RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 TMEM167BQ9NRX6 74 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 ZFP30Q9Y2G7 519 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 SSPOA2VEC9 5147 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 FCGBPQ9Y6R7 5405 aaPredicted RBP2.32□□□□□ -2.04
SSR3-204ENST00000467733 MUC21A0A140T8X8 626 aa2.32□□□□□ -2.04
SSR3-204ENST00000467733 LINC00959A0A1B0GUT2 108 aa2.32□□□□□ -2.04
SSR3-204ENST00000467733 A0A1W2PRE2 83 aa2.32□□□□□ -2.04
SSR3-204ENST00000467733 C19orf71A6NCJ1 209 aa2.32□□□□□ -2.04
SSR3-204ENST00000467733 PLA2G10O15496 165 aa2.32□□□□□ -2.04
SSR3-204ENST00000467733 ZNF861PO60384 105 aa2.32□□□□□ -2.04
SSR3-204ENST00000467733 ZNF25P17030 456 aaPredicted RBP2.32□□□□□ -2.04
SSR3-204ENST00000467733 S100A5P33763 92 aa2.32□□□□□ -2.04
SSR3-204ENST00000467733 UBE2BP63146 152 aa2.32□□□□□ -2.04
SSR3-204ENST00000467733 KRTAP19-2Q3LHN2 52 aa2.32□□□□□ -2.04
SSR3-204ENST00000467733 TRIQKQ629K1 86 aa2.32□□□□□ -2.04
SSR3-204ENST00000467733 RNASEKQ6P5S7 137 aaKnown RBP2.32□□□□□ -2.04
SSR3-204ENST00000467733 RASL11AQ6T310 242 aa2.32□□□□□ -2.04
SSR3-204ENST00000467733 FMC1Q96HJ9 113 aa2.32□□□□□ -2.04
SSR3-204ENST00000467733 LINC00167Q96N53 147 aa2.32□□□□□ -2.04
SSR3-204ENST00000467733 HSPB11Q9Y547 144 aa2.32□□□□□ -2.04
SSR3-204ENST00000467733 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.31□□□□□ -2.04
SSR3-204ENST00000467733 IGKV2-29A2NJV5 120 aaPredicted RBP2.31□□□□□ -2.04
SSR3-204ENST00000467733 CENPXA8MT69 81 aa2.31□□□□□ -2.04
SSR3-204ENST00000467733 COX7A2LO14548 114 aa2.31□□□□□ -2.04
SSR3-204ENST00000467733 NOL3O60936 208 aaKnown RBP2.31□□□□□ -2.04
SSR3-204ENST00000467733 CXorf1O96002 111 aa2.31□□□□□ -2.04
SSR3-204ENST00000467733 LTAP01374 205 aa2.31□□□□□ -2.04
SSR3-204ENST00000467733 ESDP10768 282 aa2.31□□□□□ -2.04
SSR3-204ENST00000467733 SSTP61278 116 aa2.31□□□□□ -2.04
SSR3-204ENST00000467733 UBE2G1P62253 170 aa2.31□□□□□ -2.04
SSR3-204ENST00000467733 SS18Q15532 418 aa2.31□□□□□ -2.04
SSR3-204ENST00000467733 KRTAP13-2Q52LG2 175 aa2.31□□□□□ -2.04
SSR3-204ENST00000467733 FP248Q71RG6 208 aaPredicted RBP2.31□□□□□ -2.04
SSR3-204ENST00000467733 LINC00337Q8N6G1 96 aa2.31□□□□□ -2.04
SSR3-204ENST00000467733 HIST1H2BAQ96A08 127 aa2.31□□□□□ -2.04
SSR3-204ENST00000467733 KIR2DL4Q99706 377 aa2.31□□□□□ -2.04
SSR3-204ENST00000467733 NIT2Q9NQR4 276 aa2.31□□□□□ -2.04
SSR3-204ENST00000467733 G3V3Q6 166 aa2.3□□□□□ -2.04
SSR3-204ENST00000467733 NUPR1O60356 82 aa2.3□□□□□ -2.04
SSR3-204ENST00000467733 NCR2O95944 276 aa2.3□□□□□ -2.04
SSR3-204ENST00000467733 APCSP02743 223 aa2.3□□□□□ -2.04
SSR3-204ENST00000467733 TLX1NBP0CAT3 122 aa2.3□□□□□ -2.04
SSR3-204ENST00000467733 IL7P13232 177 aa2.3□□□□□ -2.04
SSR3-204ENST00000467733 NTF3P20783 257 aa2.3□□□□□ -2.04
SSR3-204ENST00000467733 SPAG11BQ08648 103 aa2.3□□□□□ -2.04
SSR3-204ENST00000467733 C9orf129Q5T035 196 aaKnown RBP2.3□□□□□ -2.04
SSR3-204ENST00000467733 IMMP2LQ96T52 175 aa2.3□□□□□ -2.04
SSR3-204ENST00000467733 NKX6-2Q9C056 277 aaPredicted RBP2.3□□□□□ -2.04
SSR3-204ENST00000467733 SMDT1Q9H4I9 107 aa2.3□□□□□ -2.04
SSR3-204ENST00000467733 WFDC1Q9HC57 220 aa2.3□□□□□ -2.04
SSR3-204ENST00000467733 NUDT15Q9NV35 164 aa2.3□□□□□ -2.04
SSR3-204ENST00000467733 USH2AO75445 5202 aa2.3□□□□□ -2.04
SSR3-204ENST00000467733 IGLV8-61A0A075B6I0 122 aa2.29□□□□□ -2.04
SSR3-204ENST00000467733 FAM74A7A6NL05 159 aa2.29□□□□□ -2.04
SSR3-204ENST00000467733 F8WDY8 70 aa2.29□□□□□ -2.04
SSR3-204ENST00000467733 LYRM1O43325 122 aa2.29□□□□□ -2.04
SSR3-204ENST00000467733 RPL28P46779 137 aaKnown RBP2.29□□□□□ -2.04
SSR3-204ENST00000467733 UBE2G2P60604 165 aa2.29□□□□□ -2.04
SSR3-204ENST00000467733 FAM229BQ4G0N7 80 aa2.29□□□□□ -2.04
SSR3-204ENST00000467733 Q6ZVH6 145 aa2.29□□□□□ -2.04
SSR3-204ENST00000467733 OR2D3Q8NGH3 330 aa2.29□□□□□ -2.04
SSR3-204ENST00000467733 OR10D4PQ8NGN7 298 aa2.29□□□□□ -2.04
SSR3-204ENST00000467733 TMEM101Q96IK0 257 aa2.29□□□□□ -2.04
SSR3-204ENST00000467733 BTF3L4Q96K17 158 aa2.29□□□□□ -2.04
SSR3-204ENST00000467733 TCEAL7Q9BRU2 100 aa2.29□□□□□ -2.04
SSR3-204ENST00000467733 MRPL35Q9NZE8 188 aaKnown RBP2.29□□□□□ -2.04
SSR3-204ENST00000467733 C1orf196B1AJZ1 125 aa2.28□□□□□ -2.04
SSR3-204ENST00000467733 NDUFA1O15239 70 aa2.28□□□□□ -2.04
SSR3-204ENST00000467733 SERF1AO75920 110 aa2.28□□□□□ -2.04
SSR3-204ENST00000467733 MBP02144 154 aa2.28□□□□□ -2.04
SSR3-204ENST00000467733 TRGC1P0CF51 173 aa2.28□□□□□ -2.04
SSR3-204ENST00000467733 IGLC6P0CF74 106 aa2.28□□□□□ -2.04
SSR3-204ENST00000467733 PET100P0DJ07 73 aa2.28□□□□□ -2.04
SSR3-204ENST00000467733 CTRLP40313 264 aa2.28□□□□□ -2.04
SSR3-204ENST00000467733 AKR1C3P42330 323 aa2.28□□□□□ -2.04
SSR3-204ENST00000467733 MRPL52Q86TS9 123 aaKnown RBP2.28□□□□□ -2.04
SSR3-204ENST00000467733 PPP1R1CQ8WVI7 109 aa2.28□□□□□ -2.04
SSR3-204ENST00000467733 PSMG3Q9BT73 122 aaPredicted RBP2.28□□□□□ -2.04
SSR3-204ENST00000467733 ACTR3CQ9C0K3 210 aaPredicted RBP2.28□□□□□ -2.04
SSR3-204ENST00000467733 IGKV2D-26A0A0A0MRZ7 120 aa2.27□□□□□ -2.05
SSR3-204ENST00000467733 A0A1B0GVG6 124 aa2.27□□□□□ -2.05
SSR3-204ENST00000467733 M0R2T5 61 aa2.27□□□□□ -2.05
SSR3-204ENST00000467733 BCE1O60756 84 aa2.27□□□□□ -2.05
SSR3-204ENST00000467733 MPC2O95563 127 aa2.27□□□□□ -2.05
SSR3-204ENST00000467733 ATP6V0CP27449 155 aa2.27□□□□□ -2.05
SSR3-204ENST00000467733 H2BFSP57053 126 aa2.27□□□□□ -2.05
SSR3-204ENST00000467733 DEFA1P59665 94 aa2.27□□□□□ -2.05
SSR3-204ENST00000467733 SERF2P84101 59 aa2.27□□□□□ -2.05
SSR3-204ENST00000467733 ORAOV1Q8WV07 137 aa2.27□□□□□ -2.05
SSR3-204ENST00000467733 MRAP2Q96G30 205 aa2.27□□□□□ -2.05
SSR3-204ENST00000467733 TPPP3Q9BW30 176 aa2.27□□□□□ -2.05
SSR3-204ENST00000467733 CDC42SE2Q9NRR3 84 aa2.27□□□□□ -2.05
SSR3-204ENST00000467733 NDUFA13Q9P0J0 144 aa2.27□□□□□ -2.05
SSR3-204ENST00000467733 C6orf48Q9UBA6 75 aa2.27□□□□□ -2.05
SSR3-204ENST00000467733 CTXND1A0A1B0GTU2 59 aa2.26□□□□□ -2.05
SSR3-204ENST00000467733 FAM240BA0A1B0GVZ2 78 aa2.26□□□□□ -2.05
SSR3-204ENST00000467733 SDHAF1A6NFY7 115 aa2.26□□□□□ -2.05
SSR3-204ENST00000467733 S100A9P06702 114 aaKnown RBP2.26□□□□□ -2.05
SSR3-204ENST00000467733 ZNF726P1Q15940 193 aa2.26□□□□□ -2.05
SSR3-204ENST00000467733 TMEM241Q24JQ0 296 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms