RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 C3orf79P0CE67 100 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 CD79AP11912 226 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 HLA-DRB4P13762 266 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 PPIBP23284 216 aaKnown RBP-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 AP2S1P53680 142 aaPredicted RBP-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 DNAJB13P59910 316 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 SNRPD3P62318 126 aaKnown RBP-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 PSPHP78330 225 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 HIST3H3Q16695 136 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 UNQ5815/PRO19632Q6UWF5 114 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 Q6ZQY7 126 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 Q6ZRX8 168 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 KRT222Q8N1A0 295 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 C12orf45Q8N5I9 185 aaPredicted RBP-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 CLDN22Q8N7P3 220 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 TMEM263Q8WUH6 116 aaKnown RBP-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 ZHX1-C8orf76Q96EF9 292 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 CCDC32Q9BV29 185 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 GGACTQ9BVM4 153 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 CNFNQ9BYD5 112 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 TMEM133Q9H2Q1 129 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 SMPXQ9UHP9 88 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 ATPIF1Q9UII2 106 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 HLA-DRB4X5D2U9 266 aa-0.35□□□□□ -2.47
UBXN4-207ENST00000471246 TRBV7-1A0A0A6YYK4 115 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 MMP24-AS1A0A0U1RRL7 71 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 A8MWV9 139 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 TMEM262E9PQX1 116 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 I3L2K1 104 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 GPR31O00270 319 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 CYB5BO43169 146 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 TTRP02766 147 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 C8GP07360 202 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 SMIM17P0DL12 118 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 CXCL8P10145 99 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 HIST1H1EP10412 219 aaKnown RBP-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 IFITM1P13164 125 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 AP3S2P59780 193 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 BTG2P78543 158 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 OR2F1Q13607 317 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 SPINK13Q1W4C9 94 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 C5orf38Q86SI9 138 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 OR5D14Q8NGL3 314 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 TMEM167AQ8TBQ9 72 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 NEK7Q8TDX7 302 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 FAM172AQ8WUF8 416 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 PTH2Q96A98 100 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 DCUN1D1Q96GG9 259 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 AMELXQ99217 191 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 LINC00470Q9BZP3 86 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 OR2J1Q9GZK6 312 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 TMEM126AQ9H061 195 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 NDUFAF1Q9Y375 327 aa-0.36□□□□□ -2.47
UBXN4-207ENST00000471246 TRGV1A0A0A0MS02 117 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 hADV38S2A0JD32 116 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 TMEM30CPA0ZSE6 113 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 C9orf170A2RU37 121 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 TMEM238C9JI98 176 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 FXYD1O00168 92 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 AIPO00170 330 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 E2F6O75461 281 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 TCRAP04437 139 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 PRM1P04553 51 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 CALB1P05937 261 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 RPS17P08708 135 aaKnown RBP-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 MPC1LP0DKB6 136 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 CMPK1P30085 196 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 AKR1D1P51857 326 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 PIGPP57054 158 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 PCBD1P61457 104 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 CDK6Q00534 326 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 ITGB3BPQ13352 177 aaPredicted RBP-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 OCIAD2Q56VL3 154 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 PSMG4Q5JS54 123 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 HEPN1Q6WQI6 88 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 TRAPPC5Q8IUR0 188 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 FAM216BQ8N7L0 139 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 OR5A2Q8NGI9 324 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 OR10X1Q8NGY0 326 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 OR10AG1Q8NH19 301 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 STAG3L4Q8TBR4 150 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 TEX37Q96LM6 180 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 ZNF714Q96N38 554 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 SIGMAR1Q99720 223 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 MRPS26Q9BYN8 205 aaKnown RBP-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 TP53AIP1Q9HCN2 124 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 C19orf12Q9NSK7 152 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 MED11Q9P086 117 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 RABAC1Q9UI14 185 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 OR52A1Q9UKL2 312 aa-0.37□□□□□ -2.47
UBXN4-207ENST00000471246 TRGV10A0A0A0MS01 117 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 LOC100130705A0A1B0GUX0 176 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 CLDN24A6NM45 220 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 ZNF815PA8K554 130 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 NDUFC1O43677 76 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 CHP2O43745 196 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 NDUFA3O95167 84 aa-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 CFDP00746 253 aaPredicted RBP-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 HIST1H1BP16401 226 aaKnown RBP-0.38□□□□□ -2.47
UBXN4-207ENST00000471246 NCALDP61601 193 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 240.3 ms