RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 D6R8Y8 96 aa4.14□□□□□ -1.75
PTCD3-208ENST00000469585 RTL8CO15255 209 aa4.14□□□□□ -1.75
PTCD3-208ENST00000469585 RBX1P62877 108 aa4.14□□□□□ -1.75
PTCD3-208ENST00000469585 IFITM2Q01629 132 aa4.14□□□□□ -1.75
PTCD3-208ENST00000469585 REG3AQ06141 175 aa4.14□□□□□ -1.75
PTCD3-208ENST00000469585 MRPL51Q4U2R6 128 aaKnown RBP4.14□□□□□ -1.75
PTCD3-208ENST00000469585 MPV17L2Q567V2 206 aa4.14□□□□□ -1.75
PTCD3-208ENST00000469585 ATRAIDQ6UW56 229 aa4.14□□□□□ -1.75
PTCD3-208ENST00000469585 SPATA12Q7Z6I5 190 aa4.14□□□□□ -1.75
PTCD3-208ENST00000469585 LINC00269Q8N2A0 174 aa4.14□□□□□ -1.75
PTCD3-208ENST00000469585 TMEM70Q9BUB7 260 aa4.14□□□□□ -1.75
PTCD3-208ENST00000469585 SMCO4Q9NRQ5 59 aa4.14□□□□□ -1.75
PTCD3-208ENST00000469585 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-208ENST00000469585 TRBV27A0A0K0K1C4 114 aa4.13□□□□□ -1.75
PTCD3-208ENST00000469585 K7EMI3 77 aa4.13□□□□□ -1.75
PTCD3-208ENST00000469585 CCL25O15444 150 aa4.13□□□□□ -1.75
PTCD3-208ENST00000469585 FGF6P10767 208 aa4.13□□□□□ -1.75
PTCD3-208ENST00000469585 IFI27P40305 119 aaPredicted RBP4.13□□□□□ -1.75
PTCD3-208ENST00000469585 HIGD2BQ4VC39 106 aa4.13□□□□□ -1.75
PTCD3-208ENST00000469585 ORMDL2Q53FV1 153 aa4.13□□□□□ -1.75
PTCD3-208ENST00000469585 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
PTCD3-208ENST00000469585 CLPSL2Q6UWE3 100 aa4.13□□□□□ -1.75
PTCD3-208ENST00000469585 C2orf88Q9BSF0 95 aa4.13□□□□□ -1.75
PTCD3-208ENST00000469585 NXT2Q9NPJ8 142 aaKnown RBP4.13□□□□□ -1.75
PTCD3-208ENST00000469585 TRBV24-1A0A075B6N3 115 aa4.12□□□□□ -1.75
PTCD3-208ENST00000469585 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-208ENST00000469585 A0A087WTM6 91 aa4.12□□□□□ -1.75
PTCD3-208ENST00000469585 A0A0U1RRA0 63 aa4.12□□□□□ -1.75
PTCD3-208ENST00000469585 IGKV2-29A2NJV5 120 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-208ENST00000469585 SMKR1H3BMG3 65 aa4.12□□□□□ -1.75
PTCD3-208ENST00000469585 RPL32P62910 135 aaKnown RBP4.12□□□□□ -1.75
PTCD3-208ENST00000469585 FA2HQ7L5A8 372 aa4.12□□□□□ -1.75
PTCD3-208ENST00000469585 RNF185Q96GF1 192 aa4.12□□□□□ -1.75
PTCD3-208ENST00000469585 SMIM2Q9BVW6 85 aa4.12□□□□□ -1.75
PTCD3-208ENST00000469585 GNB1LQ9BYB4 327 aa4.12□□□□□ -1.75
PTCD3-208ENST00000469585 SPANXA1Q9NS26 97 aa4.12□□□□□ -1.75
PTCD3-208ENST00000469585 Q9UF83 564 aa4.12□□□□□ -1.75
PTCD3-208ENST00000469585 CARHSP1Q9Y2V2 147 aaKnown RBP4.12□□□□□ -1.75
PTCD3-208ENST00000469585 CSMD3Q7Z407 3707 aa4.11□□□□□ -1.75
PTCD3-208ENST00000469585 LOC389332A0A1B0GUA5 103 aa4.11□□□□□ -1.75
PTCD3-208ENST00000469585 A0A1B0GXF2 115 aa4.11□□□□□ -1.75
PTCD3-208ENST00000469585 C1orf196B1AJZ1 125 aa4.11□□□□□ -1.75
PTCD3-208ENST00000469585 APOMO95445 188 aa4.11□□□□□ -1.75
PTCD3-208ENST00000469585 RAB5BP61020 215 aa4.11□□□□□ -1.75
PTCD3-208ENST00000469585 FABP9Q0Z7S8 132 aa4.11□□□□□ -1.75
PTCD3-208ENST00000469585 LINC00242Q5T6M2 205 aa4.11□□□□□ -1.75
PTCD3-208ENST00000469585 NTM-AS1Q6ZSK4 140 aa4.11□□□□□ -1.75
PTCD3-208ENST00000469585 Q8N814 137 aa4.11□□□□□ -1.75
PTCD3-208ENST00000469585 DEFB104AQ8WTQ1 72 aa4.11□□□□□ -1.75
PTCD3-208ENST00000469585 CYSLTR1Q9Y271 337 aa4.11□□□□□ -1.75
PTCD3-208ENST00000469585 IGLV10-54A0A075B6I4 117 aa4.1□□□□□ -1.75
PTCD3-208ENST00000469585 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.1□□□□□ -1.75
PTCD3-208ENST00000469585 TGIF2-C20orf24A0A0A6YYL0 155 aa4.1□□□□□ -1.75
PTCD3-208ENST00000469585 ADCYAP1P18509 176 aa4.1□□□□□ -1.75
PTCD3-208ENST00000469585 RPS10P46783 165 aaKnown RBP4.1□□□□□ -1.75
PTCD3-208ENST00000469585 POLR2KP53803 58 aaKnown RBP4.1□□□□□ -1.75
PTCD3-208ENST00000469585 SEC11AP67812 179 aa4.1□□□□□ -1.75
PTCD3-208ENST00000469585 MRPL52Q86TS9 123 aaKnown RBP4.1□□□□□ -1.75
PTCD3-208ENST00000469585 ZNF664Q8N3J9 261 aa4.1□□□□□ -1.75
PTCD3-208ENST00000469585 BAALCQ8WXS3 180 aa4.1□□□□□ -1.75
PTCD3-208ENST00000469585 DPH3Q96FX2 82 aa4.1□□□□□ -1.75
PTCD3-208ENST00000469585 TIMM21Q9BVV7 248 aa4.1□□□□□ -1.75
PTCD3-208ENST00000469585 CSDC2Q9Y534 153 aaKnown RBP4.1□□□□□ -1.75
PTCD3-208ENST00000469585 TRAPPC1Q9Y5R8 145 aa4.1□□□□□ -1.75
PTCD3-208ENST00000469585 DNAH7Q8WXX0 4024 aa4.1□□□□□ -1.75
PTCD3-208ENST00000469585 TRAV13-1A0A0B4J241 112 aa4.09□□□□□ -1.75
PTCD3-208ENST00000469585 LECT2O14960 151 aa4.09□□□□□ -1.75
PTCD3-208ENST00000469585 NPYP01303 97 aa4.09□□□□□ -1.75
PTCD3-208ENST00000469585 XCL1P47992 114 aa4.09□□□□□ -1.75
PTCD3-208ENST00000469585 C10orf91Q5T1B1 145 aa4.09□□□□□ -1.75
PTCD3-208ENST00000469585 KRTAP5-11Q6L8G4 156 aa4.09□□□□□ -1.75
PTCD3-208ENST00000469585 TEX43Q6ZNM6 134 aa4.09□□□□□ -1.75
PTCD3-208ENST00000469585 Q8N8P6 123 aa4.09□□□□□ -1.75
PTCD3-208ENST00000469585 PRR34Q9NV39 138 aa4.09□□□□□ -1.75
PTCD3-208ENST00000469585 DHRS4-AS1Q9P1J3 65 aa4.09□□□□□ -1.75
PTCD3-208ENST00000469585 IGLV4-60A0A075B6I1 120 aa4.08□□□□□ -1.76
PTCD3-208ENST00000469585 COX7A2LO14548 114 aa4.08□□□□□ -1.76
PTCD3-208ENST00000469585 ENHOQ6UWT2 76 aa4.08□□□□□ -1.76
PTCD3-208ENST00000469585 Q6ZRN7 208 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-208ENST00000469585 C20orf203Q8NBC4 194 aa4.08□□□□□ -1.76
PTCD3-208ENST00000469585 CHCHD10Q8WYQ3 142 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-208ENST00000469585 TMEM141Q96I45 108 aa4.08□□□□□ -1.76
PTCD3-208ENST00000469585 PACRGQ96M98 296 aaPredicted RBP4.08□□□□□ -1.76
PTCD3-208ENST00000469585 VCX2Q9H322 139 aa4.08□□□□□ -1.76
PTCD3-208ENST00000469585 IGHV1-58A0A0C4DH39 117 aa4.07□□□□□ -1.76
PTCD3-208ENST00000469585 LINC00959A0A1B0GUT2 108 aa4.07□□□□□ -1.76
PTCD3-208ENST00000469585 A0A1B0GVY2 172 aa4.07□□□□□ -1.76
PTCD3-208ENST00000469585 ESDP10768 282 aa4.07□□□□□ -1.76
PTCD3-208ENST00000469585 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
PTCD3-208ENST00000469585 C2orf66Q6UXQ4 117 aa4.07□□□□□ -1.76
PTCD3-208ENST00000469585 SCGB3A1Q96QR1 104 aa4.07□□□□□ -1.76
PTCD3-208ENST00000469585 GEMIN7Q9H840 131 aaKnown RBP4.07□□□□□ -1.76
PTCD3-208ENST00000469585 CDC42SE2Q9NRR3 84 aa4.07□□□□□ -1.76
PTCD3-208ENST00000469585 UBE2D4Q9Y2X8 147 aa4.07□□□□□ -1.76
PTCD3-208ENST00000469585 IGHV3-64A0A075B6Q5 118 aa4.06□□□□□ -1.76
PTCD3-208ENST00000469585 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.06□□□□□ -1.76
PTCD3-208ENST00000469585 MRPS36P82909 103 aaKnown RBP4.06□□□□□ -1.76
PTCD3-208ENST00000469585 TYMSOSQ8TAI1 123 aa4.06□□□□□ -1.76
PTCD3-208ENST00000469585 LINC00474Q9P2X8 69 aa4.06□□□□□ -1.76
PTCD3-208ENST00000469585 LRCOL1A6NCL2 159 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms