6□□□□□ -1.03
TPM3-216ENST00000473036 KRTAP10-1P60331 282 aa8.6□□□□□ -1.03
TPM3-216ENST00000473036 PMVKQ15126 192 aa8.6□□□□□ -1.03
TPM3-216ENST00000473036 NTN5Q8WTR8 489 aaPredicted RBP8.6□□□□□ -1.03
TPM3-216ENST00000473036 RMI2Q96E14 147 aa8.6□□□□□ -1.03
TPM3-216ENST00000473036 C1orf43Q9BWL3 253 aa8.6□□□□□ -1.03
TPM3-216ENST00000473036 PKHD1L1Q86WI1 4243 aa8.59□□□□□ -1.03
TPM3-216ENST00000473036 IGLV4-3A0A075B6K6 122 aa8.59□□□□□ -1.03
TPM3-216ENST00000473036 SS18Q15532 418 aa8.59□□□□□ -1.03
TPM3-216ENST00000473036 AMELXQ99217 191 aa8.59□□□□□ -1.03
TPM3-216ENST00000473036 PGPEP1Q9NXJ5 209 aa8.59□□□□□ -1.03
TPM3-216ENST00000473036 C20orf202A1L168 122 aa8.58□□□□□ -1.04
TPM3-216ENST00000473036 EREGO14944 169 aa8.58□□□□□ -1.04
TPM3-216ENST00000473036 PET117Q6UWS5 81 aa8.58□□□□□ -1.04
TPM3-216ENST00000473036 HIST1H2BLQ99880 126 aa8.58□□□□□ -1.04
TPM3-216ENST00000473036 IGKV3OR2-268A0A0C4DH90 116 aa8.57□□□□□ -1.04
TPM3-216ENST00000473036 IFITM10A6NMD0 228 aa8.57□□□□□ -1.04
TPM3-216ENST00000473036 INAFM2P0DMQ5 153 aa8.57□□□□□ -1.04
TPM3-216ENST00000473036 CDPF1Q6NVV7 123 aa8.57□□□□□ -1.04
TPM3-216ENST00000473036 CST9LQ9H4G1 147 aa8.57□□□□□ -1.04
TPM3-216ENST00000473036 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.56□□□□□ -1.04
TPM3-216ENST00000473036 RNASE13Q5GAN3 156 aaKnown RBP8.56□□□□□ -1.04
TPM3-216ENST00000473036 OPRPNQ99935 248 aaPredicted RBP8.56□□□□□ -1.04
TPM3-216ENST00000473036 IGLV5-52A0A0A0MRZ9 124 aa8.55□□□□□ -1.04
TPM3-216ENST00000473036 USP17L23D6RBM5 183 aa8.55□□□□□ -1.04
TPM3-216ENST00000473036 SYS1-DBNDD2H3BUS1 97 aa8.55□□□□□ -1.04
TPM3-216ENST00000473036 PLNP26678 52 aa8.55□□□□□ -1.04
TPM3-216ENST00000473036 LINC01620Q4KN68 170 aa8.55□□□□□ -1.04
TPM3-216ENST00000473036 Q6ZUT4 128 aa8.55□□□□□ -1.04
TPM3-216ENST00000473036 FAM19A3Q7Z5A8 133 aa8.55□□□□□ -1.04
TPM3-216ENST00000473036 LINC00959A0A1B0GUT2 108 aa8.54□□□□□ -1.04
TPM3-216ENST00000473036 GAGE12HA6NDE8 117 aa8.54□□□□□ -1.04
TPM3-216ENST00000473036 KRTDAPP60985 99 aa8.54□□□□□ -1.04
TPM3-216ENST00000473036 HERVK_113P63121 156 aa8.54□□□□□ -1.04
TPM3-216ENST00000473036 CHCHD10Q8WYQ3 142 aaPredicted RBP8.54□□□□□ -1.04
TPM3-216ENST00000473036 GEMIN7Q9H840 131 aaKnown RBP8.54□□□□□ -1.04
TPM3-216ENST00000473036 CHTOPQ9Y3Y2 248 aaKnown RBP8.54□□□□□ -1.04
TPM3-216ENST00000473036 MYCBP2O75592 4640 aa8.53□□□□□ -1.04
TPM3-216ENST00000473036 TRAV13-1A0A0B4J241 112 aa8.53□□□□□ -1.04
TPM3-216ENST00000473036 TINCRA0A1B0GVN0 87 aa8.53□□□□□ -1.04
TPM3-216ENST00000473036 F8VRH5 84 aa8.53□□□□□ -1.04
TPM3-216ENST00000473036 GCSHP23434 173 aa8.53□□□□□ -1.04
TPM3-216ENST00000473036 UBE2D1P51668 147 aa8.53□□□□□ -1.04
TPM3-216ENST00000473036 XGP55808 180 aa8.53□□□□□ -1.04
TPM3-216ENST00000473036 FOXI1Q12951 378 aa8.53□□□□□ -1.04
TPM3-216ENST00000473036 C15orf56Q8N910 161 aa8.53□□□□□ -1.04
TPM3-216ENST00000473036 FAM30AQ9NZY2 134 aa8.53□□□□□ -1.04
TPM3-216ENST00000473036 SRRM2Q9UQ35 2752 aaKnown RBP8.53□□□□□ -1.04
TPM3-216ENST00000473036 H3BRM9 83 aa8.52□□□□□ -1.05
TPM3-216ENST00000473036 SLPIP03973 132 aa8.52□□□□□ -1.05
TPM3-216ENST00000473036 C3orf79P0CE67 100 aa8.52□□□□□ -1.05
TPM3-216ENST00000473036 CD164L2Q6UWJ8 174 aa8.52□□□□□ -1.05
TPM3-216ENST00000473036 DPM2O94777 84 aa8.51□□□□□ -1.05
TPM3-216ENST00000473036 HAMPP81172 84 aa8.51□□□□□ -1.05
TPM3-216ENST00000473036 LINC00173Q6ZV60 143 aa8.51□□□□□ -1.05
TPM3-216ENST00000473036 LINC01561Q8N1V8 128 aa8.51□□□□□ -1.05
TPM3-216ENST00000473036 OR10D4PQ8NGN7 298 aa8.51□□□□□ -1.05
TPM3-216ENST00000473036 H0Y8G0 127 aa8.5□□□□□ -1.05
TPM3-216ENST00000473036 IGLC3P0DOY3 106 aa8.5□□□□□ -1.05
TPM3-216ENST00000473036 XCL1P47992 114 aa8.5□□□□□ -1.05
TPM3-216ENST00000473036 ODF1Q14990 250 aa8.5□□□□□ -1.05
TPM3-216ENST00000473036 ZC2HC1BQ5TFG8 222 aa8.5□□□□□ -1.05
TPM3-216ENST00000473036 LINC01545Q5VT33 79 aa8.5□□□□□ -1.05
TPM3-216ENST00000473036 CFAP161Q6P656 301 aa8.5□□□□□ -1.05
TPM3-216ENST00000473036 APOMO95445 188 aa8.49□□□□□ -1.05
TPM3-216ENST00000473036 IGKCP01834 107 aa8.49□□□□□ -1.05
TPM3-216ENST00000473036 LINC00242Q5T6M2 205 aa8.49□□□□□ -1.05
TPM3-216ENST00000473036 Q5VSD8 79 aa8.49□□□□□ -1.05
TPM3-216ENST00000473036 A0A0J9YXV3 536 aa8.48□□□□□ -1.05
TPM3-216ENST00000473036 COX7A2LO14548 114 aa8.48□□□□□ -1.05
TPM3-216ENST00000473036 SCGB1D1O95968 90 aa8.48□□□□□ -1.05
TPM3-216ENST00000473036 MRPL35Q9NZE8 188 aaKnown RBP8.48□□□□□ -1.05
TPM3-216ENST00000473036 FAT3Q8TDW7 4589 aa8.48□□□□□ -1.05
TPM3-216ENST00000473036 IGLV5-45A0A087WSX0 123 aa8.47□□□□□ -1.05
TPM3-216ENST00000473036 MALP21145 153 aa8.47□□□□□ -1.05
TPM3-216ENST00000473036 HERVK_113P61574 105 aa8.47□□□□□ -1.05
TPM3-216ENST00000473036 Q6ZSA8 131 aa8.47□□□□□ -1.05
TPM3-216ENST00000473036 LINC00469Q8N7U9 141 aa8.47□□□□□ -1.05
TPM3-216ENST00000473036 CHAC1Q9BUX1 264 aa8.47□□□□□ -1.05
TPM3-216ENST00000473036 A0A087WZ39 114 aa8.46□□□□□ -1.06
TPM3-216ENST00000473036 IGHV3OR16-9A0A0B4J2B5 98 aa8.46□□□□□ -1.06
TPM3-216ENST00000473036 C11orf86A6NJI1 115 aa8.46□□□□□ -1.06
TPM3-216ENST00000473036 HSBP1L1C9JCN9 74 aa8.46□□□□□ -1.06
TPM3-216ENST00000473036 JOSD1Q15040 202 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms