RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 TRBV30A0A0K0K1B3 111 aa6.71□□□□□ -1.34
UBR4-210ENST00000466969 PFDN1O60925 122 aa6.71□□□□□ -1.34
UBR4-210ENST00000466969 RPS20P60866 119 aaKnown RBP6.71□□□□□ -1.34
UBR4-210ENST00000466969 Q8N377 158 aa6.71□□□□□ -1.34
UBR4-210ENST00000466969 SLC25A20O43772 301 aa6.7□□□□□ -1.34
UBR4-210ENST00000466969 IGLC6P0CF74 106 aa6.7□□□□□ -1.34
UBR4-210ENST00000466969 PMCHP20382 165 aa6.7□□□□□ -1.34
UBR4-210ENST00000466969 LYZL1Q6UWQ5 148 aa6.7□□□□□ -1.34
UBR4-210ENST00000466969 MRPL52Q86TS9 123 aaKnown RBP6.7□□□□□ -1.34
UBR4-210ENST00000466969 F2Z2F3 143 aa6.69□□□□□ -1.34
UBR4-210ENST00000466969 MT2AP02795 61 aa6.69□□□□□ -1.34
UBR4-210ENST00000466969 KRTAP2-3P0C7H8 128 aa6.69□□□□□ -1.34
UBR4-210ENST00000466969 RPL7L1Q6DKI1 246 aaKnown RBP6.69□□□□□ -1.34
UBR4-210ENST00000466969 KRTAP9-3Q9BYQ3 159 aa6.69□□□□□ -1.34
UBR4-210ENST00000466969 KRTAP2-4Q9BYR9 128 aa6.69□□□□□ -1.34
UBR4-210ENST00000466969 SCO2A0A1W2PP80 73 aa6.68□□□□□ -1.34
UBR4-210ENST00000466969 XKRY2A2RUG3 117 aa6.68□□□□□ -1.34
UBR4-210ENST00000466969 PAGE4O60829 102 aa6.68□□□□□ -1.34
UBR4-210ENST00000466969 LINC00469Q8N7U9 141 aa6.68□□□□□ -1.34
UBR4-210ENST00000466969 LINC00167Q96N53 147 aa6.68□□□□□ -1.34
UBR4-210ENST00000466969 TMA7Q9Y2S6 64 aaKnown RBP6.68□□□□□ -1.34
UBR4-210ENST00000466969 SDHAF1A6NFY7 115 aa6.67□□□□□ -1.34
UBR4-210ENST00000466969 I3L3M4 83 aa6.67□□□□□ -1.34
UBR4-210ENST00000466969 RNASE13Q5GAN3 156 aaKnown RBP6.67□□□□□ -1.34
UBR4-210ENST00000466969 GATD1Q8NB37 220 aa6.67□□□□□ -1.34
UBR4-210ENST00000466969 S100ZQ8WXG8 99 aa6.67□□□□□ -1.34
UBR4-210ENST00000466969 PLEKHB2Q96CS7 222 aa6.67□□□□□ -1.34
UBR4-210ENST00000466969 XAGE1AQ9HD64 81 aa6.67□□□□□ -1.34
UBR4-210ENST00000466969 ZNF727A8MUV8 499 aa6.66□□□□□ -1.34
UBR4-210ENST00000466969 UPK1BO75841 260 aa6.66□□□□□ -1.34
UBR4-210ENST00000466969 RPS29P62273 56 aaKnown RBP6.66□□□□□ -1.34
UBR4-210ENST00000466969 PRLHP81277 87 aa6.66□□□□□ -1.34
UBR4-210ENST00000466969 RPL39LQ96EH5 51 aaKnown RBP6.66□□□□□ -1.34
UBR4-210ENST00000466969 MDN1Q9NU22 5596 aa6.66□□□□□ -1.34
UBR4-210ENST00000466969 C9orf92A6NGG3 77 aa6.65□□□□□ -1.34
UBR4-210ENST00000466969 GAGE10A6NGK3 116 aa6.65□□□□□ -1.34
UBR4-210ENST00000466969 LINC00299Q6ZSB3 139 aa6.65□□□□□ -1.34
UBR4-210ENST00000466969 hCG_2014768A0A024R1R8 64 aa6.64□□□□□ -1.35
UBR4-210ENST00000466969 IFNA1P01562 189 aa6.64□□□□□ -1.35
UBR4-210ENST00000466969 RPL35P42766 123 aaKnown RBP6.64□□□□□ -1.35
UBR4-210ENST00000466969 FOXA3P55318 350 aaPredicted RBP6.64□□□□□ -1.35
UBR4-210ENST00000466969 PNRC1Q12796 327 aaPredicted RBP6.64□□□□□ -1.35
UBR4-210ENST00000466969 TEX261Q6UWH6 196 aa6.64□□□□□ -1.35
UBR4-210ENST00000466969 TMUB2Q71RG4 321 aa6.64□□□□□ -1.35
UBR4-210ENST00000466969 MT1FP04733 61 aa6.63□□□□□ -1.35
UBR4-210ENST00000466969 DEFA1P59665 94 aa6.63□□□□□ -1.35
UBR4-210ENST00000466969 KRTAP10-10P60014 251 aa6.63□□□□□ -1.35
UBR4-210ENST00000466969 TWIST1Q15672 202 aa6.63□□□□□ -1.35
UBR4-210ENST00000466969 C2orf82Q6UX34 121 aa6.63□□□□□ -1.35
UBR4-210ENST00000466969 FAM19A1Q7Z5A9 133 aa6.63□□□□□ -1.35
UBR4-210ENST00000466969 GPR98Q8WXG9 6306 aa6.63□□□□□ -1.35
UBR4-210ENST00000466969 C7orf77A4D0Y5 90 aa6.62□□□□□ -1.35
UBR4-210ENST00000466969 SMAGPQ0VAQ4 97 aa6.62□□□□□ -1.35
UBR4-210ENST00000466969 SMIM15Q7Z3B0 74 aa6.62□□□□□ -1.35
UBR4-210ENST00000466969 TMEM242Q9NWH2 141 aa6.62□□□□□ -1.35
UBR4-210ENST00000466969 IGHV3OR16-9A0A0B4J2B5 98 aa6.61□□□□□ -1.35
UBR4-210ENST00000466969 RPL32P62910 135 aaKnown RBP6.61□□□□□ -1.35
UBR4-210ENST00000466969 KIAA0087Q14695 138 aa6.61□□□□□ -1.35
UBR4-210ENST00000466969 CENPWQ5EE01 88 aa6.61□□□□□ -1.35
UBR4-210ENST00000466969 SFT2D1Q8WV19 159 aa6.61□□□□□ -1.35
UBR4-210ENST00000466969 GNB1LQ9BYB4 327 aa6.61□□□□□ -1.35
UBR4-210ENST00000466969 FXYD6-FXYD2A0A087WZ82 144 aa6.6□□□□□ -1.35
UBR4-210ENST00000466969 CBLN2Q8IUK8 224 aa6.6□□□□□ -1.35
UBR4-210ENST00000466969 C9orf62Q8N4C0 152 aa6.6□□□□□ -1.35
UBR4-210ENST00000466969 KCNRGQ8N5I3 272 aa6.6□□□□□ -1.35
UBR4-210ENST00000466969 SMIM12Q96EX1 92 aa6.6□□□□□ -1.35
UBR4-210ENST00000466969 CNFNQ9BYD5 112 aa6.6□□□□□ -1.35
UBR4-210ENST00000466969 BIN3Q9NQY0 253 aa6.6□□□□□ -1.35
UBR4-210ENST00000466969 CSDC2Q9Y534 153 aaKnown RBP6.6□□□□□ -1.35
UBR4-210ENST00000466969 A0A1B0GV50 99 aa6.59□□□□□ -1.35
UBR4-210ENST00000466969 LGALS3P17931 250 aaKnown RBP6.59□□□□□ -1.35
UBR4-210ENST00000466969 IFITM3Q01628 133 aa6.59□□□□□ -1.35
UBR4-210ENST00000466969 TRBV6-5A0A0K0K1A5 114 aa6.58□□□□□ -1.36
UBR4-210ENST00000466969 GIPP09681 153 aaPredicted RBP6.58□□□□□ -1.36
UBR4-210ENST00000466969 GNG4P50150 75 aa6.58□□□□□ -1.36
UBR4-210ENST00000466969 FAM213BQ8TBF2 198 aa6.58□□□□□ -1.36
UBR4-210ENST00000466969 MBD3L1Q8WWY6 194 aa6.58□□□□□ -1.36
UBR4-210ENST00000466969 C11orf52Q96A22 123 aa6.58□□□□□ -1.36
UBR4-210ENST00000466969 SPRR4Q96PI1 79 aa6.58□□□□□ -1.36
UBR4-210ENST00000466969 IGKV2-28A0A075B6P5 120 aa6.57□□□□□ -1.36
UBR4-210ENST00000466969 RAB19A4D1S5 217 aa6.57□□□□□ -1.36
UBR4-210ENST00000466969 IGKV2D-28P01615 120 aa6.57□□□□□ -1.36
UBR4-210ENST00000466969 Q5BKY6 102 aa6.57□□□□□ -1.36
UBR4-210ENST00000466969 Q6ZUT4 128 aa6.57□□□□□ -1.36
UBR4-210ENST00000466969 HIGD2AQ9BW72 106 aa6.57□□□□□ -1.36
UBR4-210ENST00000466969 ST20Q9HBF5 79 aa6.57□□□□□ -1.36
UBR4-210ENST00000466969 UMAD1C9J7I0 102 aa6.56□□□□□ -1.36
UBR4-210ENST00000466969 CCL20P78556 96 aa6.56□□□□□ -1.36
UBR4-210ENST00000466969 RNASE7Q9H1E1 156 aaKnown RBP6.56□□□□□ -1.36
UBR4-210ENST00000466969 MANBALQ9NQG1 85 aa6.56□□□□□ -1.36
UBR4-210ENST00000466969 ZNF706Q9Y5V0 76 aaPredicted RBP6.56□□□□□ -1.36
UBR4-210ENST00000466969 S100A1P23297 94 aa6.55□□□□□ -1.36
UBR4-210ENST00000466969 NKAPP1Q8N9T2 125 aa6.55□□□□□ -1.36
UBR4-210ENST00000466969 TGIF2-C20orf24A0A0A6YYL0 155 aa6.54□□□□□ -1.36
UBR4-210ENST00000466969 GEMIN7Q9H840 131 aaKnown RBP6.54□□□□□ -1.36
UBR4-210ENST00000466969 IGLV6-57P01721 117 aa6.53□□□□□ -1.36
UBR4-210ENST00000466969 H2AFB1P0C5Y9 115 aa6.53□□□□□ -1.36
UBR4-210ENST00000466969 FCER1GP30273 86 aa6.53□□□□□ -1.36
UBR4-210ENST00000466969 NUDT10Q8NFP7 164 aa6.53□□□□□ -1.36
UBR4-210ENST00000466969 NUDT11Q96G61 164 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms