RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 KRTAP10-1P60331 282 aa9.85□□□□□ -0.83
SNX13-205ENST00000471744 CNBPP62633 177 aaKnown RBP9.85□□□□□ -0.83
SNX13-205ENST00000471744 SEC11AP67812 179 aa9.85□□□□□ -0.83
SNX13-205ENST00000471744 CHCHD1Q96BP2 118 aaKnown RBP9.85□□□□□ -0.83
SNX13-205ENST00000471744 DYNC1H1Q14204 4646 aaKnown RBP9.85□□□□□ -0.83
SNX13-205ENST00000471744 HBDP02042 147 aa9.84□□□□□ -0.83
SNX13-205ENST00000471744 S100A1P23297 94 aa9.84□□□□□ -0.83
SNX13-205ENST00000471744 UBE2D1P51668 147 aa9.84□□□□□ -0.83
SNX13-205ENST00000471744 URB1-AS1Q96HZ7 61 aa9.84□□□□□ -0.83
SNX13-205ENST00000471744 IGHV3OR16-9A0A0B4J2B5 98 aa9.83□□□□□ -0.84
SNX13-205ENST00000471744 LINC00173Q6ZV60 143 aa9.83□□□□□ -0.84
SNX13-205ENST00000471744 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.82□□□□□ -0.84
SNX13-205ENST00000471744 ZNF561-AS1K7EIQ3 104 aa9.82□□□□□ -0.84
SNX13-205ENST00000471744 SCO1O75880 301 aa9.82□□□□□ -0.84
SNX13-205ENST00000471744 HIGD2BQ4VC39 106 aa9.82□□□□□ -0.84
SNX13-205ENST00000471744 LINC00242Q5T6M2 205 aa9.82□□□□□ -0.84
SNX13-205ENST00000471744 FAM19A3Q7Z5A8 133 aa9.82□□□□□ -0.84
SNX13-205ENST00000471744 C5orf38Q86SI9 138 aa9.82□□□□□ -0.84
SNX13-205ENST00000471744 BAGE3Q86Y29 109 aa9.82□□□□□ -0.84
SNX13-205ENST00000471744 C9orf163Q8N9P6 203 aa9.82□□□□□ -0.84
SNX13-205ENST00000471744 DNAH5Q8TE73 4624 aa9.81□□□□□ -0.84
SNX13-205ENST00000471744 A0A087WZ39 114 aa9.8□□□□□ -0.84
SNX13-205ENST00000471744 A0A096LNJ9 63 aa9.8□□□□□ -0.84
SNX13-205ENST00000471744 ATP5LO75964 103 aa9.8□□□□□ -0.84
SNX13-205ENST00000471744 HERVK_113P63121 156 aa9.8□□□□□ -0.84
SNX13-205ENST00000471744 LINC01561Q8N1V8 128 aa9.8□□□□□ -0.84
SNX13-205ENST00000471744 OR10D4PQ8NGN7 298 aa9.8□□□□□ -0.84
SNX13-205ENST00000471744 LRP1BQ9NZR2 4599 aa9.79□□□□□ -0.84
SNX13-205ENST00000471744 HERC2O95714 4834 aa9.79□□□□□ -0.84
SNX13-205ENST00000471744 HSBP1O75506 76 aa9.79□□□□□ -0.84
SNX13-205ENST00000471744 PMVKQ15126 192 aa9.79□□□□□ -0.84
SNX13-205ENST00000471744 ZC2HC1BQ5TFG8 222 aa9.79□□□□□ -0.84
SNX13-205ENST00000471744 GEMIN7Q9H840 131 aaKnown RBP9.79□□□□□ -0.84
SNX13-205ENST00000471744 PKIGQ9Y2B9 76 aa9.79□□□□□ -0.84
SNX13-205ENST00000471744 IGHV3-64A0A075B6Q5 118 aa9.78□□□□□ -0.84
SNX13-205ENST00000471744 F8WDY8 70 aa9.78□□□□□ -0.84
SNX13-205ENST00000471744 PMCHL1Q16048 86 aa9.78□□□□□ -0.84
SNX13-205ENST00000471744 PDZD11Q5EBL8 140 aa9.78□□□□□ -0.84
SNX13-205ENST00000471744 Q6ZSA8 131 aa9.78□□□□□ -0.84
SNX13-205ENST00000471744 CST9LQ9H4G1 147 aa9.78□□□□□ -0.84
SNX13-205ENST00000471744 ATP6V1G1O75348 118 aa9.77□□□□□ -0.85
SNX13-205ENST00000471744 SLPIP03973 132 aa9.77□□□□□ -0.85
SNX13-205ENST00000471744 COX6A2Q02221 97 aa9.77□□□□□ -0.85
SNX13-205ENST00000471744 SPAG11BQ08648 103 aa9.77□□□□□ -0.85
SNX13-205ENST00000471744 LINC01620Q4KN68 170 aa9.77□□□□□ -0.85
SNX13-205ENST00000471744 ORAOV1Q8WV07 137 aa9.77□□□□□ -0.85
SNX13-205ENST00000471744 C2orf48Q96LS8 159 aa9.77□□□□□ -0.85
SNX13-205ENST00000471744 TINCRA0A1B0GVN0 87 aa9.76□□□□□ -0.85
SNX13-205ENST00000471744 SYCNQ0VAF6 134 aa9.76□□□□□ -0.85
SNX13-205ENST00000471744 CARD19Q96LW7 228 aa9.76□□□□□ -0.85
SNX13-205ENST00000471744 IGLV4-69A0A075B6H9 119 aa9.75□□□□□ -0.85
SNX13-205ENST00000471744 A0A0J9YXV3 536 aa9.75□□□□□ -0.85
SNX13-205ENST00000471744 SERF1AO75920 110 aa9.74□□□□□ -0.85
SNX13-205ENST00000471744 XGP55808 180 aa9.74□□□□□ -0.85
SNX13-205ENST00000471744 SDIM1Q6ZPB5 146 aa9.74□□□□□ -0.85
SNX13-205ENST00000471744 PACRGQ96M98 296 aaPredicted RBP9.74□□□□□ -0.85
SNX13-205ENST00000471744 CAMK2N2Q96S95 79 aa9.74□□□□□ -0.85
SNX13-205ENST00000471744 FAM30AQ9NZY2 134 aa9.74□□□□□ -0.85
SNX13-205ENST00000471744 NDUFA6P56556 154 aa9.73□□□□□ -0.85
SNX13-205ENST00000471744 LINC00469Q8N7U9 141 aa9.73□□□□□ -0.85
SNX13-205ENST00000471744 LINC00526Q96FQ7 95 aa9.73□□□□□ -0.85
SNX13-205ENST00000471744 KIAA1109Q2LD37 5005 aa9.72□□□□□ -0.85
SNX13-205ENST00000471744 IGLV5-45A0A087WSX0 123 aa9.72□□□□□ -0.85
SNX13-205ENST00000471744 NDUFA1O15239 70 aa9.72□□□□□ -0.85
SNX13-205ENST00000471744 IFI27L1Q96BM0 104 aa9.72□□□□□ -0.85
SNX13-205ENST00000471744 CDKN2A-AS1Q9UH64 79 aa9.72□□□□□ -0.85
SNX13-205ENST00000471744 HIST1H2BKO60814 126 aa9.71□□□□□ -0.86
SNX13-205ENST00000471744 HIST1H2BJP06899 126 aa9.71□□□□□ -0.86
SNX13-205ENST00000471744 PRSS2P07478 247 aa9.71□□□□□ -0.86
SNX13-205ENST00000471744 IGLC3P0DOY3 106 aa9.71□□□□□ -0.86
SNX13-205ENST00000471744 HIST1H2BOP23527 126 aa9.71□□□□□ -0.86
SNX13-205ENST00000471744 HIST1H2BBP33778 126 aa9.71□□□□□ -0.86
SNX13-205ENST00000471744 HIST1H2BDP58876 126 aa9.71□□□□□ -0.86
SNX13-205ENST00000471744 HIST1H2BCP62807 126 aa9.71□□□□□ -0.86
SNX13-205ENST00000471744 HIST2H2BEQ16778 126 aa9.71□□□□□ -0.86
SNX13-205ENST00000471744 RNF151Q2KHN1 245 aa9.71□□□□□ -0.86
SNX13-205ENST00000471744 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.71□□□□□ -0.86
SNX13-205ENST00000471744 FAM19A2Q8N3H0 131 aa9.71□□□□□ -0.86
SNX13-205ENST00000471744 HIST1H2BHQ93079 126 aa9.71□□□□□ -0.86
SNX13-205ENST00000471744 HIST1H2BNQ99877 126 aa9.71□□□□□ -0.86
SNX13-205ENST00000471744 HIST1H2BMQ99879 126 aa9.71□□□□□ -0.86
SNX13-205ENST00000471744 CHAC1Q9BUX1 264 aa9.71□□□□□ -0.86
SNX13-205ENST00000471744 TRAV12-1A0A0B4J245 112 aa9.7□□□□□ -0.86
SNX13-205ENST00000471744 H3BRM9 83 aa9.7□□□□□ -0.86
SNX13-205ENST00000471744 LEPROTL1O95214 131 aa9.7□□□□□ -0.86
SNX13-205ENST00000471744 LINC00310P59036 64 aa9.7□□□□□ -0.86
SNX13-205ENST00000471744 Q6ZRU5 148 aa9.7□□□□□ -0.86
SNX13-205ENST00000471744 MRPL35Q9NZE8 188 aaKnown RBP9.7□□□□□ -0.86
SNX13-205ENST00000471744 CIRBPQ14011 172 aaKnown RBP9.69□□□□□ -0.86
SNX13-205ENST00000471744 KIAA0087Q14695 138 aa9.69□□□□□ -0.86
SNX13-205ENST00000471744 Q8IZM0 81 aa9.69□□□□□ -0.86
SNX13-205ENST00000471744 LINC00474Q9P2X8 69 aa9.69□□□□□ -0.86
SNX13-205ENST00000471744 HSPB8Q9UJY1 196 aa9.69□□□□□ -0.86
SNX13-205ENST00000471744 LOC107984640A0A0U1RRK4 108 aa9.68□□□□□ -0.86
SNX13-205ENST00000471744 SCXQ7RTU7 201 aa9.68□□□□□ -0.86
SNX13-205ENST00000471744 Q8N1X5 172 aa9.68□□□□□ -0.86
SNX13-205ENST00000471744 KRTAP17-1Q9BYP8 105 aa9.68□□□□□ -0.86
SNX13-205ENST00000471744 CHTOPQ9Y3Y2 248 aaKnown RBP9.68□□□□□ -0.86
SNX13-205ENST00000471744 APOBP04114 4563 aaKnown RBP9.67□□□□□ -0.86
SNX13-205ENST00000471744 RYR1P21817 5038 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 205.6 ms