RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 FHL2Q14192 279 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 LYRM7Q5U5X0 104 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 Q6ZSN1 163 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 TENM2Q9NT68 2774 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 TRGV4A0A0C4DH28 118 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 MRPL51Q4U2R6 128 aaKnown RBP4.83□□□□□ -1.64
SCAF4-204ENST00000467731 LGALS9CQ6DKI2 356 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 PCP2Q8IVA1 136 aa4.83□□□□□ -1.64
SCAF4-204ENST00000467731 DYNC2H1Q8NCM8 4307 aaKnown RBP4.82□□□□□ -1.64
SCAF4-204ENST00000467731 TRBV7-7A0A0K0K1E9 115 aa4.82□□□□□ -1.64
SCAF4-204ENST00000467731 GAS8-AS1O95177 125 aa4.82□□□□□ -1.64
SCAF4-204ENST00000467731 GATA1P15976 413 aaPredicted RBP4.82□□□□□ -1.64
SCAF4-204ENST00000467731 C4orf48Q5BLP8 95 aa4.82□□□□□ -1.64
SCAF4-204ENST00000467731 SUMO4Q6EEV6 95 aa4.82□□□□□ -1.64
SCAF4-204ENST00000467731 ANKRD29Q8N6D5 301 aa4.82□□□□□ -1.64
SCAF4-204ENST00000467731 SLC25A29Q8N8R3 303 aa4.82□□□□□ -1.64
SCAF4-204ENST00000467731 PLECQ15149 4684 aaKnown RBP4.82□□□□□ -1.64
SCAF4-204ENST00000467731 SMKR1H3BMG3 65 aa4.82□□□□□ -1.64
SCAF4-204ENST00000467731 NCR2O95944 276 aa4.82□□□□□ -1.64
SCAF4-204ENST00000467731 TRACP01848 142 aa4.82□□□□□ -1.64
SCAF4-204ENST00000467731 P0DMU3 169 aa4.82□□□□□ -1.64
SCAF4-204ENST00000467731 FAM231AP0DMU4 169 aa4.82□□□□□ -1.64
SCAF4-204ENST00000467731 FAM231CP0DMU5 169 aa4.82□□□□□ -1.64
SCAF4-204ENST00000467731 IMUPQ9GZP8 106 aa4.82□□□□□ -1.64
SCAF4-204ENST00000467731 Q9UF83 564 aa4.82□□□□□ -1.64
SCAF4-204ENST00000467731 HHLA3Q9XRX5 114 aa4.82□□□□□ -1.64
SCAF4-204ENST00000467731 D6R8Y8 96 aa4.81□□□□□ -1.64
SCAF4-204ENST00000467731 J3QQQ9 107 aa4.81□□□□□ -1.64
SCAF4-204ENST00000467731 PFN2P35080 140 aa4.81□□□□□ -1.64
SCAF4-204ENST00000467731 PLEKHB2Q96CS7 222 aa4.81□□□□□ -1.64
SCAF4-204ENST00000467731 DEFB131BA0A096LNP1 70 aa4.81□□□□□ -1.64
SCAF4-204ENST00000467731 K7EQD1 137 aa4.81□□□□□ -1.64
SCAF4-204ENST00000467731 M0QY20 66 aa4.81□□□□□ -1.64
SCAF4-204ENST00000467731 CKS2P33552 79 aa4.81□□□□□ -1.64
SCAF4-204ENST00000467731 PSMB2P49721 201 aa4.81□□□□□ -1.64
SCAF4-204ENST00000467731 PRO0255Q9UI72 69 aa4.81□□□□□ -1.64
SCAF4-204ENST00000467731 TRAV10A0A0B4J240 114 aa4.8□□□□□ -1.64
SCAF4-204ENST00000467731 A0A0J9YY99 117 aa4.8□□□□□ -1.64
SCAF4-204ENST00000467731 TRBV6-4A0A1B0GX49 114 aa4.8□□□□□ -1.64
SCAF4-204ENST00000467731 COX7CP15954 63 aa4.8□□□□□ -1.64
SCAF4-204ENST00000467731 FAM19A1Q7Z5A9 133 aa4.8□□□□□ -1.64
SCAF4-204ENST00000467731 RPL39LQ96EH5 51 aaKnown RBP4.8□□□□□ -1.64
SCAF4-204ENST00000467731 TRAV8-4A0A0B4J246 113 aa4.8□□□□□ -1.64
SCAF4-204ENST00000467731 LOC100131303A0A0U1RQF7 123 aa4.8□□□□□ -1.64
SCAF4-204ENST00000467731 DPM2O94777 84 aa4.8□□□□□ -1.64
SCAF4-204ENST00000467731 OXTP01178 125 aa4.8□□□□□ -1.64
SCAF4-204ENST00000467731 RHOHQ15669 191 aa4.8□□□□□ -1.64
SCAF4-204ENST00000467731 ORMDL3Q8N138 153 aa4.8□□□□□ -1.64
SCAF4-204ENST00000467731 TRBV25-1A0A075B6N4 114 aa4.8□□□□□ -1.64
SCAF4-204ENST00000467731 H7C1H1 209 aa4.8□□□□□ -1.64
SCAF4-204ENST00000467731 NEXN-AS1Q8NBZ9 246 aa4.8□□□□□ -1.64
SCAF4-204ENST00000467731 VSIG2Q96IQ7 327 aa4.8□□□□□ -1.64
SCAF4-204ENST00000467731 PAX4O43316 350 aa4.79□□□□□ -1.64
SCAF4-204ENST00000467731 NRACQ8N912 160 aa4.79□□□□□ -1.64
SCAF4-204ENST00000467731 TRAV13-1A0A0B4J241 112 aa4.79□□□□□ -1.64
SCAF4-204ENST00000467731 TRBV10-1A0A0K0K1A3 114 aa4.79□□□□□ -1.64
SCAF4-204ENST00000467731 NPYP01303 97 aa4.79□□□□□ -1.64
SCAF4-204ENST00000467731 GYPEP15421 78 aa4.79□□□□□ -1.64
SCAF4-204ENST00000467731 TRBV7-3A0A075B6L6 115 aa4.78□□□□□ -1.64
SCAF4-204ENST00000467731 MYMXA0A1B0GTQ4 84 aa4.78□□□□□ -1.64
SCAF4-204ENST00000467731 UBE2D3P61077 147 aa4.78□□□□□ -1.64
SCAF4-204ENST00000467731 UBE2D2P62837 147 aa4.78□□□□□ -1.64
SCAF4-204ENST00000467731 RPL36AP83881 106 aaKnown RBP4.78□□□□□ -1.64
SCAF4-204ENST00000467731 RPL36ALQ969Q0 106 aaKnown RBP4.78□□□□□ -1.64
SCAF4-204ENST00000467731 A0A096LPF7 62 aa4.77□□□□□ -1.65
SCAF4-204ENST00000467731 SDHAF1A6NFY7 115 aa4.77□□□□□ -1.65
SCAF4-204ENST00000467731 SUMO2P61956 95 aaKnown RBP4.77□□□□□ -1.65
SCAF4-204ENST00000467731 LOC107984156A0A0G2JMH3 177 aa4.77□□□□□ -1.65
SCAF4-204ENST00000467731 PPP1R17O96001 155 aa4.77□□□□□ -1.65
SCAF4-204ENST00000467731 IGKCP01834 107 aa4.77□□□□□ -1.65
SCAF4-204ENST00000467731 SRSF9Q13242 221 aaKnown RBP eCLIP4.77□□□□□ -1.65
SCAF4-204ENST00000467731 ARL17AQ8IVW1 177 aa4.77□□□□□ -1.65
SCAF4-204ENST00000467731 DEFB104AQ8WTQ1 72 aa4.77□□□□□ -1.65
SCAF4-204ENST00000467731 WWC2-AS2Q96NR7 200 aa4.77□□□□□ -1.65
SCAF4-204ENST00000467731 IGHV3-38A0A0C4DH36 116 aa4.77□□□□□ -1.65
SCAF4-204ENST00000467731 TRBV6-5A0A0K0K1A5 114 aa4.77□□□□□ -1.65
SCAF4-204ENST00000467731 LOC389332A0A1B0GUA5 103 aa4.77□□□□□ -1.65
SCAF4-204ENST00000467731 H3BNG1 76 aa4.77□□□□□ -1.65
SCAF4-204ENST00000467731 DSCR8Q96T75 97 aa4.77□□□□□ -1.65
SCAF4-204ENST00000467731 ICOSQ9Y6W8 199 aa4.77□□□□□ -1.65
SCAF4-204ENST00000467731 K7EMI3 77 aa4.76□□□□□ -1.65
SCAF4-204ENST00000467731 NDUFC2O95298 119 aa4.76□□□□□ -1.65
SCAF4-204ENST00000467731 POLR2KP53803 58 aaKnown RBP4.76□□□□□ -1.65
SCAF4-204ENST00000467731 CEMP1Q6PRD7 247 aaPredicted RBP4.76□□□□□ -1.65
SCAF4-204ENST00000467731 HIST1H4GQ99525 98 aa4.76□□□□□ -1.65
SCAF4-204ENST00000467731 FAM240AA0A1B0GVK7 77 aa4.76□□□□□ -1.65
SCAF4-204ENST00000467731 hADV29S1A0JD25 119 aa4.76□□□□□ -1.65
SCAF4-204ENST00000467731 NUPR2A6NF83 97 aa4.76□□□□□ -1.65
SCAF4-204ENST00000467731 SLC25A20O43772 301 aa4.76□□□□□ -1.65
SCAF4-204ENST00000467731 RPL13AP40429 203 aaKnown RBP4.76□□□□□ -1.65
SCAF4-204ENST00000467731 MUC7Q8TAX7 377 aa4.76□□□□□ -1.65
SCAF4-204ENST00000467731 C2orf48Q96LS8 159 aa4.76□□□□□ -1.65
SCAF4-204ENST00000467731 IFI27P40305 119 aaPredicted RBP4.75□□□□□ -1.65
SCAF4-204ENST00000467731 SMIM2Q9BVW6 85 aa4.75□□□□□ -1.65
SCAF4-204ENST00000467731 KMT2AQ03164 3969 aa4.75□□□□□ -1.65
SCAF4-204ENST00000467731 TRBV27A0A0K0K1C4 114 aa4.75□□□□□ -1.65
SCAF4-204ENST00000467731 TCL1BO95988 128 aa4.75□□□□□ -1.65
SCAF4-204ENST00000467731 CD164Q04900 197 aa4.75□□□□□ -1.65
SCAF4-204ENST00000467731 DAZ4Q86SG3 579 aaKnown RBP4.75□□□□□ -1.65
SCAF4-204ENST00000467731 LINC01600Q96MT4 127 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms