RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 ZNF561-AS1K7EIQ3 104 aa9.55□□□□□ -0.88
TMEM39A-205ENST00000468676 SLPIP03973 132 aa9.55□□□□□ -0.88
TMEM39A-205ENST00000468676 SDIM1Q6ZPB5 146 aa9.55□□□□□ -0.88
TMEM39A-205ENST00000468676 TIMM17AQ99595 171 aa9.55□□□□□ -0.88
TMEM39A-205ENST00000468676 CHAC1Q9BUX1 264 aa9.55□□□□□ -0.88
TMEM39A-205ENST00000468676 ERASQ7Z444 233 aa9.54□□□□□ -0.88
TMEM39A-205ENST00000468676 C5orf38Q86SI9 138 aa9.54□□□□□ -0.88
TMEM39A-205ENST00000468676 AMELXQ99217 191 aa9.54□□□□□ -0.88
TMEM39A-205ENST00000468676 PKIGQ9Y2B9 76 aa9.54□□□□□ -0.88
TMEM39A-205ENST00000468676 IGHV3OR16-9A0A0B4J2B5 98 aa9.53□□□□□ -0.88
TMEM39A-205ENST00000468676 SCGB3A1Q96QR1 104 aa9.53□□□□□ -0.88
TMEM39A-205ENST00000468676 EPM2AB3EWF7 344 aa9.52□□□□□ -0.89
TMEM39A-205ENST00000468676 FAM229AH3BQW9 127 aa9.52□□□□□ -0.89
TMEM39A-205ENST00000468676 UBE2D1P51668 147 aa9.52□□□□□ -0.89
TMEM39A-205ENST00000468676 RAB5BP61020 215 aa9.52□□□□□ -0.89
TMEM39A-205ENST00000468676 SEC11AP67812 179 aa9.52□□□□□ -0.89
TMEM39A-205ENST00000468676 CBLN2Q8IUK8 224 aa9.52□□□□□ -0.89
TMEM39A-205ENST00000468676 OR10D4PQ8NGN7 298 aa9.52□□□□□ -0.89
TMEM39A-205ENST00000468676 C18orf32Q8TCD1 76 aa9.52□□□□□ -0.89
TMEM39A-205ENST00000468676 F8WDY8 70 aa9.51□□□□□ -0.89
TMEM39A-205ENST00000468676 LINC00614P0C842 121 aa9.51□□□□□ -0.89
TMEM39A-205ENST00000468676 HAMPP81172 84 aa9.51□□□□□ -0.89
TMEM39A-205ENST00000468676 LINC00242Q5T6M2 205 aa9.51□□□□□ -0.89
TMEM39A-205ENST00000468676 SCXQ7RTU7 201 aa9.51□□□□□ -0.89
TMEM39A-205ENST00000468676 A0A087WZ39 114 aa9.5□□□□□ -0.89
TMEM39A-205ENST00000468676 SYCNQ0VAF6 134 aa9.5□□□□□ -0.89
TMEM39A-205ENST00000468676 LINC00173Q6ZV60 143 aa9.5□□□□□ -0.89
TMEM39A-205ENST00000468676 C2orf48Q96LS8 159 aa9.5□□□□□ -0.89
TMEM39A-205ENST00000468676 CARD19Q96LW7 228 aa9.5□□□□□ -0.89
TMEM39A-205ENST00000468676 KRTAP17-1Q9BYP8 105 aa9.5□□□□□ -0.89
TMEM39A-205ENST00000468676 IGLV4-69A0A075B6H9 119 aa9.49□□□□□ -0.89
TMEM39A-205ENST00000468676 SMR3BP02814 79 aaPredicted RBP9.49□□□□□ -0.89
TMEM39A-205ENST00000468676 FAM19A3Q7Z5A8 133 aa9.49□□□□□ -0.89
TMEM39A-205ENST00000468676 LINC01561Q8N1V8 128 aa9.49□□□□□ -0.89
TMEM39A-205ENST00000468676 CIRBP-AS1Q8TBR5 109 aa9.49□□□□□ -0.89
TMEM39A-205ENST00000468676 DNAH8Q96JB1 4490 aa9.48□□□□□ -0.89
TMEM39A-205ENST00000468676 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
TMEM39A-205ENST00000468676 CIRBPQ14011 172 aaKnown RBP9.48□□□□□ -0.89
TMEM39A-205ENST00000468676 ORAOV1Q8WV07 137 aa9.48□□□□□ -0.89
TMEM39A-205ENST00000468676 LINC00526Q96FQ7 95 aa9.48□□□□□ -0.89
TMEM39A-205ENST00000468676 CAMK2N2Q96S95 79 aa9.48□□□□□ -0.89
TMEM39A-205ENST00000468676 KRTAP4-5Q9BYR2 181 aa9.48□□□□□ -0.89
TMEM39A-205ENST00000468676 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.47□□□□□ -0.89
TMEM39A-205ENST00000468676 HERVK_113P63121 156 aa9.47□□□□□ -0.89
TMEM39A-205ENST00000468676 COX6A2Q02221 97 aa9.47□□□□□ -0.89
TMEM39A-205ENST00000468676 LCE2AQ5TA79 106 aaPredicted RBP9.47□□□□□ -0.89
TMEM39A-205ENST00000468676 ZC2HC1BQ5TFG8 222 aa9.47□□□□□ -0.89
TMEM39A-205ENST00000468676 Q5VSD8 79 aa9.47□□□□□ -0.89
TMEM39A-205ENST00000468676 DPH3Q96FX2 82 aa9.47□□□□□ -0.89
TMEM39A-205ENST00000468676 LINC00474Q9P2X8 69 aa9.47□□□□□ -0.89
TMEM39A-205ENST00000468676 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.47□□□□□ -0.89
TMEM39A-205ENST00000468676 PCLOQ9Y6V0 5065 aa9.47□□□□□ -0.89
TMEM39A-205ENST00000468676 HBDP02042 147 aa9.46□□□□□ -0.9
TMEM39A-205ENST00000468676 GEMIN7Q9H840 131 aaKnown RBP9.46□□□□□ -0.9
TMEM39A-205ENST00000468676 RNF151Q2KHN1 245 aa9.45□□□□□ -0.9
TMEM39A-205ENST00000468676 SPACA4Q8TDM5 124 aa9.45□□□□□ -0.9
TMEM39A-205ENST00000468676 CHCHD1Q96BP2 118 aaKnown RBP9.45□□□□□ -0.9
TMEM39A-205ENST00000468676 URB1-AS1Q96HZ7 61 aa9.45□□□□□ -0.9
TMEM39A-205ENST00000468676 PLA2G1BP04054 148 aaKnown RBP9.44□□□□□ -0.9
TMEM39A-205ENST00000468676 PMVKQ15126 192 aa9.44□□□□□ -0.9
TMEM39A-205ENST00000468676 Q6ZRU5 148 aa9.44□□□□□ -0.9
TMEM39A-205ENST00000468676 LINC00528Q8N1L1 170 aa9.44□□□□□ -0.9
TMEM39A-205ENST00000468676 CST9LQ9H4G1 147 aa9.44□□□□□ -0.9
TMEM39A-205ENST00000468676 A0A096LNJ9 63 aa9.43□□□□□ -0.9
TMEM39A-205ENST00000468676 LOC107984640A0A0U1RRK4 108 aa9.43□□□□□ -0.9
TMEM39A-205ENST00000468676 TINCRA0A1B0GVN0 87 aa9.43□□□□□ -0.9
TMEM39A-205ENST00000468676 PANO1I0J062 215 aa9.43□□□□□ -0.9
TMEM39A-205ENST00000468676 NDUFA1O15239 70 aa9.43□□□□□ -0.9
TMEM39A-205ENST00000468676 ATP5LO75964 103 aa9.43□□□□□ -0.9
TMEM39A-205ENST00000468676 MRPL35Q9NZE8 188 aaKnown RBP9.43□□□□□ -0.9
TMEM39A-205ENST00000468676 A0A0J9YXV3 536 aa9.42□□□□□ -0.9
TMEM39A-205ENST00000468676 COLCA2A8K830 154 aa9.42□□□□□ -0.9
TMEM39A-205ENST00000468676 TRGC2P03986 189 aa9.42□□□□□ -0.9
TMEM39A-205ENST00000468676 CHTF8P0CG12 524 aa9.42□□□□□ -0.9
TMEM39A-205ENST00000468676 PDZD11Q5EBL8 140 aa9.42□□□□□ -0.9
TMEM39A-205ENST00000468676 SRRM2Q9UQ35 2752 aaKnown RBP9.42□□□□□ -0.9
TMEM39A-205ENST00000468676 A0A087WYN8 130 aa9.41□□□□□ -0.9
TMEM39A-205ENST00000468676 IGKV2-24A0A0C4DH68 120 aa9.41□□□□□ -0.9
TMEM39A-205ENST00000468676 PRSS2P07478 247 aa9.41□□□□□ -0.9
TMEM39A-205ENST00000468676 KIAA0087Q14695 138 aa9.41□□□□□ -0.9
TMEM39A-205ENST00000468676 MAJINQ3KP22 176 aa9.41□□□□□ -0.9
TMEM39A-205ENST00000468676 BAGE3Q86Y29 109 aa9.41□□□□□ -0.9
TMEM39A-205ENST00000468676 PACRGQ96M98 296 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-205ENST00000468676 PLAC8Q9NZF1 115 aa9.41□□□□□ -0.9
TMEM39A-205ENST00000468676 CDKN2A-AS1Q9UH64 79 aa9.41□□□□□ -0.9
TMEM39A-205ENST00000468676 ABCA13Q86UQ4 5058 aa9.4□□□□□ -0.9
TMEM39A-205ENST00000468676 A0A096LNI7 61 aa9.4□□□□□ -0.9
TMEM39A-205ENST00000468676 PMCHL1Q16048 86 aa9.4□□□□□ -0.9
TMEM39A-205ENST00000468676 LINC00469Q8N7U9 141 aa9.4□□□□□ -0.9
TMEM39A-205ENST00000468676 VPS13BQ7Z7G8 4022 aa9.39□□□□□ -0.91
TMEM39A-205ENST00000468676 IGLV5-45A0A087WSX0 123 aa9.39□□□□□ -0.91
TMEM39A-205ENST00000468676 LOC100996750A0A140TA64 210 aa9.39□□□□□ -0.91
TMEM39A-205ENST00000468676 PTTG1IPP53801 180 aa9.39□□□□□ -0.91
TMEM39A-205ENST00000468676 NDUFA6P56556 154 aa9.39□□□□□ -0.91
TMEM39A-205ENST00000468676 Q8IZM0 81 aa9.39□□□□□ -0.91
TMEM39A-205ENST00000468676 KRTAP4-6Q9BYQ5 205 aa9.39□□□□□ -0.91
TMEM39A-205ENST00000468676 FAT1Q14517 4588 aa9.39□□□□□ -0.91
TMEM39A-205ENST00000468676 TRBV30A0A0K0K1B3 111 aa9.38□□□□□ -0.91
TMEM39A-205ENST00000468676 INAFM2P0DMQ5 153 aa9.38□□□□□ -0.91
TMEM39A-205ENST00000468676 CKS1BP61024 79 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms