RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 IGLV11-55A0A075B6I3 123 aa7.32□□□□□ -1.24
NUP50-214ENST00000469163 IGHV4OR15-8A0A075B7B6 117 aa7.32□□□□□ -1.24
NUP50-214ENST00000469163 A0A087WW49 117 aa7.32□□□□□ -1.24
NUP50-214ENST00000469163 INAFM2P0DMQ5 153 aa7.32□□□□□ -1.24
NUP50-214ENST00000469163 MRGPRG-AS1Q2M3A8 158 aa7.32□□□□□ -1.24
NUP50-214ENST00000469163 CCDC140Q96MF4 163 aa7.32□□□□□ -1.24
NUP50-214ENST00000469163 DAD1P61803 113 aa7.32□□□□□ -1.24
NUP50-214ENST00000469163 NPBQ8NG41 125 aa7.32□□□□□ -1.24
NUP50-214ENST00000469163 SMIM2Q9BVW6 85 aa7.32□□□□□ -1.24
NUP50-214ENST00000469163 PRM2P04554 102 aa7.32□□□□□ -1.24
NUP50-214ENST00000469163 PAPPA-AS1Q5QFB9 102 aa7.32□□□□□ -1.24
NUP50-214ENST00000469163 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.32□□□□□ -1.24
NUP50-214ENST00000469163 UBE2E2Q96LR5 201 aa7.32□□□□□ -1.24
NUP50-214ENST00000469163 A6NDX4 124 aa7.31□□□□□ -1.24
NUP50-214ENST00000469163 HOXD3P31249 432 aaPredicted RBP7.31□□□□□ -1.24
NUP50-214ENST00000469163 WFDC9Q8NEX5 89 aa7.31□□□□□ -1.24
NUP50-214ENST00000469163 TOMM6Q96B49 74 aa7.31□□□□□ -1.24
NUP50-214ENST00000469163 MRPL53Q96EL3 112 aaKnown RBP7.31□□□□□ -1.24
NUP50-214ENST00000469163 H7BZZ5 65 aa7.31□□□□□ -1.24
NUP50-214ENST00000469163 LYPD5Q6UWN5 251 aa7.31□□□□□ -1.24
NUP50-214ENST00000469163 F8WEM9 126 aa7.31□□□□□ -1.24
NUP50-214ENST00000469163 NXPH4O95158 308 aa7.31□□□□□ -1.24
NUP50-214ENST00000469163 PRB2P02812 416 aaPredicted RBP7.31□□□□□ -1.24
NUP50-214ENST00000469163 RNASE4P34096 147 aaKnown RBP7.31□□□□□ -1.24
NUP50-214ENST00000469163 ADAMTSL4-AS1Q5T5F5 129 aa7.31□□□□□ -1.24
NUP50-214ENST00000469163 RNF5Q99942 180 aa7.31□□□□□ -1.24
NUP50-214ENST00000469163 EPM2AB3EWF7 344 aa7.3□□□□□ -1.24
NUP50-214ENST00000469163 PRAC2D3DTV9 90 aa7.3□□□□□ -1.24
NUP50-214ENST00000469163 SPANXN1Q5VSR9 72 aa7.3□□□□□ -1.24
NUP50-214ENST00000469163 CYSRT1A8MQ03 144 aa7.3□□□□□ -1.24
NUP50-214ENST00000469163 FAM74A4Q5TZK3 123 aa7.3□□□□□ -1.24
NUP50-214ENST00000469163 H3BS24 57 aa7.3□□□□□ -1.24
NUP50-214ENST00000469163 DAND5Q8N907 189 aa7.3□□□□□ -1.24
NUP50-214ENST00000469163 M0R381 172 aa7.29□□□□□ -1.24
NUP50-214ENST00000469163 F5H697 171 aa7.29□□□□□ -1.24
NUP50-214ENST00000469163 Q9UF83 564 aa7.29□□□□□ -1.24
NUP50-214ENST00000469163 IGHV3-73A0A0B4J1V6 119 aa7.28□□□□□ -1.24
NUP50-214ENST00000469163 IGF1P05019 195 aa7.28□□□□□ -1.24
NUP50-214ENST00000469163 ZNF80P51504 273 aaPredicted RBP7.28□□□□□ -1.24
NUP50-214ENST00000469163 Q6JHZ5 121 aa7.28□□□□□ -1.24
NUP50-214ENST00000469163 Q6YL49 198 aa7.28□□□□□ -1.24
NUP50-214ENST00000469163 DEFB131AP59861 70 aa7.28□□□□□ -1.24
NUP50-214ENST00000469163 RMI2Q96E14 147 aa7.28□□□□□ -1.24
NUP50-214ENST00000469163 WFDC10AQ9H1F0 79 aa7.28□□□□□ -1.24
NUP50-214ENST00000469163 C14orf132Q9NPU4 83 aa7.28□□□□□ -1.24
NUP50-214ENST00000469163 IGLV4-69A0A075B6H9 119 aa7.27□□□□□ -1.25
NUP50-214ENST00000469163 BUB3O43684 328 aa7.27□□□□□ -1.25
NUP50-214ENST00000469163 SUMO2P61956 95 aaKnown RBP7.27□□□□□ -1.25
NUP50-214ENST00000469163 MRPS36P82909 103 aaKnown RBP7.27□□□□□ -1.25
NUP50-214ENST00000469163 SPINK13Q1W4C9 94 aa7.27□□□□□ -1.25
NUP50-214ENST00000469163 PVRIGQ6DKI7 326 aa7.27□□□□□ -1.25
NUP50-214ENST00000469163 TMEM190Q8WZ59 177 aa7.27□□□□□ -1.25
NUP50-214ENST00000469163 LINC00846Q9NV44 126 aa7.27□□□□□ -1.25
NUP50-214ENST00000469163 A0A087WZ39 114 aa7.27□□□□□ -1.25
NUP50-214ENST00000469163 Q8N6K4 173 aa7.27□□□□□ -1.25
NUP50-214ENST00000469163 KLK9Q9UKQ9 250 aa7.27□□□□□ -1.25
NUP50-214ENST00000469163 UBE2D4Q9Y2X8 147 aa7.27□□□□□ -1.25
NUP50-214ENST00000469163 TRBV6-1A0A0K0K1D8 114 aa7.26□□□□□ -1.25
NUP50-214ENST00000469163 THAP8Q8NA92 274 aa7.26□□□□□ -1.25
NUP50-214ENST00000469163 C11orf68Q9H3H3 251 aaKnown RBP7.26□□□□□ -1.25
NUP50-214ENST00000469163 MGPP08493 103 aa7.26□□□□□ -1.25
NUP50-214ENST00000469163 AMELXQ99217 191 aa7.26□□□□□ -1.25
NUP50-214ENST00000469163 RPL39LQ96EH5 51 aaKnown RBP7.26□□□□□ -1.25
NUP50-214ENST00000469163 Q9HAA7 133 aa7.26□□□□□ -1.25
NUP50-214ENST00000469163 A0A0J9YXY3 114 aa7.25□□□□□ -1.25
NUP50-214ENST00000469163 RPL28P46779 137 aaKnown RBP7.25□□□□□ -1.25
NUP50-214ENST00000469163 KRTAP1-3Q8IUG1 177 aa7.25□□□□□ -1.25
NUP50-214ENST00000469163 PRR15Q8IV56 129 aa7.25□□□□□ -1.25
NUP50-214ENST00000469163 RBM12B-AS1Q9P1G2 102 aa7.25□□□□□ -1.25
NUP50-214ENST00000469163 LINC01006Q8NI28 216 aa7.25□□□□□ -1.25
NUP50-214ENST00000469163 ZNF625Q96I27 306 aaPredicted RBP7.25□□□□□ -1.25
NUP50-214ENST00000469163 ZNF702PQ9H963 129 aa7.25□□□□□ -1.25
NUP50-214ENST00000469163 MUC4Q99102 2169 aa7.25□□□□□ -1.25
NUP50-214ENST00000469163 CCL24O00175 119 aa7.24□□□□□ -1.25
NUP50-214ENST00000469163 APOC4P55056 127 aa7.24□□□□□ -1.25
NUP50-214ENST00000469163 CR1P17927 2039 aa7.24□□□□□ -1.25
NUP50-214ENST00000469163 PLAC8L1A1L4L8 177 aa7.24□□□□□ -1.25
NUP50-214ENST00000469163 DEFB4AO15263 64 aa7.24□□□□□ -1.25
NUP50-214ENST00000469163 AKAP9Q99996 3911 aa7.24□□□□□ -1.25
NUP50-214ENST00000469163 RPL39P62891 51 aaKnown RBP7.24□□□□□ -1.25
NUP50-214ENST00000469163 CFHR3Q02985 330 aa7.24□□□□□ -1.25
NUP50-214ENST00000469163 Q6ZRU5 148 aa7.24□□□□□ -1.25
NUP50-214ENST00000469163 ZNF580Q9UK33 172 aa7.24□□□□□ -1.25
NUP50-214ENST00000469163 LEPROTO15243 131 aa7.23□□□□□ -1.25
NUP50-214ENST00000469163 IGHV3-53P01767 116 aa7.23□□□□□ -1.25
NUP50-214ENST00000469163 VSIG2Q96IQ7 327 aa7.23□□□□□ -1.25
NUP50-214ENST00000469163 F8W735 103 aaPredicted RBP7.23□□□□□ -1.25
NUP50-214ENST00000469163 FAM229BQ4G0N7 80 aa7.23□□□□□ -1.25
NUP50-214ENST00000469163 TMEM61Q8N0U2 210 aa7.23□□□□□ -1.25
NUP50-214ENST00000469163 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.23□□□□□ -1.25
NUP50-214ENST00000469163 HTN3P15516 51 aa7.23□□□□□ -1.25
NUP50-214ENST00000469163 ENHOQ6UWT2 76 aa7.23□□□□□ -1.25
NUP50-214ENST00000469163 USMG5Q96IX5 58 aa7.22□□□□□ -1.25
NUP50-214ENST00000469163 H3BRN7 92 aa7.22□□□□□ -1.25
NUP50-214ENST00000469163 TMEM14CQ9P0S9 112 aa7.22□□□□□ -1.25
NUP50-214ENST00000469163 A0A096LNT2 108 aa7.22□□□□□ -1.25
NUP50-214ENST00000469163 COX7A2LO14548 114 aa7.22□□□□□ -1.25
NUP50-214ENST00000469163 C6orf223Q8N319 242 aa7.21□□□□□ -1.25
NUP50-214ENST00000469163 PKD1L1Q8TDX9 2849 aa7.21□□□□□ -1.25
NUP50-214ENST00000469163 CNFNQ9BYD5 112 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms