RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 GEMIN7Q9H840 131 aaKnown RBP10.06□□□□□ -0.8
SNIP1-202ENST00000468040 TINCRA0A1B0GVN0 87 aa10.05□□□□□ -0.8
SNIP1-202ENST00000468040 C14orf177Q52M58 125 aa10.05□□□□□ -0.8
SNIP1-202ENST00000468040 A0A0J9YXV3 536 aa10.04□□□□□ -0.8
SNIP1-202ENST00000468040 USP17L23D6RBM5 183 aa10.04□□□□□ -0.8
SNIP1-202ENST00000468040 MALP21145 153 aa10.04□□□□□ -0.8
SNIP1-202ENST00000468040 S100A2P29034 98 aa10.04□□□□□ -0.8
SNIP1-202ENST00000468040 LECT2O14960 151 aa10.03□□□□□ -0.8
SNIP1-202ENST00000468040 IGLC3P0DOY3 106 aa10.03□□□□□ -0.8
SNIP1-202ENST00000468040 COX6A2Q02221 97 aa10.03□□□□□ -0.8
SNIP1-202ENST00000468040 RYR3Q15413 4870 aa10.03□□□□□ -0.8
SNIP1-202ENST00000468040 C5orf38Q86SI9 138 aa10.03□□□□□ -0.8
SNIP1-202ENST00000468040 HIST3H2BBQ8N257 126 aa10.03□□□□□ -0.8
SNIP1-202ENST00000468040 CHTOPQ9Y3Y2 248 aaKnown RBP10.03□□□□□ -0.8
SNIP1-202ENST00000468040 A0A087WZ39 114 aa10.02□□□□□ -0.81
SNIP1-202ENST00000468040 IGHV1-58A0A0C4DH39 117 aa10.02□□□□□ -0.81
SNIP1-202ENST00000468040 F8VRH5 84 aa10.02□□□□□ -0.81
SNIP1-202ENST00000468040 H0Y8G0 127 aa10.02□□□□□ -0.81
SNIP1-202ENST00000468040 APOMO95445 188 aa10.02□□□□□ -0.81
SNIP1-202ENST00000468040 WFDC2Q14508 124 aa10.02□□□□□ -0.81
SNIP1-202ENST00000468040 LINC01561Q8N1V8 128 aa10.02□□□□□ -0.81
SNIP1-202ENST00000468040 Q8N814 137 aa10.02□□□□□ -0.81
SNIP1-202ENST00000468040 CHAC1Q9BUX1 264 aa10.02□□□□□ -0.81
SNIP1-202ENST00000468040 DNAH2Q9P225 4427 aa10.01□□□□□ -0.81
SNIP1-202ENST00000468040 IGLV4-69A0A075B6H9 119 aa10.01□□□□□ -0.81
SNIP1-202ENST00000468040 IGLV5-45A0A087WSX0 123 aa10.01□□□□□ -0.81
SNIP1-202ENST00000468040 C5orf52A6NGY3 159 aa10.01□□□□□ -0.81
SNIP1-202ENST00000468040 SNRPEP62304 92 aaKnown RBP10.01□□□□□ -0.81
SNIP1-202ENST00000468040 LINC00469Q8N7U9 141 aa10.01□□□□□ -0.81
SNIP1-202ENST00000468040 SYS1-DBNDD2H3BUS1 97 aa10□□□□□ -0.81
SNIP1-202ENST00000468040 ODF1Q14990 250 aa10□□□□□ -0.81
SNIP1-202ENST00000468040 SPATA12Q7Z6I5 190 aa10□□□□□ -0.81
SNIP1-202ENST00000468040 C15orf56Q8N910 161 aa10□□□□□ -0.81
SNIP1-202ENST00000468040 HIST1H2BLQ99880 126 aa10□□□□□ -0.81
SNIP1-202ENST00000468040 MRPL35Q9NZE8 188 aaKnown RBP10□□□□□ -0.81
SNIP1-202ENST00000468040 CDKN2A-AS1Q9UH64 79 aa10□□□□□ -0.81
SNIP1-202ENST00000468040 GVQW2A0A096LPI5 108 aaPredicted RBP9.99□□□□□ -0.81
SNIP1-202ENST00000468040 H3BRM9 83 aa9.99□□□□□ -0.81
SNIP1-202ENST00000468040 IGHV3-64A0A075B6Q5 118 aa9.98□□□□□ -0.81
SNIP1-202ENST00000468040 hDV102S1A0JD36 115 aa9.98□□□□□ -0.81
SNIP1-202ENST00000468040 C11orf86A6NJI1 115 aa9.98□□□□□ -0.81
SNIP1-202ENST00000468040 PLNP26678 52 aa9.98□□□□□ -0.81
SNIP1-202ENST00000468040 KRTDAPP60985 99 aa9.98□□□□□ -0.81
SNIP1-202ENST00000468040 PET117Q6UWS5 81 aa9.98□□□□□ -0.81
SNIP1-202ENST00000468040 OR10D4PQ8NGN7 298 aa9.98□□□□□ -0.81
SNIP1-202ENST00000468040 TMA7Q9Y2S6 64 aaKnown RBP9.98□□□□□ -0.81
SNIP1-202ENST00000468040 C3orf79P0CE67 100 aa9.97□□□□□ -0.81
SNIP1-202ENST00000468040 ZNF22P17026 224 aaPredicted RBP9.97□□□□□ -0.81
SNIP1-202ENST00000468040 HIGD2BQ4VC39 106 aa9.97□□□□□ -0.81
SNIP1-202ENST00000468040 NTN5Q8WTR8 489 aaPredicted RBP9.97□□□□□ -0.81
SNIP1-202ENST00000468040 ORAOV1Q8WV07 137 aa9.97□□□□□ -0.81
SNIP1-202ENST00000468040 DNAH17Q9UFH2 4485 aa9.97□□□□□ -0.81
SNIP1-202ENST00000468040 DNAH10Q8IVF4 4471 aa9.96□□□□□ -0.81
SNIP1-202ENST00000468040 A0A1B0GVY2 172 aa9.96□□□□□ -0.82
SNIP1-202ENST00000468040 ZNF561-AS1K7EIQ3 104 aa9.96□□□□□ -0.82
SNIP1-202ENST00000468040 DPM2O94777 84 aa9.96□□□□□ -0.82
SNIP1-202ENST00000468040 TMEM170BQ5T4T1 132 aa9.96□□□□□ -0.82
SNIP1-202ENST00000468040 PGPEP1Q9NXJ5 209 aa9.96□□□□□ -0.82
SNIP1-202ENST00000468040 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.95□□□□□ -0.82
SNIP1-202ENST00000468040 C20orf202A1L168 122 aa9.95□□□□□ -0.82
SNIP1-202ENST00000468040 SPAG11BQ08648 103 aa9.95□□□□□ -0.82
SNIP1-202ENST00000468040 C4orf48Q5BLP8 95 aa9.95□□□□□ -0.82
SNIP1-202ENST00000468040 LINC01545Q5VT33 79 aa9.95□□□□□ -0.82
SNIP1-202ENST00000468040 CDPF1Q6NVV7 123 aa9.95□□□□□ -0.82
SNIP1-202ENST00000468040 SMIM1B2RUZ4 78 aa9.94□□□□□ -0.82
SNIP1-202ENST00000468040 IGKCP01834 107 aa9.94□□□□□ -0.82
SNIP1-202ENST00000468040 IGLV5-52A0A0A0MRZ9 124 aa9.93□□□□□ -0.82
SNIP1-202ENST00000468040 PRSS2P07478 247 aa9.93□□□□□ -0.82
SNIP1-202ENST00000468040 CNBPP62633 177 aaKnown RBP9.93□□□□□ -0.82
SNIP1-202ENST00000468040 PMCHL2Q9BQD1 86 aa9.93□□□□□ -0.82
SNIP1-202ENST00000468040 FRAS1Q86XX4 4008 aa9.92□□□□□ -0.82
SNIP1-202ENST00000468040 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.92□□□□□ -0.82
SNIP1-202ENST00000468040 F8WDY8 70 aa9.92□□□□□ -0.82
SNIP1-202ENST00000468040 SPINK8P0C7L1 97 aa9.92□□□□□ -0.82
SNIP1-202ENST00000468040 AKR1D1P51857 326 aa9.92□□□□□ -0.82
SNIP1-202ENST00000468040 KRTAP10-2P60368 255 aa9.92□□□□□ -0.82
SNIP1-202ENST00000468040 Q8IZM0 81 aa9.92□□□□□ -0.82
SNIP1-202ENST00000468040 C2orf48Q96LS8 159 aa9.92□□□□□ -0.82
SNIP1-202ENST00000468040 LINC00526Q96FQ7 95 aa9.91□□□□□ -0.82
SNIP1-202ENST00000468040 TOMM7Q9P0U1 55 aa9.91□□□□□ -0.82
SNIP1-202ENST00000468040 FAT2Q9NYQ8 4349 aa9.91□□□□□ -0.82
SNIP1-202ENST00000468040 IGLV5-39A0A0G2JS06 123 aa9.9□□□□□ -0.82
SNIP1-202ENST00000468040 TMEM223A0PJW6 202 aa9.9□□□□□ -0.82
SNIP1-202ENST00000468040 KIAA0087Q14695 138 aa9.9□□□□□ -0.82
SNIP1-202ENST00000468040 CAMK2N2Q96S95 79 aa9.9□□□□□ -0.82
SNIP1-202ENST00000468040 SLPIP03973 132 aa9.89□□□□□ -0.83
SNIP1-202ENST00000468040 CKS1BP61024 79 aa9.89□□□□□ -0.83
SNIP1-202ENST00000468040 HERVK_113P61574 105 aa9.89□□□□□ -0.83
SNIP1-202ENST00000468040 SYCNQ0VAF6 134 aa9.89□□□□□ -0.83
SNIP1-202ENST00000468040 C6orf226Q5I0X4 101 aa9.89□□□□□ -0.83
SNIP1-202ENST00000468040 COX7B2Q8TF08 81 aa9.89□□□□□ -0.83
SNIP1-202ENST00000468040 CARD19Q96LW7 228 aa9.89□□□□□ -0.83
SNIP1-202ENST00000468040 NDUFA1O15239 70 aa9.88□□□□□ -0.83
SNIP1-202ENST00000468040 FUSP35637 526 aaKnown RBP eCLIP9.88□□□□□ -0.83
SNIP1-202ENST00000468040 CXCL5P42830 114 aa9.88□□□□□ -0.83
SNIP1-202ENST00000468040 C16orf90A8MZG2 172 aa9.87□□□□□ -0.83
SNIP1-202ENST00000468040 C9orf163Q8N9P6 203 aa9.87□□□□□ -0.83
SNIP1-202ENST00000468040 GCSHP23434 173 aa9.86□□□□□ -0.83
SNIP1-202ENST00000468040 Q6ZRU5 148 aa9.86□□□□□ -0.83
SNIP1-202ENST00000468040 SFTA2Q6UW10 78 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms