RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 IGHV3OR16-9A0A0B4J2B5 98 aa6.93□□□□□ -1.3
SMC1A-206ENST00000470241 EREGO14944 169 aa6.93□□□□□ -1.3
SMC1A-206ENST00000470241 NDUFA6P56556 154 aa6.93□□□□□ -1.3
SMC1A-206ENST00000470241 KRTAP10-2P60368 255 aa6.93□□□□□ -1.3
SMC1A-206ENST00000470241 COX6A2Q02221 97 aa6.93□□□□□ -1.3
SMC1A-206ENST00000470241 FAM19A3Q7Z5A8 133 aa6.93□□□□□ -1.3
SMC1A-206ENST00000470241 C15orf56Q8N910 161 aa6.93□□□□□ -1.3
SMC1A-206ENST00000470241 A0A0J9YXV3 536 aa6.92□□□□□ -1.3
SMC1A-206ENST00000470241 LEPROTL1O95214 131 aa6.92□□□□□ -1.3
SMC1A-206ENST00000470241 FUSP35637 526 aaKnown RBP eCLIP6.92□□□□□ -1.3
SMC1A-206ENST00000470241 SPATA12Q7Z6I5 190 aa6.92□□□□□ -1.3
SMC1A-206ENST00000470241 C5orf38Q86SI9 138 aa6.92□□□□□ -1.3
SMC1A-206ENST00000470241 IFI27L1Q96BM0 104 aa6.92□□□□□ -1.3
SMC1A-206ENST00000470241 LRP1BQ9NZR2 4599 aa6.91□□□□□ -1.3
SMC1A-206ENST00000470241 COX7A2LO14548 114 aa6.91□□□□□ -1.3
SMC1A-206ENST00000470241 PRSS1P07477 247 aa6.91□□□□□ -1.3
SMC1A-206ENST00000470241 IGHV1-58A0A0C4DH39 117 aa6.9□□□□□ -1.3
SMC1A-206ENST00000470241 TINCRA0A1B0GVN0 87 aa6.9□□□□□ -1.3
SMC1A-206ENST00000470241 FABP4P15090 132 aa6.9□□□□□ -1.3
SMC1A-206ENST00000470241 C14orf177Q52M58 125 aa6.9□□□□□ -1.3
SMC1A-206ENST00000470241 CFAP161Q6P656 301 aa6.9□□□□□ -1.3
SMC1A-206ENST00000470241 HSPB8Q9UJY1 196 aa6.9□□□□□ -1.3
SMC1A-206ENST00000470241 IGLV4-69A0A075B6H9 119 aa6.89□□□□□ -1.31
SMC1A-206ENST00000470241 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.89□□□□□ -1.31
SMC1A-206ENST00000470241 A0A087WZ39 114 aa6.89□□□□□ -1.31
SMC1A-206ENST00000470241 GVQW2A0A096LPI5 108 aaPredicted RBP6.89□□□□□ -1.31
SMC1A-206ENST00000470241 TRAV12-1A0A0B4J245 112 aa6.89□□□□□ -1.31
SMC1A-206ENST00000470241 hDV102S1A0JD36 115 aa6.89□□□□□ -1.31
SMC1A-206ENST00000470241 IGLC3P0DOY3 106 aa6.89□□□□□ -1.31
SMC1A-206ENST00000470241 MALP21145 153 aa6.89□□□□□ -1.31
SMC1A-206ENST00000470241 HERVK_113P63121 156 aa6.89□□□□□ -1.31
SMC1A-206ENST00000470241 SEC11AP67812 179 aa6.89□□□□□ -1.31
SMC1A-206ENST00000470241 HIGD2BQ4VC39 106 aa6.89□□□□□ -1.31
SMC1A-206ENST00000470241 NTN5Q8WTR8 489 aaPredicted RBP6.89□□□□□ -1.31
SMC1A-206ENST00000470241 GEMIN7Q9H840 131 aaKnown RBP6.89□□□□□ -1.31
SMC1A-206ENST00000470241 PGPEP1Q9NXJ5 209 aa6.89□□□□□ -1.31
SMC1A-206ENST00000470241 CDKN2A-AS1Q9UH64 79 aa6.89□□□□□ -1.31
SMC1A-206ENST00000470241 DNAH8Q96JB1 4490 aa6.88□□□□□ -1.31
SMC1A-206ENST00000470241 IGHV3-64A0A075B6Q5 118 aa6.88□□□□□ -1.31
SMC1A-206ENST00000470241 IGLV5-45A0A087WSX0 123 aa6.88□□□□□ -1.31
SMC1A-206ENST00000470241 SLPIP03973 132 aa6.88□□□□□ -1.31
SMC1A-206ENST00000470241 LINC01561Q8N1V8 128 aa6.88□□□□□ -1.31
SMC1A-206ENST00000470241 PACRGQ96M98 296 aaPredicted RBP6.88□□□□□ -1.31
SMC1A-206ENST00000470241 CHTOPQ9Y3Y2 248 aaKnown RBP6.88□□□□□ -1.31
SMC1A-206ENST00000470241 IGLV5-52A0A0A0MRZ9 124 aa6.87□□□□□ -1.31
SMC1A-206ENST00000470241 CDPF1Q6NVV7 123 aa6.87□□□□□ -1.31
SMC1A-206ENST00000470241 LINC00469Q8N7U9 141 aa6.87□□□□□ -1.31
SMC1A-206ENST00000470241 LINC00526Q96FQ7 95 aa6.87□□□□□ -1.31
SMC1A-206ENST00000470241 CHAC1Q9BUX1 264 aa6.87□□□□□ -1.31
SMC1A-206ENST00000470241 PKHD1P08F94 4074 aa6.86□□□□□ -1.31
SMC1A-206ENST00000470241 C11orf86A6NJI1 115 aa6.86□□□□□ -1.31
SMC1A-206ENST00000470241 F8VRH5 84 aa6.86□□□□□ -1.31
SMC1A-206ENST00000470241 APOMO95445 188 aa6.86□□□□□ -1.31
SMC1A-206ENST00000470241 CNBPP62633 177 aaKnown RBP6.86□□□□□ -1.31
SMC1A-206ENST00000470241 ODF1Q14990 250 aa6.86□□□□□ -1.31
SMC1A-206ENST00000470241 ORAOV1Q8WV07 137 aa6.86□□□□□ -1.31
SMC1A-206ENST00000470241 MRPL35Q9NZE8 188 aaKnown RBP6.86□□□□□ -1.31
SMC1A-206ENST00000470241 C16orf90A8MZG2 172 aa6.85□□□□□ -1.31
SMC1A-206ENST00000470241 H0Y8G0 127 aa6.85□□□□□ -1.31
SMC1A-206ENST00000470241 ZNF561-AS1K7EIQ3 104 aa6.85□□□□□ -1.31
SMC1A-206ENST00000470241 ZNF22P17026 224 aaPredicted RBP6.85□□□□□ -1.31
SMC1A-206ENST00000470241 SPAG11BQ08648 103 aa6.85□□□□□ -1.31
SMC1A-206ENST00000470241 KIAA0087Q14695 138 aa6.85□□□□□ -1.31
SMC1A-206ENST00000470241 HIST3H2BBQ8N257 126 aa6.85□□□□□ -1.31
SMC1A-206ENST00000470241 OR10D4PQ8NGN7 298 aa6.85□□□□□ -1.31
SMC1A-206ENST00000470241 MAP1LC3CQ9BXW4 147 aa6.85□□□□□ -1.31
SMC1A-206ENST00000470241 BIRC6Q9NR09 4857 aa6.85□□□□□ -1.31
SMC1A-206ENST00000470241 SMIM1B2RUZ4 78 aa6.84□□□□□ -1.31
SMC1A-206ENST00000470241 SYS1-DBNDD2H3BUS1 97 aa6.84□□□□□ -1.31
SMC1A-206ENST00000470241 S100A6P06703 90 aa6.84□□□□□ -1.31
SMC1A-206ENST00000470241 LINC01620Q4KN68 170 aa6.84□□□□□ -1.31
SMC1A-206ENST00000470241 H3BRM9 83 aa6.83□□□□□ -1.32
SMC1A-206ENST00000470241 SPINK8P0C7L1 97 aa6.83□□□□□ -1.32
SMC1A-206ENST00000470241 C3orf79P0CE67 100 aa6.83□□□□□ -1.32
SMC1A-206ENST00000470241 GCSHP23434 173 aa6.83□□□□□ -1.32
SMC1A-206ENST00000470241 KRTAP10-1P60331 282 aa6.83□□□□□ -1.32
SMC1A-206ENST00000470241 SNRPEP62304 92 aaKnown RBP6.83□□□□□ -1.32
SMC1A-206ENST00000470241 C9orf163Q8N9P6 203 aa6.83□□□□□ -1.32
SMC1A-206ENST00000470241 C2orf48Q96LS8 159 aa6.83□□□□□ -1.32
SMC1A-206ENST00000470241 APOBP04114 4563 aaKnown RBP6.83□□□□□ -1.32
SMC1A-206ENST00000470241 C5orf52A6NGY3 159 aa6.82□□□□□ -1.32
SMC1A-206ENST00000470241 SYCNQ0VAF6 134 aa6.82□□□□□ -1.32
SMC1A-206ENST00000470241 TMEM170BQ5T4T1 132 aa6.82□□□□□ -1.32
SMC1A-206ENST00000470241 HIST1H2BLQ99880 126 aa6.82□□□□□ -1.32
SMC1A-206ENST00000470241 PMCHL2Q9BQD1 86 aa6.82□□□□□ -1.32
SMC1A-206ENST00000470241 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.81□□□□□ -1.32
SMC1A-206ENST00000470241 IGLV5-39A0A0G2JS06 123 aa6.81□□□□□ -1.32
SMC1A-206ENST00000470241 S100A2P29034 98 aa6.81□□□□□ -1.32
SMC1A-206ENST00000470241 KRTDAPP60985 99 aa6.81□□□□□ -1.32
SMC1A-206ENST00000470241 C10orf25Q5T742 122 aa6.81□□□□□ -1.32
SMC1A-206ENST00000470241 PET117Q6UWS5 81 aa6.81□□□□□ -1.32
SMC1A-206ENST00000470241 Q6ZRU5 148 aa6.81□□□□□ -1.32
SMC1A-206ENST00000470241 Q8IZM0 81 aa6.81□□□□□ -1.32
SMC1A-206ENST00000470241 CARD19Q96LW7 228 aa6.81□□□□□ -1.32
SMC1A-206ENST00000470241 CAMK2N2Q96S95 79 aa6.81□□□□□ -1.32
SMC1A-206ENST00000470241 TOMM7Q9P0U1 55 aa6.81□□□□□ -1.32
SMC1A-206ENST00000470241 TMEM223A0PJW6 202 aa6.8□□□□□ -1.32
SMC1A-206ENST00000470241 F8WDY8 70 aa6.8□□□□□ -1.32
SMC1A-206ENST00000470241 DPM2O94777 84 aa6.8□□□□□ -1.32
SMC1A-206ENST00000470241 PLNP26678 52 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 235.7 ms