RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 A0A0U1RRA0 63 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 HBDP02042 147 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 Q8N8P6 123 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 DNAJC30Q96LL9 226 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 C20orf78Q9BR46 151 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 SMIM2Q9BVW6 85 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 MAP1LC3CQ9BXW4 147 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 ST20Q9HBF5 79 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 APLNQ9ULZ1 77 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 TRAV9-2A0A087WT02 112 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 NUPR2A6NF83 97 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 TSHBP01222 138 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 PRSS2P07478 247 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 GAGE2BQ13066 116 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 MRPL23Q16540 153 aaKnown RBP3.24□□□□□ -1.89
SF3B1-208ENST00000470268 ESRGQ1W209 222 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 GAGE2EQ4V326 116 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 LINC01545Q5VT33 79 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 GAGE2AQ6NT46 116 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 ATP6V0E2Q8NHE4 81 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 IFI27L1Q96BM0 104 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 GAGE2DQ9UEU5 116 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 ICOSQ9Y6W8 199 aa3.24□□□□□ -1.89
SF3B1-208ENST00000470268 LINC01546A6NGU7 62 aa3.23□□□□□ -1.89
SF3B1-208ENST00000470268 I3L3M4 83 aa3.23□□□□□ -1.89
SF3B1-208ENST00000470268 PPP1R17O96001 155 aa3.23□□□□□ -1.89
SF3B1-208ENST00000470268 IGKV2-30P06310 120 aa3.23□□□□□ -1.89
SF3B1-208ENST00000470268 FCER1GP30273 86 aa3.23□□□□□ -1.89
SF3B1-208ENST00000470268 RPL39P62891 51 aaKnown RBP3.23□□□□□ -1.89
SF3B1-208ENST00000470268 RPL32P62910 135 aaKnown RBP3.23□□□□□ -1.89
SF3B1-208ENST00000470268 LAGE3Q14657 143 aa3.23□□□□□ -1.89
SF3B1-208ENST00000470268 CASC10Q5T4H9 136 aa3.23□□□□□ -1.89
SF3B1-208ENST00000470268 LYPD5Q6UWN5 251 aa3.23□□□□□ -1.89
SF3B1-208ENST00000470268 OPRPNQ99935 248 aaPredicted RBP3.23□□□□□ -1.89
SF3B1-208ENST00000470268 TTTY13Q9BZ97 58 aa3.23□□□□□ -1.89
SF3B1-208ENST00000470268 HSPB8Q9UJY1 196 aa3.23□□□□□ -1.89
SF3B1-208ENST00000470268 CSDC2Q9Y534 153 aaKnown RBP3.23□□□□□ -1.89
SF3B1-208ENST00000470268 DNAH1Q9P2D7 4330 aa3.22□□□□□ -1.89
SF3B1-208ENST00000470268 IGLV5-37A0A075B6J1 123 aa3.22□□□□□ -1.89
SF3B1-208ENST00000470268 TSPAN13O95857 204 aa3.22□□□□□ -1.89
SF3B1-208ENST00000470268 VPREB1P12018 145 aa3.22□□□□□ -1.89
SF3B1-208ENST00000470268 MPV17L2Q567V2 206 aa3.22□□□□□ -1.89
SF3B1-208ENST00000470268 BVES-AS1Q5T3Y7 98 aa3.22□□□□□ -1.89
SF3B1-208ENST00000470268 DAZ4Q86SG3 579 aaKnown RBP3.22□□□□□ -1.89
SF3B1-208ENST00000470268 C15orf53Q8NAA6 179 aa3.22□□□□□ -1.89
SF3B1-208ENST00000470268 CHCHD7Q9BUK0 85 aa3.22□□□□□ -1.89
SF3B1-208ENST00000470268 KRTAP1-5Q9BYS1 174 aa3.22□□□□□ -1.89
SF3B1-208ENST00000470268 GTSF1LQ9H1H1 148 aa3.22□□□□□ -1.89
SF3B1-208ENST00000470268 NXT2Q9NPJ8 142 aaKnown RBP3.22□□□□□ -1.89
SF3B1-208ENST00000470268 DAZ3Q9NR90 486 aaKnown RBP3.22□□□□□ -1.89
SF3B1-208ENST00000470268 IGKV2D-26A0A0A0MRZ7 120 aa3.22□□□□□ -1.89
SF3B1-208ENST00000470268 TRBV6-8A0A0A6YYG3 113 aa3.22□□□□□ -1.89
SF3B1-208ENST00000470268 TRAV8-6A0A0B4J262 113 aa3.22□□□□□ -1.89
SF3B1-208ENST00000470268 PRSS1P07477 247 aa3.22□□□□□ -1.89
SF3B1-208ENST00000470268 MRPL35Q9NZE8 188 aaKnown RBP3.22□□□□□ -1.89
SF3B1-208ENST00000470268 KLK5Q9Y337 293 aaPredicted RBP3.22□□□□□ -1.89
SF3B1-208ENST00000470268 LINC00588Q9Y4M8 146 aa3.22□□□□□ -1.89
SF3B1-208ENST00000470268 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.21□□□□□ -1.9
SF3B1-208ENST00000470268 IGKV2-29A2NJV5 120 aaPredicted RBP3.21□□□□□ -1.9
SF3B1-208ENST00000470268 C6orf226Q5I0X4 101 aa3.21□□□□□ -1.9
SF3B1-208ENST00000470268 C2orf66Q6UXQ4 117 aa3.21□□□□□ -1.9
SF3B1-208ENST00000470268 Q75L30 129 aa3.21□□□□□ -1.9
SF3B1-208ENST00000470268 WFDC10BQ8IUB3 73 aa3.21□□□□□ -1.9
SF3B1-208ENST00000470268 PCP2Q8IVA1 136 aa3.21□□□□□ -1.9
SF3B1-208ENST00000470268 KIR2DL4Q99706 377 aa3.21□□□□□ -1.9
SF3B1-208ENST00000470268 TRBV25-1A0A075B6N4 114 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 RNASE13Q5GAN3 156 aaKnown RBP3.2□□□□□ -1.9
SF3B1-208ENST00000470268 LELP1Q5T871 98 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 SLC25A34Q6PIV7 304 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 SH2D6Q7Z4S9 175 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 C20orf203Q8NBC4 194 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 FAM104AQ969W3 186 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 SCGB3A1Q96QR1 104 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 HYDINQ4G0P3 5121 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 IGLV4-60A0A075B6I1 120 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 C3orf84H3BNL1 204 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 FGF6P10767 208 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 CCL18P55774 89 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 GAGE6Q13070 117 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 LGALS9CQ6DKI2 356 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 GTF2H5Q6ZYL4 71 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 Q8N9P0 234 aaPredicted RBP3.2□□□□□ -1.9
SF3B1-208ENST00000470268 BAALCQ8WXS3 180 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 TOMM6Q96B49 74 aa3.2□□□□□ -1.9
SF3B1-208ENST00000470268 VPS13DQ5THJ4 4388 aa3.19□□□□□ -1.9
SF3B1-208ENST00000470268 TENM2Q9NT68 2774 aa3.19□□□□□ -1.9
SF3B1-208ENST00000470268 IGIPA6NJ69 53 aa3.19□□□□□ -1.9
SF3B1-208ENST00000470268 K7EMI3 77 aa3.19□□□□□ -1.9
SF3B1-208ENST00000470268 NMUP48645 174 aa3.19□□□□□ -1.9
SF3B1-208ENST00000470268 ORMDL2Q53FV1 153 aa3.19□□□□□ -1.9
SF3B1-208ENST00000470268 C2orf91Q6ZV80 131 aa3.19□□□□□ -1.9
SF3B1-208ENST00000470268 SIGMAR1Q99720 223 aa3.19□□□□□ -1.9
SF3B1-208ENST00000470268 CHCHD5Q9BSY4 110 aa3.19□□□□□ -1.9
SF3B1-208ENST00000470268 TMEM243Q9BU79 118 aa3.19□□□□□ -1.9
SF3B1-208ENST00000470268 UBE2D4Q9Y2X8 147 aa3.19□□□□□ -1.9
SF3B1-208ENST00000470268 KMT2AQ03164 3969 aa3.19□□□□□ -1.9
SF3B1-208ENST00000470268 A0A087WX48 190 aa3.19□□□□□ -1.9
SF3B1-208ENST00000470268 TMEM262E9PQX1 116 aa3.19□□□□□ -1.9
SF3B1-208ENST00000470268 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.19□□□□□ -1.9
SF3B1-208ENST00000470268 K7EP34 96 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms