RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 AMTP48728 403 aa8.6□□□□□ -1.03
LTA-215ENST00000471842 SCXQ7RTU7 201 aa8.6□□□□□ -1.03
LTA-215ENST00000471842 PLA2G1BP04054 148 aaKnown RBP8.59□□□□□ -1.03
LTA-215ENST00000471842 REG3AQ06141 175 aa8.59□□□□□ -1.03
LTA-215ENST00000471842 Q6ZSA8 131 aa8.59□□□□□ -1.03
LTA-215ENST00000471842 VCX2Q9H322 139 aa8.59□□□□□ -1.03
LTA-215ENST00000471842 SS18L2Q9UHA2 77 aa8.59□□□□□ -1.03
LTA-215ENST00000471842 RPL32P62910 135 aaKnown RBP8.58□□□□□ -1.04
LTA-215ENST00000471842 RPL24P83731 157 aaKnown RBP8.58□□□□□ -1.04
LTA-215ENST00000471842 SLC25A34Q6PIV7 304 aa8.58□□□□□ -1.04
LTA-215ENST00000471842 IGKV3OR2-268A0A0C4DH90 116 aa8.57□□□□□ -1.04
LTA-215ENST00000471842 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.57□□□□□ -1.04
LTA-215ENST00000471842 C3orf79P0CE67 100 aa8.57□□□□□ -1.04
LTA-215ENST00000471842 PGLYRP4Q96LB8 373 aa8.57□□□□□ -1.04
LTA-215ENST00000471842 PRSS1P07477 247 aa8.57□□□□□ -1.04
LTA-215ENST00000471842 BOD1L2Q8IYS8 172 aa8.57□□□□□ -1.04
LTA-215ENST00000471842 GATD1Q8NB37 220 aa8.57□□□□□ -1.04
LTA-215ENST00000471842 GTSF1Q8WW33 167 aa8.57□□□□□ -1.04
LTA-215ENST00000471842 RPL39LQ96EH5 51 aaKnown RBP8.57□□□□□ -1.04
LTA-215ENST00000471842 MRPL18Q9H0U6 180 aaKnown RBP8.57□□□□□ -1.04
LTA-215ENST00000471842 PRR34Q9NV39 138 aa8.57□□□□□ -1.04
LTA-215ENST00000471842 HSPB8Q9UJY1 196 aa8.57□□□□□ -1.04
LTA-215ENST00000471842 CYSLTR1Q9Y271 337 aa8.57□□□□□ -1.04
LTA-215ENST00000471842 SRRM2Q9UQ35 2752 aaKnown RBP8.56□□□□□ -1.04
LTA-215ENST00000471842 IGLV4-60A0A075B6I1 120 aa8.56□□□□□ -1.04
LTA-215ENST00000471842 A4D1N5 150 aa8.56□□□□□ -1.04
LTA-215ENST00000471842 FOXA3P55318 350 aaPredicted RBP8.56□□□□□ -1.04
LTA-215ENST00000471842 C20orf203Q8NBC4 194 aa8.56□□□□□ -1.04
LTA-215ENST00000471842 CHAC1Q9BUX1 264 aa8.56□□□□□ -1.04
LTA-215ENST00000471842 GNB1LQ9BYB4 327 aa8.56□□□□□ -1.04
LTA-215ENST00000471842 hDV102S1A0JD36 115 aa8.55□□□□□ -1.04
LTA-215ENST00000471842 FAM231BA6NCW3 169 aa8.55□□□□□ -1.04
LTA-215ENST00000471842 J3QL48 77 aa8.55□□□□□ -1.04
LTA-215ENST00000471842 CIRBP-AS1Q8TBR5 109 aa8.55□□□□□ -1.04
LTA-215ENST00000471842 C18orf32Q8TCD1 76 aa8.55□□□□□ -1.04
LTA-215ENST00000471842 GFRA4Q9GZZ7 299 aa8.55□□□□□ -1.04
LTA-215ENST00000471842 A8MWL6 223 aa8.54□□□□□ -1.04
LTA-215ENST00000471842 RNASEKQ6P5S7 137 aaKnown RBP8.54□□□□□ -1.04
LTA-215ENST00000471842 CNFNQ9BYD5 112 aa8.54□□□□□ -1.04
LTA-215ENST00000471842 DNAH8Q96JB1 4490 aa8.54□□□□□ -1.04
LTA-215ENST00000471842 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.53□□□□□ -1.04
LTA-215ENST00000471842 IGKV2-29A2NJV5 120 aaPredicted RBP8.53□□□□□ -1.04
LTA-215ENST00000471842 APCSP02743 223 aa8.53□□□□□ -1.04
LTA-215ENST00000471842 F8W1H4 67 aa8.52□□□□□ -1.05
LTA-215ENST00000471842 KRTAP26-1Q6PEX3 210 aa8.52□□□□□ -1.05
LTA-215ENST00000471842 FAM231DQ6ZW35 169 aa8.52□□□□□ -1.05
LTA-215ENST00000471842 VPS13BQ7Z7G8 4022 aa8.52□□□□□ -1.05
LTA-215ENST00000471842 TRAV8-4A0A0B4J246 113 aa8.51□□□□□ -1.05
LTA-215ENST00000471842 A0A1B0GUV1 79 aa8.51□□□□□ -1.05
LTA-215ENST00000471842 FABP2P12104 132 aa8.51□□□□□ -1.05
LTA-215ENST00000471842 SMIM20Q8N5G0 67 aa8.51□□□□□ -1.05
LTA-215ENST00000471842 AP5S1Q9NUS5 200 aa8.51□□□□□ -1.05
LTA-215ENST00000471842 NAT8BQ9UHF3 227 aa8.51□□□□□ -1.05
LTA-215ENST00000471842 SPCS1Q9Y6A9 102 aa8.51□□□□□ -1.05
LTA-215ENST00000471842 HERC1Q15751 4861 aa8.51□□□□□ -1.05
LTA-215ENST00000471842 MYCBP2O75592 4640 aa8.51□□□□□ -1.05
LTA-215ENST00000471842 SDHAF1A6NFY7 115 aa8.51□□□□□ -1.05
LTA-215ENST00000471842 PMCHP20382 165 aa8.51□□□□□ -1.05
LTA-215ENST00000471842 DGAT2L7PQ6IED9 249 aa8.51□□□□□ -1.05
LTA-215ENST00000471842 ERASQ7Z444 233 aa8.51□□□□□ -1.05
LTA-215ENST00000471842 ANAPC13Q9BS18 74 aa8.51□□□□□ -1.05
LTA-215ENST00000471842 A0A1W2PPM0 123 aa8.5□□□□□ -1.05
LTA-215ENST00000471842 HIGD1CA8MV81 97 aa8.5□□□□□ -1.05
LTA-215ENST00000471842 CT83Q5H943 113 aa8.5□□□□□ -1.05
LTA-215ENST00000471842 DPH3Q96FX2 82 aa8.5□□□□□ -1.05
LTA-215ENST00000471842 DMBT1Q9UGM3 2413 aaPredicted RBP8.49□□□□□ -1.05
LTA-215ENST00000471842 A0A1B0GUT8 65 aa8.49□□□□□ -1.05
LTA-215ENST00000471842 C9orf163Q8N9P6 203 aa8.49□□□□□ -1.05
LTA-215ENST00000471842 TSKUQ8WUA8 353 aa8.49□□□□□ -1.05
LTA-215ENST00000471842 TMEM191AQ9H0A3 160 aa8.49□□□□□ -1.05
LTA-215ENST00000471842 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.48□□□□□ -1.05
LTA-215ENST00000471842 I3L3M4 83 aa8.48□□□□□ -1.05
LTA-215ENST00000471842 GAS8-AS1O95177 125 aa8.48□□□□□ -1.05
LTA-215ENST00000471842 NCR2O95944 276 aa8.48□□□□□ -1.05
LTA-215ENST00000471842 FGF6P10767 208 aa8.48□□□□□ -1.05
LTA-215ENST00000471842 RPL37AP61513 92 aaKnown RBP8.48□□□□□ -1.05
LTA-215ENST00000471842 HIGD2BQ4VC39 106 aa8.48□□□□□ -1.05
LTA-215ENST00000471842 TMEM101Q96IK0 257 aa8.48□□□□□ -1.05
LTA-215ENST00000471842 SPANXB1Q9NS25 103 aaPredicted RBP8.48□□□□□ -1.05
LTA-215ENST00000471842 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.48□□□□□ -1.05
LTA-215ENST00000471842 AMN1Q8IY45 258 aa8.47□□□□□ -1.05
LTA-215ENST00000471842 CHCHD10Q8WYQ3 142 aaPredicted RBP8.47□□□□□ -1.05
LTA-215ENST00000471842 TMEM126AQ9H061 195 aa8.47□□□□□ -1.05
LTA-215ENST00000471842 OSTCQ9NRP0 149 aa8.47□□□□□ -1.05
LTA-215ENST00000471842 FLG2Q5D862 2391 aaPredicted RBP8.46□□□□□ -1.05
LTA-215ENST00000471842 IGHV3-64A0A075B6Q5 118 aa8.46□□□□□ -1.05
LTA-215ENST00000471842 SMKR1H3BMG3 65 aa8.46□□□□□ -1.05
LTA-215ENST00000471842 H3BUT2 72 aa8.46□□□□□ -1.05
LTA-215ENST00000471842 PANO1I0J062 215 aa8.46□□□□□ -1.05
LTA-215ENST00000471842 SPINK8P0C7L1 97 aa8.46□□□□□ -1.05
LTA-215ENST00000471842 SPANXCQ9NY87 97 aa8.46□□□□□ -1.05
LTA-215ENST00000471842 XCL1P47992 114 aa8.45□□□□□ -1.06
LTA-215ENST00000471842 CNBPP62633 177 aaKnown RBP8.45□□□□□ -1.06
LTA-215ENST00000471842 B5MCH6 92 aa8.45□□□□□ -1.06
LTA-215ENST00000471842 H7C423 109 aa8.45□□□□□ -1.06
LTA-215ENST00000471842 TSHBP01222 138 aa8.45□□□□□ -1.06
LTA-215ENST00000471842 CHTF8P0CG12 524 aa8.45□□□□□ -1.06
LTA-215ENST00000471842 COX8AP10176 69 aa8.45□□□□□ -1.06
LTA-215ENST00000471842 FCER1GP30273 86 aa8.45□□□□□ -1.06
LTA-215ENST00000471842 RIGQ13278 110 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms