RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 BLCAPP62952 87 aa3.05□□□□□ -1.92
VPS50-210ENST00000471188 COX6A2Q02221 97 aa3.05□□□□□ -1.92
VPS50-210ENST00000471188 SPINK13Q1W4C9 94 aa3.05□□□□□ -1.92
VPS50-210ENST00000471188 LINC00337Q8N6G1 96 aa3.05□□□□□ -1.92
VPS50-210ENST00000471188 LINC00467Q9BRT7 94 aa3.05□□□□□ -1.92
VPS50-210ENST00000471188 ORMDL1Q9P0S3 153 aa3.05□□□□□ -1.92
VPS50-210ENST00000471188 IGHV3-16A0A0C4DH30 117 aa3.05□□□□□ -1.92
VPS50-210ENST00000471188 IGKV3OR2-268A0A0C4DH90 116 aa3.05□□□□□ -1.92
VPS50-210ENST00000471188 A0A1W2PNU3 283 aaPredicted RBP3.05□□□□□ -1.92
VPS50-210ENST00000471188 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.05□□□□□ -1.92
VPS50-210ENST00000471188 Q8N9W7 124 aa3.05□□□□□ -1.92
VPS50-210ENST00000471188 Q9UF83 564 aa3.05□□□□□ -1.92
VPS50-210ENST00000471188 MOB4Q9Y3A3 225 aa3.05□□□□□ -1.92
VPS50-210ENST00000471188 PIEZO2Q9H5I5 2752 aa3.05□□□□□ -1.92
VPS50-210ENST00000471188 LRBAP50851 2863 aa3.05□□□□□ -1.92
VPS50-210ENST00000471188 H0YGX0 51 aa3.04□□□□□ -1.92
VPS50-210ENST00000471188 PMAIP1Q13794 54 aa3.04□□□□□ -1.92
VPS50-210ENST00000471188 ATP5EP2Q5VTU8 51 aa3.04□□□□□ -1.92
VPS50-210ENST00000471188 RHPN1-AS1Q9BWJ2 59 aa3.04□□□□□ -1.92
VPS50-210ENST00000471188 FAM215AQ9Y5M1 114 aa3.04□□□□□ -1.92
VPS50-210ENST00000471188 C19orf54Q5BKX5 351 aa3.04□□□□□ -1.92
VPS50-210ENST00000471188 MINOS1Q5TGZ0 78 aa3.04□□□□□ -1.92
VPS50-210ENST00000471188 ASH1LQ9NR48 2969 aaKnown RBP3.04□□□□□ -1.92
VPS50-210ENST00000471188 KLLNB2CW77 178 aa3.04□□□□□ -1.92
VPS50-210ENST00000471188 DEFB109BQ30KR1 87 aa3.04□□□□□ -1.92
VPS50-210ENST00000471188 FAM104AQ969W3 186 aa3.04□□□□□ -1.92
VPS50-210ENST00000471188 EP300Q09472 2414 aaPredicted RBP3.03□□□□□ -1.92
VPS50-210ENST00000471188 ANKHD1Q8IWZ3 2542 aaKnown RBP3.03□□□□□ -1.92
VPS50-210ENST00000471188 TRAV10A0A0B4J240 114 aa3.03□□□□□ -1.92
VPS50-210ENST00000471188 E7EQL1 145 aa3.03□□□□□ -1.92
VPS50-210ENST00000471188 Q6ZTI0 123 aa3.03□□□□□ -1.92
VPS50-210ENST00000471188 C11orf68Q9H3H3 251 aaKnown RBP3.03□□□□□ -1.92
VPS50-210ENST00000471188 CUL9Q8IWT3 2517 aa3.03□□□□□ -1.92
VPS50-210ENST00000471188 A0A087WZ39 114 aa3.03□□□□□ -1.92
VPS50-210ENST00000471188 SMIM1B2RUZ4 78 aa3.03□□□□□ -1.92
VPS50-210ENST00000471188 EPM2AB3EWF7 344 aa3.03□□□□□ -1.92
VPS50-210ENST00000471188 KLKP1Q107X0 134 aa3.03□□□□□ -1.92
VPS50-210ENST00000471188 LRCOL1A6NCL2 159 aa3.02□□□□□ -1.93
VPS50-210ENST00000471188 JMJD7-PLA2G4BH0Y9G9 81 aa3.02□□□□□ -1.93
VPS50-210ENST00000471188 PRM2P04554 102 aa3.02□□□□□ -1.93
VPS50-210ENST00000471188 LINC00242Q5T6M2 205 aa3.02□□□□□ -1.93
VPS50-210ENST00000471188 SCXQ7RTU7 201 aa3.02□□□□□ -1.93
VPS50-210ENST00000471188 C11orf72Q8NBR9 251 aa3.02□□□□□ -1.93
VPS50-210ENST00000471188 CHCHD7Q9BUK0 85 aa3.02□□□□□ -1.93
VPS50-210ENST00000471188 IGKV2-28A0A075B6P5 120 aa3.02□□□□□ -1.93
VPS50-210ENST00000471188 IGHV3OR16-12A0A075B7B8 117 aa3.02□□□□□ -1.93
VPS50-210ENST00000471188 IGKV2D-28P01615 120 aa3.02□□□□□ -1.93
VPS50-210ENST00000471188 MIFP14174 115 aa3.02□□□□□ -1.93
VPS50-210ENST00000471188 FAM229BQ4G0N7 80 aa3.02□□□□□ -1.93
VPS50-210ENST00000471188 APRG1Q8IVJ8 170 aa3.02□□□□□ -1.93
VPS50-210ENST00000471188 LAMTOR3Q9UHA4 124 aa3.02□□□□□ -1.93
VPS50-210ENST00000471188 DAD1P61803 113 aa3.02□□□□□ -1.93
VPS50-210ENST00000471188 IGLV5-39A0A0G2JS06 123 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 NDUFA4O00483 81 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 NDUFC1O43677 76 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 Q8N6K4 173 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 OBSCN-AS1Q96MR7 158 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 TM2D3Q9BRN9 247 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 WNK1Q9H4A3 2382 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 ODF3BA8MYP8 253 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 CCL18P55774 89 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 C6orf226Q5I0X4 101 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 AKAP13Q12802 2813 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 SPG11Q96JI7 2443 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 TRBV10-3A0A0K0K1G6 114 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.01□□□□□ -1.93
VPS50-210ENST00000471188 TMEM256-PLSCR3K7ERE1 68 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 SAA4P35542 130 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 ATP5EP56381 51 aaPredicted RBP3.01□□□□□ -1.93
VPS50-210ENST00000471188 Q6ZSN1 163 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 ARRDC1-AS1Q9H2J1 176 aa3.01□□□□□ -1.93
VPS50-210ENST00000471188 TRIOBPQ9H2D6 2365 aa3□□□□□ -1.93
VPS50-210ENST00000471188 CUBNO60494 3623 aa3□□□□□ -1.93
VPS50-210ENST00000471188 COL12A1Q99715 3063 aa3□□□□□ -1.93
VPS50-210ENST00000471188 IGLV5-45A0A087WSX0 123 aa3□□□□□ -1.93
VPS50-210ENST00000471188 LINC01547P58512 204 aaPredicted RBP3□□□□□ -1.93
VPS50-210ENST00000471188 ESRGQ1W209 222 aa3□□□□□ -1.93
VPS50-210ENST00000471188 COX7B2Q8TF08 81 aa3□□□□□ -1.93
VPS50-210ENST00000471188 MINOS1-NBL1R4GNA1 71 aa3□□□□□ -1.93
VPS50-210ENST00000471188 RIF1Q5UIP0 2472 aaKnown RBP3□□□□□ -1.93
VPS50-210ENST00000471188 DCHS2Q6V1P9 2916 aa3□□□□□ -1.93
VPS50-210ENST00000471188 UBE2L6O14933 153 aa3□□□□□ -1.93
VPS50-210ENST00000471188 FUSP35637 526 aaKnown RBP eCLIP3□□□□□ -1.93
VPS50-210ENST00000471188 TMEM254Q8TBM7 123 aa3□□□□□ -1.93
VPS50-210ENST00000471188 PRB2P02812 416 aaPredicted RBP2.99□□□□□ -1.93
VPS50-210ENST00000471188 LY6EQ16553 131 aa2.99□□□□□ -1.93
VPS50-210ENST00000471188 NREPQ16612 68 aa2.99□□□□□ -1.93
VPS50-210ENST00000471188 LINC01560Q8TB33 94 aa2.99□□□□□ -1.93
VPS50-210ENST00000471188 Q96MF0 132 aa2.99□□□□□ -1.93
VPS50-210ENST00000471188 CSPG4Q6UVK1 2322 aa2.99□□□□□ -1.93
VPS50-210ENST00000471188 TRBV10-1A0A0K0K1A3 114 aa2.99□□□□□ -1.93
VPS50-210ENST00000471188 PSPHP1O15172 72 aa2.99□□□□□ -1.93
VPS50-210ENST00000471188 Q6ZVQ6 151 aa2.99□□□□□ -1.93
VPS50-210ENST00000471188 MRPL55Q7Z7F7 128 aaKnown RBP2.99□□□□□ -1.93
VPS50-210ENST00000471188 PLAC8L1A1L4L8 177 aa2.99□□□□□ -1.93
VPS50-210ENST00000471188 IGHV3-53P01767 116 aa2.99□□□□□ -1.93
VPS50-210ENST00000471188 LCE5AQ5TCM9 118 aa2.99□□□□□ -1.93
VPS50-210ENST00000471188 C19orf84I3L1E1 186 aa2.98□□□□□ -1.93
VPS50-210ENST00000471188 PRR3P79522 188 aaKnown RBP2.98□□□□□ -1.93
VPS50-210ENST00000471188 CFHR3Q02985 330 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms