RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 SCGB3A1Q96QR1 104 aa9.23□□□□□ -0.93
BRCA1-211ENST00000472490 DNAH11Q96DT5 4516 aa9.22□□□□□ -0.93
BRCA1-211ENST00000472490 LINC01620Q4KN68 170 aa9.22□□□□□ -0.93
BRCA1-211ENST00000472490 C18orf32Q8TCD1 76 aa9.22□□□□□ -0.93
BRCA1-211ENST00000472490 SEC11AP67812 179 aa9.21□□□□□ -0.94
BRCA1-211ENST00000472490 Q6ZSA8 131 aa9.21□□□□□ -0.94
BRCA1-211ENST00000472490 AMELXQ99217 191 aa9.21□□□□□ -0.94
BRCA1-211ENST00000472490 IGHV3-64A0A075B6Q5 118 aa9.2□□□□□ -0.94
BRCA1-211ENST00000472490 IGHV3OR16-9A0A0B4J2B5 98 aa9.2□□□□□ -0.94
BRCA1-211ENST00000472490 UBE2D1P51668 147 aa9.2□□□□□ -0.94
BRCA1-211ENST00000472490 XGP55808 180 aa9.2□□□□□ -0.94
BRCA1-211ENST00000472490 C5orf38Q86SI9 138 aa9.2□□□□□ -0.94
BRCA1-211ENST00000472490 PKIGQ9Y2B9 76 aa9.2□□□□□ -0.94
BRCA1-211ENST00000472490 LINC00242Q5T6M2 205 aa9.19□□□□□ -0.94
BRCA1-211ENST00000472490 SLPIP03973 132 aa9.18□□□□□ -0.94
BRCA1-211ENST00000472490 OR10D4PQ8NGN7 298 aa9.18□□□□□ -0.94
BRCA1-211ENST00000472490 FAM30AQ9NZY2 134 aa9.18□□□□□ -0.94
BRCA1-211ENST00000472490 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-211ENST00000472490 HBDP02042 147 aa9.17□□□□□ -0.94
BRCA1-211ENST00000472490 SDIM1Q6ZPB5 146 aa9.17□□□□□ -0.94
BRCA1-211ENST00000472490 Q8N1X5 172 aa9.17□□□□□ -0.94
BRCA1-211ENST00000472490 CHCHD1Q96BP2 118 aaKnown RBP9.17□□□□□ -0.94
BRCA1-211ENST00000472490 CHAC1Q9BUX1 264 aa9.17□□□□□ -0.94
BRCA1-211ENST00000472490 DYNC1H1Q14204 4646 aaKnown RBP9.16□□□□□ -0.94
BRCA1-211ENST00000472490 IGLV4-69A0A075B6H9 119 aa9.16□□□□□ -0.94
BRCA1-211ENST00000472490 A0A087WZ39 114 aa9.16□□□□□ -0.94
BRCA1-211ENST00000472490 F8WDY8 70 aa9.16□□□□□ -0.94
BRCA1-211ENST00000472490 TRGC2P03986 189 aa9.16□□□□□ -0.94
BRCA1-211ENST00000472490 HERVK_113P63121 156 aa9.16□□□□□ -0.94
BRCA1-211ENST00000472490 SYCNQ0VAF6 134 aa9.16□□□□□ -0.94
BRCA1-211ENST00000472490 LINC00173Q6ZV60 143 aa9.16□□□□□ -0.94
BRCA1-211ENST00000472490 FAM19A3Q7Z5A8 133 aa9.16□□□□□ -0.94
BRCA1-211ENST00000472490 LINC01561Q8N1V8 128 aa9.16□□□□□ -0.94
BRCA1-211ENST00000472490 C2orf48Q96LS8 159 aa9.16□□□□□ -0.94
BRCA1-211ENST00000472490 CARD19Q96LW7 228 aa9.16□□□□□ -0.94
BRCA1-211ENST00000472490 GEMIN7Q9H840 131 aaKnown RBP9.16□□□□□ -0.94
BRCA1-211ENST00000472490 SPAG11BQ08648 103 aa9.15□□□□□ -0.94
BRCA1-211ENST00000472490 ORAOV1Q8WV07 137 aa9.15□□□□□ -0.94
BRCA1-211ENST00000472490 URB1-AS1Q96HZ7 61 aa9.15□□□□□ -0.94
BRCA1-211ENST00000472490 CAMK2N2Q96S95 79 aa9.15□□□□□ -0.94
BRCA1-211ENST00000472490 KIAA1109Q2LD37 5005 aa9.14□□□□□ -0.95
BRCA1-211ENST00000472490 LRP1BQ9NZR2 4599 aa9.14□□□□□ -0.95
BRCA1-211ENST00000472490 COLCA2A8K830 154 aa9.14□□□□□ -0.95
BRCA1-211ENST00000472490 ATP5LO75964 103 aa9.14□□□□□ -0.95
BRCA1-211ENST00000472490 COX6A2Q02221 97 aa9.14□□□□□ -0.95
BRCA1-211ENST00000472490 PMVKQ15126 192 aa9.14□□□□□ -0.95
BRCA1-211ENST00000472490 ZC2HC1BQ5TFG8 222 aa9.14□□□□□ -0.95
BRCA1-211ENST00000472490 BAGE3Q86Y29 109 aa9.14□□□□□ -0.95
BRCA1-211ENST00000472490 FAM229AH3BQW9 127 aa9.13□□□□□ -0.95
BRCA1-211ENST00000472490 HAMPP81172 84 aa9.13□□□□□ -0.95
BRCA1-211ENST00000472490 SCXQ7RTU7 201 aa9.13□□□□□ -0.95
BRCA1-211ENST00000472490 LINC00526Q96FQ7 95 aa9.13□□□□□ -0.95
BRCA1-211ENST00000472490 DPH3Q96FX2 82 aa9.13□□□□□ -0.95
BRCA1-211ENST00000472490 PACRGQ96M98 296 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-211ENST00000472490 CST9LQ9H4G1 147 aa9.13□□□□□ -0.95
BRCA1-211ENST00000472490 LINC00474Q9P2X8 69 aa9.13□□□□□ -0.95
BRCA1-211ENST00000472490 TINCRA0A1B0GVN0 87 aa9.12□□□□□ -0.95
BRCA1-211ENST00000472490 EPM2AB3EWF7 344 aa9.12□□□□□ -0.95
BRCA1-211ENST00000472490 HSBP1O75506 76 aa9.12□□□□□ -0.95
BRCA1-211ENST00000472490 CIRBP-AS1Q8TBR5 109 aa9.12□□□□□ -0.95
BRCA1-211ENST00000472490 TMA7Q9Y2S6 64 aaKnown RBP9.12□□□□□ -0.95
BRCA1-211ENST00000472490 DNAH5Q8TE73 4624 aa9.11□□□□□ -0.95
BRCA1-211ENST00000472490 A0A096LNJ9 63 aa9.11□□□□□ -0.95
BRCA1-211ENST00000472490 NDUFA1O15239 70 aa9.11□□□□□ -0.95
BRCA1-211ENST00000472490 PRSS2P07478 247 aa9.11□□□□□ -0.95
BRCA1-211ENST00000472490 PMCHL1Q16048 86 aa9.11□□□□□ -0.95
BRCA1-211ENST00000472490 A0A0J9YXV3 536 aa9.1□□□□□ -0.95
BRCA1-211ENST00000472490 SMR3BP02814 79 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-211ENST00000472490 NDUFA6P56556 154 aa9.1□□□□□ -0.95
BRCA1-211ENST00000472490 CIRBPQ14011 172 aaKnown RBP9.1□□□□□ -0.95
BRCA1-211ENST00000472490 RNF151Q2KHN1 245 aa9.1□□□□□ -0.95
BRCA1-211ENST00000472490 PDZD11Q5EBL8 140 aa9.1□□□□□ -0.95
BRCA1-211ENST00000472490 Q6ZRU5 148 aa9.1□□□□□ -0.95
BRCA1-211ENST00000472490 MRPL35Q9NZE8 188 aaKnown RBP9.1□□□□□ -0.95
BRCA1-211ENST00000472490 LINC00469Q8N7U9 141 aa9.09□□□□□ -0.95
BRCA1-211ENST00000472490 CDKN2A-AS1Q9UH64 79 aa9.09□□□□□ -0.95
BRCA1-211ENST00000472490 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-211ENST00000472490 LOC107984640A0A0U1RRK4 108 aa9.08□□□□□ -0.96
BRCA1-211ENST00000472490 H3BRM9 83 aa9.08□□□□□ -0.96
BRCA1-211ENST00000472490 SCO1O75880 301 aa9.08□□□□□ -0.96
BRCA1-211ENST00000472490 SPACA4Q8TDM5 124 aa9.08□□□□□ -0.96
BRCA1-211ENST00000472490 IGLV5-45A0A087WSX0 123 aa9.07□□□□□ -0.96
BRCA1-211ENST00000472490 IGKV2-24A0A0C4DH68 120 aa9.07□□□□□ -0.96
BRCA1-211ENST00000472490 S100A1P23297 94 aa9.07□□□□□ -0.96
BRCA1-211ENST00000472490 CKS1BP61024 79 aa9.07□□□□□ -0.96
BRCA1-211ENST00000472490 C6orf226Q5I0X4 101 aa9.07□□□□□ -0.96
BRCA1-211ENST00000472490 Q5VSD8 79 aa9.07□□□□□ -0.96
BRCA1-211ENST00000472490 Q8IZM0 81 aa9.07□□□□□ -0.96
BRCA1-211ENST00000472490 PLA2G1BP04054 148 aaKnown RBP9.06□□□□□ -0.96
BRCA1-211ENST00000472490 KIAA0087Q14695 138 aa9.06□□□□□ -0.96
BRCA1-211ENST00000472490 MAJINQ3KP22 176 aa9.06□□□□□ -0.96
BRCA1-211ENST00000472490 XP32Q5T750 250 aa9.06□□□□□ -0.96
BRCA1-211ENST00000472490 IFI27L1Q96BM0 104 aa9.06□□□□□ -0.96
BRCA1-211ENST00000472490 TOMM7Q9P0U1 55 aa9.06□□□□□ -0.96
BRCA1-211ENST00000472490 HERC2O95714 4834 aa9.05□□□□□ -0.96
BRCA1-211ENST00000472490 TRBV30A0A0K0K1B3 111 aa9.05□□□□□ -0.96
BRCA1-211ENST00000472490 PANO1I0J062 215 aa9.05□□□□□ -0.96
BRCA1-211ENST00000472490 SERF1AO75920 110 aa9.05□□□□□ -0.96
BRCA1-211ENST00000472490 CHTF8P0CG12 524 aa9.05□□□□□ -0.96
BRCA1-211ENST00000472490 IGLC3P0DOY3 106 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms