RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 SDHAF1A6NFY7 115 aa6.24□□□□□ -1.41
VPS26A-204ENST00000467852 MZT2BQ6NZ67 158 aa6.24□□□□□ -1.41
VPS26A-204ENST00000467852 GATD1Q8NB37 220 aa6.24□□□□□ -1.41
VPS26A-204ENST00000467852 HSPB11Q9Y547 144 aa6.24□□□□□ -1.41
VPS26A-204ENST00000467852 CENPXA8MT69 81 aa6.23□□□□□ -1.41
VPS26A-204ENST00000467852 SLC25A20O43772 301 aa6.23□□□□□ -1.41
VPS26A-204ENST00000467852 RPL39LQ96EH5 51 aaKnown RBP6.23□□□□□ -1.41
VPS26A-204ENST00000467852 LINC00167Q96N53 147 aa6.23□□□□□ -1.41
VPS26A-204ENST00000467852 FAM74A7A6NL05 159 aa6.22□□□□□ -1.41
VPS26A-204ENST00000467852 ZNF727A8MUV8 499 aa6.22□□□□□ -1.41
VPS26A-204ENST00000467852 UPK1BO75841 260 aa6.22□□□□□ -1.41
VPS26A-204ENST00000467852 RNASE13Q5GAN3 156 aaKnown RBP6.22□□□□□ -1.41
VPS26A-204ENST00000467852 LYZL1Q6UWQ5 148 aa6.22□□□□□ -1.41
VPS26A-204ENST00000467852 Q8N377 158 aa6.22□□□□□ -1.41
VPS26A-204ENST00000467852 LINC00469Q8N7U9 141 aa6.22□□□□□ -1.41
VPS26A-204ENST00000467852 SEC22CQ9BRL7 303 aa6.22□□□□□ -1.41
VPS26A-204ENST00000467852 ACTR3CQ9C0K3 210 aaPredicted RBP6.22□□□□□ -1.41
VPS26A-204ENST00000467852 MBP02144 154 aa6.21□□□□□ -1.42
VPS26A-204ENST00000467852 AKR1C3P42330 323 aa6.21□□□□□ -1.42
VPS26A-204ENST00000467852 SMAGPQ0VAQ4 97 aa6.21□□□□□ -1.42
VPS26A-204ENST00000467852 Q6Q795 121 aa6.21□□□□□ -1.42
VPS26A-204ENST00000467852 FAM210AQ96ND0 272 aa6.21□□□□□ -1.42
VPS26A-204ENST00000467852 V9GYH0 126 aa6.21□□□□□ -1.42
VPS26A-204ENST00000467852 IGLC6P0CF74 106 aa6.2□□□□□ -1.42
VPS26A-204ENST00000467852 BTCP35070 178 aa6.2□□□□□ -1.42
VPS26A-204ENST00000467852 PLEKHB2Q96CS7 222 aa6.2□□□□□ -1.42
VPS26A-204ENST00000467852 XAGE1AQ9HD64 81 aa6.2□□□□□ -1.42
VPS26A-204ENST00000467852 C7orf77A4D0Y5 90 aa6.19□□□□□ -1.42
VPS26A-204ENST00000467852 F2Z2F3 143 aa6.19□□□□□ -1.42
VPS26A-204ENST00000467852 FOXA3P55318 350 aaPredicted RBP6.19□□□□□ -1.42
VPS26A-204ENST00000467852 RPS29P62273 56 aaKnown RBP6.19□□□□□ -1.42
VPS26A-204ENST00000467852 TRIQKQ629K1 86 aa6.19□□□□□ -1.42
VPS26A-204ENST00000467852 STOML3Q8TAV4 291 aa6.19□□□□□ -1.42
VPS26A-204ENST00000467852 CSDC2Q9Y534 153 aaKnown RBP6.19□□□□□ -1.42
VPS26A-204ENST00000467852 IGHV3OR16-9A0A0B4J2B5 98 aa6.18□□□□□ -1.42
VPS26A-204ENST00000467852 GAGE10A6NGK3 116 aa6.18□□□□□ -1.42
VPS26A-204ENST00000467852 DEFA1P59665 94 aa6.18□□□□□ -1.42
VPS26A-204ENST00000467852 PRLHP81277 87 aa6.18□□□□□ -1.42
VPS26A-204ENST00000467852 PNRC1Q12796 327 aaPredicted RBP6.18□□□□□ -1.42
VPS26A-204ENST00000467852 KIAA0087Q14695 138 aa6.18□□□□□ -1.42
VPS26A-204ENST00000467852 TEX261Q6UWH6 196 aa6.18□□□□□ -1.42
VPS26A-204ENST00000467852 C2orf82Q6UX34 121 aa6.18□□□□□ -1.42
VPS26A-204ENST00000467852 TCEAL7Q9BRU2 100 aa6.18□□□□□ -1.42
VPS26A-204ENST00000467852 CCDC32Q9BV29 185 aa6.18□□□□□ -1.42
VPS26A-204ENST00000467852 TMEM242Q9NWH2 141 aa6.18□□□□□ -1.42
VPS26A-204ENST00000467852 INMT-MINDY4F8WBC2 141 aa6.17□□□□□ -1.42
VPS26A-204ENST00000467852 S100A9P06702 114 aaKnown RBP6.17□□□□□ -1.42
VPS26A-204ENST00000467852 ATP6V0CP27449 155 aa6.17□□□□□ -1.42
VPS26A-204ENST00000467852 RPS20P60866 119 aaKnown RBP6.17□□□□□ -1.42
VPS26A-204ENST00000467852 BAGE2Q86Y30 109 aa6.17□□□□□ -1.42
VPS26A-204ENST00000467852 RPL32P62910 135 aaKnown RBP6.16□□□□□ -1.42
VPS26A-204ENST00000467852 FAM19A1Q7Z5A9 133 aa6.16□□□□□ -1.42
VPS26A-204ENST00000467852 GNB1LQ9BYB4 327 aa6.16□□□□□ -1.42
VPS26A-204ENST00000467852 C9orf92A6NGG3 77 aa6.15□□□□□ -1.42
VPS26A-204ENST00000467852 CCDC160A6NGH7 325 aa6.15□□□□□ -1.42
VPS26A-204ENST00000467852 SIX6O95475 246 aa6.15□□□□□ -1.42
VPS26A-204ENST00000467852 MT2AP02795 61 aa6.15□□□□□ -1.42
VPS26A-204ENST00000467852 SERF2P84101 59 aa6.15□□□□□ -1.42
VPS26A-204ENST00000467852 PSMG3Q9BT73 122 aaPredicted RBP6.15□□□□□ -1.42
VPS26A-204ENST00000467852 RAB19A4D1S5 217 aa6.14□□□□□ -1.43
VPS26A-204ENST00000467852 S100A5P33763 92 aa6.14□□□□□ -1.43
VPS26A-204ENST00000467852 TWIST1Q15672 202 aa6.14□□□□□ -1.43
VPS26A-204ENST00000467852 CST9LP1Q5W188 147 aa6.14□□□□□ -1.43
VPS26A-204ENST00000467852 CBLN2Q8IUK8 224 aa6.14□□□□□ -1.43
VPS26A-204ENST00000467852 TNFSF18Q9UNG2 199 aa6.14□□□□□ -1.43
VPS26A-204ENST00000467852 XKRY2A2RUG3 117 aa6.13□□□□□ -1.43
VPS26A-204ENST00000467852 IFNA1P01562 189 aa6.13□□□□□ -1.43
VPS26A-204ENST00000467852 Q6ZUT4 128 aa6.13□□□□□ -1.43
VPS26A-204ENST00000467852 RNASE7Q9H1E1 156 aaKnown RBP6.13□□□□□ -1.43
VPS26A-204ENST00000467852 ST20Q9HBF5 79 aa6.13□□□□□ -1.43
VPS26A-204ENST00000467852 TRBV6-5A0A0K0K1A5 114 aa6.12□□□□□ -1.43
VPS26A-204ENST00000467852 FHITP49789 147 aa6.12□□□□□ -1.43
VPS26A-204ENST00000467852 SMIM15Q7Z3B0 74 aa6.12□□□□□ -1.43
VPS26A-204ENST00000467852 SPRR4Q96PI1 79 aa6.12□□□□□ -1.43
VPS26A-204ENST00000467852 TGIF2-C20orf24A0A0A6YYL0 155 aa6.11□□□□□ -1.43
VPS26A-204ENST00000467852 CTXND1A0A1B0GTU2 59 aa6.11□□□□□ -1.43
VPS26A-204ENST00000467852 KRTAP2-3P0C7H8 128 aa6.11□□□□□ -1.43
VPS26A-204ENST00000467852 PET100P0DJ07 73 aa6.11□□□□□ -1.43
VPS26A-204ENST00000467852 KRTAP10-10P60014 251 aa6.11□□□□□ -1.43
VPS26A-204ENST00000467852 KRTAP2-4Q9BYR9 128 aa6.11□□□□□ -1.43
VPS26A-204ENST00000467852 NUDT15Q9NV35 164 aa6.11□□□□□ -1.43
VPS26A-204ENST00000467852 IGKV2-28A0A075B6P5 120 aa6.1□□□□□ -1.43
VPS26A-204ENST00000467852 PRYO14603 147 aa6.1□□□□□ -1.43
VPS26A-204ENST00000467852 IGKV2D-28P01615 120 aa6.1□□□□□ -1.43
VPS26A-204ENST00000467852 FCER1GP30273 86 aa6.1□□□□□ -1.43
VPS26A-204ENST00000467852 NKAPP1Q8N9T2 125 aa6.1□□□□□ -1.43
VPS26A-204ENST00000467852 PPP1R1CQ8WVI7 109 aa6.1□□□□□ -1.43
VPS26A-204ENST00000467852 HIGD2AQ9BW72 106 aa6.1□□□□□ -1.43
VPS26A-204ENST00000467852 ZNF706Q9Y5V0 76 aaPredicted RBP6.1□□□□□ -1.43
VPS26A-204ENST00000467852 ATP6V1G2O95670 118 aa6.09□□□□□ -1.43
VPS26A-204ENST00000467852 MT1FP04733 61 aa6.09□□□□□ -1.43
VPS26A-204ENST00000467852 CKS1BP61024 79 aa6.09□□□□□ -1.43
VPS26A-204ENST00000467852 ZNF726P1Q15940 193 aa6.09□□□□□ -1.43
VPS26A-204ENST00000467852 GEMIN7Q9H840 131 aaKnown RBP6.09□□□□□ -1.43
VPS26A-204ENST00000467852 TRBV27A0A0K0K1C4 114 aa6.08□□□□□ -1.44
VPS26A-204ENST00000467852 MPC2O95563 127 aa6.08□□□□□ -1.44
VPS26A-204ENST00000467852 PRSS2P07478 247 aa6.08□□□□□ -1.44
VPS26A-204ENST00000467852 POLR2KP53803 58 aaKnown RBP6.08□□□□□ -1.44
VPS26A-204ENST00000467852 LINC01551Q86U37 167 aa6.08□□□□□ -1.44
VPS26A-204ENST00000467852 C9orf62Q8N4C0 152 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms