RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 TRGV4A0A0C4DH28 118 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 FAM24AA6NFZ4 105 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 GNRH2O43555 120 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 CST7O76096 145 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 IGHV3-30P01768 117 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 IGHV3-33P01772 117 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 NMBP08949 121 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 IGHV3-30-3P0DP02 117 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 IGHV3-30-5P0DP03 117 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 TAS2R30P59541 319 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 IAH1Q2TAA2 248 aaPredicted RBP2.97□□□□□ -1.93
CKS1B-204ENST00000471245 DPPA3Q6W0C5 159 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 S100A7AQ86SG5 101 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 MCFD2Q8NI22 146 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 SLC25A21Q9BQT8 299 aaPredicted RBP2.97□□□□□ -1.93
CKS1B-204ENST00000471245 TXNDC17Q9BRA2 123 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 GGACTQ9BVM4 153 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 SLC39A9Q9NUM3 307 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 TMEM14CQ9P0S9 112 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 PHLDA3Q9Y5J5 127 aa2.97□□□□□ -1.93
CKS1B-204ENST00000471245 TRAV4A0A0B4J268 109 aa2.96□□□□□ -1.94
CKS1B-204ENST00000471245 IGSF23A1L1A6 192 aa2.96□□□□□ -1.94
CKS1B-204ENST00000471245 NDUFB6O95139 128 aa2.96□□□□□ -1.94
CKS1B-204ENST00000471245 PDE6HQ13956 83 aa2.96□□□□□ -1.94
CKS1B-204ENST00000471245 ZNF846Q147U1 533 aa2.96□□□□□ -1.94
CKS1B-204ENST00000471245 PYDC2Q56P42 97 aa2.96□□□□□ -1.94
CKS1B-204ENST00000471245 Q6AWC8 147 aa2.96□□□□□ -1.94
CKS1B-204ENST00000471245 MIR17HGQ75NE6 70 aa2.96□□□□□ -1.94
CKS1B-204ENST00000471245 TOMM5Q8N4H5 51 aa2.96□□□□□ -1.94
CKS1B-204ENST00000471245 TVP23CQ96ET8 276 aa2.96□□□□□ -1.94
CKS1B-204ENST00000471245 GSKIPQ9P0R6 139 aa2.96□□□□□ -1.94
CKS1B-204ENST00000471245 FSIP2Q5CZC0 6907 aa2.96□□□□□ -1.94
CKS1B-204ENST00000471245 PIGBOS1A0A0B4J2F0 54 aa2.95□□□□□ -1.94
CKS1B-204ENST00000471245 UBE2L5PA0A1B0GUS4 154 aa2.95□□□□□ -1.94
CKS1B-204ENST00000471245 C9JCJ5 164 aa2.95□□□□□ -1.94
CKS1B-204ENST00000471245 INMT-MINDY4F8WBC2 141 aa2.95□□□□□ -1.94
CKS1B-204ENST00000471245 NBEAP1P0C6P0 100 aa2.95□□□□□ -1.94
CKS1B-204ENST00000471245 LINC00694P0DN24 101 aa2.95□□□□□ -1.94
CKS1B-204ENST00000471245 FGF6P10767 208 aa2.95□□□□□ -1.94
CKS1B-204ENST00000471245 ESDP10768 282 aa2.95□□□□□ -1.94
CKS1B-204ENST00000471245 G0S2P27469 103 aa2.95□□□□□ -1.94
CKS1B-204ENST00000471245 FAUP35544 74 aaKnown RBP2.95□□□□□ -1.94
CKS1B-204ENST00000471245 IL15RAQ13261 267 aa2.95□□□□□ -1.94
CKS1B-204ENST00000471245 TMEM78Q5T7P6 136 aa2.95□□□□□ -1.94
CKS1B-204ENST00000471245 BORCS7Q96B45 105 aa2.95□□□□□ -1.94
CKS1B-204ENST00000471245 LINC01600Q96MT4 127 aa2.95□□□□□ -1.94
CKS1B-204ENST00000471245 NKX6-2Q9C056 277 aaPredicted RBP2.95□□□□□ -1.94
CKS1B-204ENST00000471245 UQCC1Q9NVA1 299 aa2.95□□□□□ -1.94
CKS1B-204ENST00000471245 TIMM9Q9Y5J7 89 aa2.95□□□□□ -1.94
CKS1B-204ENST00000471245 TRAPPC1Q9Y5R8 145 aa2.95□□□□□ -1.94
CKS1B-204ENST00000471245 IGHV3-73A0A0B4J1V6 119 aa2.94□□□□□ -1.94
CKS1B-204ENST00000471245 LINC00862A6NCI5 91 aa2.94□□□□□ -1.94
CKS1B-204ENST00000471245 M0R2P5 195 aa2.94□□□□□ -1.94
CKS1B-204ENST00000471245 OR10J4P0C629 311 aa2.94□□□□□ -1.94
CKS1B-204ENST00000471245 FGF7P21781 194 aa2.94□□□□□ -1.94
CKS1B-204ENST00000471245 TMBIM6P55061 237 aa2.94□□□□□ -1.94
CKS1B-204ENST00000471245 C10orf91Q5T1B1 145 aa2.94□□□□□ -1.94
CKS1B-204ENST00000471245 CFAP126Q5VTH2 177 aa2.94□□□□□ -1.94
CKS1B-204ENST00000471245 OR2D3Q8NGH3 330 aa2.94□□□□□ -1.94
CKS1B-204ENST00000471245 UBE2WQ96B02 151 aa2.94□□□□□ -1.94
CKS1B-204ENST00000471245 BTF3L4Q96K17 158 aa2.94□□□□□ -1.94
CKS1B-204ENST00000471245 PFDN5Q99471 154 aa2.94□□□□□ -1.94
CKS1B-204ENST00000471245 SIGMAR1Q99720 223 aa2.94□□□□□ -1.94
CKS1B-204ENST00000471245 DPH3P1Q9H4G8 78 aa2.94□□□□□ -1.94
CKS1B-204ENST00000471245 KCNIP2Q9NS61 270 aa2.94□□□□□ -1.94
CKS1B-204ENST00000471245 TRBV24-1A0A075B6N3 115 aa2.93□□□□□ -1.94
CKS1B-204ENST00000471245 A0A0D9SG52 128 aa2.93□□□□□ -1.94
CKS1B-204ENST00000471245 RBAKDNA6NC62 111 aa2.93□□□□□ -1.94
CKS1B-204ENST00000471245 F6UZH7 168 aa2.93□□□□□ -1.94
CKS1B-204ENST00000471245 PLA2G10O15496 165 aa2.93□□□□□ -1.94
CKS1B-204ENST00000471245 SH2D1AO60880 128 aa2.93□□□□□ -1.94
CKS1B-204ENST00000471245 ZNF80P51504 273 aaPredicted RBP2.93□□□□□ -1.94
CKS1B-204ENST00000471245 C12orf45Q8N5I9 185 aaPredicted RBP2.93□□□□□ -1.94
CKS1B-204ENST00000471245 ATP6V0E2Q8NHE4 81 aa2.93□□□□□ -1.94
CKS1B-204ENST00000471245 SFRP2Q96HF1 295 aa2.93□□□□□ -1.94
CKS1B-204ENST00000471245 NPCDR1Q9BY65 106 aa2.93□□□□□ -1.94
CKS1B-204ENST00000471245 LYRM2Q9NU23 88 aaPredicted RBP2.93□□□□□ -1.94
CKS1B-204ENST00000471245 TRBV6-4A0A1B0GX49 114 aa2.92□□□□□ -1.94
CKS1B-204ENST00000471245 H3BQ85 93 aa2.92□□□□□ -1.94
CKS1B-204ENST00000471245 S100A11P31949 105 aa2.92□□□□□ -1.94
CKS1B-204ENST00000471245 RPL19P84098 196 aaKnown RBP2.92□□□□□ -1.94
CKS1B-204ENST00000471245 C2orf50Q96LR7 162 aa2.92□□□□□ -1.94
CKS1B-204ENST00000471245 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
CKS1B-204ENST00000471245 LENEPQ9Y5L5 61 aa2.92□□□□□ -1.94
CKS1B-204ENST00000471245 NAP1L6A6NFF2 107 aa2.91□□□□□ -1.94
CKS1B-204ENST00000471245 GGTLC3B5MD39 225 aa2.91□□□□□ -1.94
CKS1B-204ENST00000471245 RNASE3P12724 160 aaKnown RBP2.91□□□□□ -1.94
CKS1B-204ENST00000471245 GNG5P63218 68 aa2.91□□□□□ -1.94
CKS1B-204ENST00000471245 FABP9Q0Z7S8 132 aa2.91□□□□□ -1.94
CKS1B-204ENST00000471245 RHOHQ15669 191 aa2.91□□□□□ -1.94
CKS1B-204ENST00000471245 MRPL51Q4U2R6 128 aaKnown RBP2.91□□□□□ -1.94
CKS1B-204ENST00000471245 GOLT1AQ6ZVE7 132 aa2.91□□□□□ -1.94
CKS1B-204ENST00000471245 HYLS1Q96M11 299 aa2.91□□□□□ -1.94
CKS1B-204ENST00000471245 OR5AC2Q9NZP5 309 aa2.91□□□□□ -1.94
CKS1B-204ENST00000471245 PKIGQ9Y2B9 76 aa2.91□□□□□ -1.94
CKS1B-204ENST00000471245 TRAV21A0A0B4J279 112 aa2.9□□□□□ -1.95
CKS1B-204ENST00000471245 A0A1B0GW54 56 aa2.9□□□□□ -1.95
CKS1B-204ENST00000471245 SIX6O95475 246 aa2.9□□□□□ -1.95
CKS1B-204ENST00000471245 IL7P13232 177 aa2.9□□□□□ -1.95
CKS1B-204ENST00000471245 ATP6V0CP27449 155 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms