RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 C18orf32Q8TCD1 76 aa12.92□□□□□ -0.34
NPHP4-206ENST00000468253 C2orf88Q9BSF0 95 aa12.92□□□□□ -0.34
NPHP4-206ENST00000468253 APOMO95445 188 aa12.91□□□□□ -0.34
NPHP4-206ENST00000468253 LINC00614P0C842 121 aa12.91□□□□□ -0.34
NPHP4-206ENST00000468253 RAB5BP61020 215 aa12.91□□□□□ -0.34
NPHP4-206ENST00000468253 HIGD2BQ4VC39 106 aa12.91□□□□□ -0.34
NPHP4-206ENST00000468253 C5orf38Q86SI9 138 aa12.91□□□□□ -0.34
NPHP4-206ENST00000468253 IGHV3-64A0A075B6Q5 118 aa12.9□□□□□ -0.34
NPHP4-206ENST00000468253 ZNF561-AS1K7EIQ3 104 aa12.9□□□□□ -0.34
NPHP4-206ENST00000468253 UBE2D1P51668 147 aa12.9□□□□□ -0.34
NPHP4-206ENST00000468253 LINC00242Q5T6M2 205 aa12.9□□□□□ -0.34
NPHP4-206ENST00000468253 FAM19A3Q7Z5A8 133 aa12.9□□□□□ -0.34
NPHP4-206ENST00000468253 SCGB3A1Q96QR1 104 aa12.9□□□□□ -0.34
NPHP4-206ENST00000468253 CHAC1Q9BUX1 264 aa12.9□□□□□ -0.34
NPHP4-206ENST00000468253 LINC00173Q6ZV60 143 aa12.88□□□□□ -0.35
NPHP4-206ENST00000468253 LINC01561Q8N1V8 128 aa12.88□□□□□ -0.35
NPHP4-206ENST00000468253 KRTAP17-1Q9BYP8 105 aa12.88□□□□□ -0.35
NPHP4-206ENST00000468253 A0A087WZ39 114 aa12.87□□□□□ -0.35
NPHP4-206ENST00000468253 F8WDY8 70 aa12.87□□□□□ -0.35
NPHP4-206ENST00000468253 SEC11AP67812 179 aa12.87□□□□□ -0.35
NPHP4-206ENST00000468253 OR10D4PQ8NGN7 298 aa12.87□□□□□ -0.35
NPHP4-206ENST00000468253 C2orf48Q96LS8 159 aa12.87□□□□□ -0.35
NPHP4-206ENST00000468253 COX6A2Q02221 97 aa12.86□□□□□ -0.35
NPHP4-206ENST00000468253 URB1-AS1Q96HZ7 61 aa12.86□□□□□ -0.35
NPHP4-206ENST00000468253 FAT1Q14517 4588 aa12.85□□□□□ -0.35
NPHP4-206ENST00000468253 SYCNQ0VAF6 134 aa12.85□□□□□ -0.35
NPHP4-206ENST00000468253 IGLV4-69A0A075B6H9 119 aa12.84□□□□□ -0.35
NPHP4-206ENST00000468253 CIRBPQ14011 172 aaKnown RBP12.84□□□□□ -0.35
NPHP4-206ENST00000468253 ZC2HC1BQ5TFG8 222 aa12.84□□□□□ -0.35
NPHP4-206ENST00000468253 PKIGQ9Y2B9 76 aa12.84□□□□□ -0.35
NPHP4-206ENST00000468253 COLCA2A8K830 154 aa12.83□□□□□ -0.36
NPHP4-206ENST00000468253 SCXQ7RTU7 201 aa12.83□□□□□ -0.36
NPHP4-206ENST00000468253 CIRBP-AS1Q8TBR5 109 aa12.83□□□□□ -0.36
NPHP4-206ENST00000468253 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.82□□□□□ -0.36
NPHP4-206ENST00000468253 HERVK_113P63121 156 aa12.82□□□□□ -0.36
NPHP4-206ENST00000468253 CHCHD1Q96BP2 118 aaKnown RBP12.82□□□□□ -0.36
NPHP4-206ENST00000468253 LINC00526Q96FQ7 95 aa12.82□□□□□ -0.36
NPHP4-206ENST00000468253 CARD19Q96LW7 228 aa12.82□□□□□ -0.36
NPHP4-206ENST00000468253 CST9LQ9H4G1 147 aa12.82□□□□□ -0.36
NPHP4-206ENST00000468253 A0A096LNJ9 63 aa12.81□□□□□ -0.36
NPHP4-206ENST00000468253 EPM2AB3EWF7 344 aa12.81□□□□□ -0.36
NPHP4-206ENST00000468253 FAM229AH3BQW9 127 aa12.81□□□□□ -0.36
NPHP4-206ENST00000468253 HBDP02042 147 aa12.81□□□□□ -0.36
NPHP4-206ENST00000468253 SMR3BP02814 79 aaPredicted RBP12.81□□□□□ -0.36
NPHP4-206ENST00000468253 HAMPP81172 84 aa12.81□□□□□ -0.36
NPHP4-206ENST00000468253 KRTAP4-5Q9BYR2 181 aa12.81□□□□□ -0.36
NPHP4-206ENST00000468253 TRGC2P03986 189 aa12.8□□□□□ -0.36
NPHP4-206ENST00000468253 SPAG11BQ08648 103 aa12.8□□□□□ -0.36
NPHP4-206ENST00000468253 PMVKQ15126 192 aa12.8□□□□□ -0.36
NPHP4-206ENST00000468253 RNF151Q2KHN1 245 aa12.8□□□□□ -0.36
NPHP4-206ENST00000468253 ORAOV1Q8WV07 137 aa12.8□□□□□ -0.36
NPHP4-206ENST00000468253 PDZD11Q5EBL8 140 aa12.79□□□□□ -0.36
NPHP4-206ENST00000468253 CAMK2N2Q96S95 79 aa12.79□□□□□ -0.36
NPHP4-206ENST00000468253 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-206ENST00000468253 VPS13BQ7Z7G8 4022 aa12.78□□□□□ -0.36
NPHP4-206ENST00000468253 TINCRA0A1B0GVN0 87 aa12.78□□□□□ -0.36
NPHP4-206ENST00000468253 GEMIN7Q9H840 131 aaKnown RBP12.78□□□□□ -0.36
NPHP4-206ENST00000468253 LINC00474Q9P2X8 69 aa12.78□□□□□ -0.36
NPHP4-206ENST00000468253 PANO1I0J062 215 aa12.77□□□□□ -0.37
NPHP4-206ENST00000468253 ATP5LO75964 103 aa12.77□□□□□ -0.37
NPHP4-206ENST00000468253 KIAA0087Q14695 138 aa12.77□□□□□ -0.37
NPHP4-206ENST00000468253 Q6ZRU5 148 aa12.77□□□□□ -0.37
NPHP4-206ENST00000468253 DPH3Q96FX2 82 aa12.77□□□□□ -0.37
NPHP4-206ENST00000468253 A0A0J9YXV3 536 aa12.76□□□□□ -0.37
NPHP4-206ENST00000468253 SPACA4Q8TDM5 124 aa12.76□□□□□ -0.37
NPHP4-206ENST00000468253 MRPL35Q9NZE8 188 aaKnown RBP12.76□□□□□ -0.37
NPHP4-206ENST00000468253 BAGE3Q86Y29 109 aa12.75□□□□□ -0.37
NPHP4-206ENST00000468253 CDKN2A-AS1Q9UH64 79 aa12.75□□□□□ -0.37
NPHP4-206ENST00000468253 IGLV5-45A0A087WSX0 123 aa12.74□□□□□ -0.37
NPHP4-206ENST00000468253 LOC107984640A0A0U1RRK4 108 aa12.74□□□□□ -0.37
NPHP4-206ENST00000468253 NDUFA1O15239 70 aa12.74□□□□□ -0.37
NPHP4-206ENST00000468253 Q5VSD8 79 aa12.74□□□□□ -0.37
NPHP4-206ENST00000468253 PMCHL1Q16048 86 aa12.73□□□□□ -0.37
NPHP4-206ENST00000468253 PLAC8Q9NZF1 115 aa12.73□□□□□ -0.37
NPHP4-206ENST00000468253 ABCA13Q86UQ4 5058 aa12.72□□□□□ -0.37
NPHP4-206ENST00000468253 A0A087WYN8 130 aa12.72□□□□□ -0.37
NPHP4-206ENST00000468253 CHTF8P0CG12 524 aa12.72□□□□□ -0.37
NPHP4-206ENST00000468253 LINC00528Q8N1L1 170 aa12.72□□□□□ -0.37
NPHP4-206ENST00000468253 SRRM2Q9UQ35 2752 aaKnown RBP12.72□□□□□ -0.37
NPHP4-206ENST00000468253 PLA2G1BP04054 148 aaKnown RBP12.71□□□□□ -0.37
NPHP4-206ENST00000468253 UNQ6190/PRO20217Q6UXQ8 127 aa12.71□□□□□ -0.37
NPHP4-206ENST00000468253 PACRGQ96M98 296 aaPredicted RBP12.71□□□□□ -0.37
NPHP4-206ENST00000468253 PCLOQ9Y6V0 5065 aa12.7□□□□□ -0.38
NPHP4-206ENST00000468253 A0A096LNI7 61 aa12.7□□□□□ -0.38
NPHP4-206ENST00000468253 MAJINQ3KP22 176 aa12.7□□□□□ -0.38
NPHP4-206ENST00000468253 C6orf226Q5I0X4 101 aa12.7□□□□□ -0.38
NPHP4-206ENST00000468253 Q8IZM0 81 aa12.7□□□□□ -0.38
NPHP4-206ENST00000468253 LINC00469Q8N7U9 141 aa12.7□□□□□ -0.38
NPHP4-206ENST00000468253 IGKV2-24A0A0C4DH68 120 aa12.69□□□□□ -0.38
NPHP4-206ENST00000468253 HSBP1O75506 76 aa12.69□□□□□ -0.38
NPHP4-206ENST00000468253 SCO1O75880 301 aa12.69□□□□□ -0.38
NPHP4-206ENST00000468253 PRSS2P07478 247 aa12.69□□□□□ -0.38
NPHP4-206ENST00000468253 TLX1NBP0CAT3 122 aa12.69□□□□□ -0.38
NPHP4-206ENST00000468253 IGLC3P0DOY3 106 aa12.69□□□□□ -0.38
NPHP4-206ENST00000468253 PTTG1IPP53801 180 aa12.69□□□□□ -0.38
NPHP4-206ENST00000468253 NDUFA6P56556 154 aa12.69□□□□□ -0.38
NPHP4-206ENST00000468253 C10orf25Q5T742 122 aa12.69□□□□□ -0.38
NPHP4-206ENST00000468253 TRBV30A0A0K0K1B3 111 aa12.68□□□□□ -0.38
NPHP4-206ENST00000468253 H3BRM9 83 aa12.67□□□□□ -0.38
NPHP4-206ENST00000468253 TRAV12-1A0A0B4J245 112 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms