RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 PRYO14603 147 aa6.37□□□□□ -1.39
HPS4-209ENST00000466781 RNF185Q96GF1 192 aa6.37□□□□□ -1.39
HPS4-209ENST00000466781 ESRGQ1W209 222 aa6.37□□□□□ -1.39
HPS4-209ENST00000466781 REG3GQ6UW15 175 aa6.37□□□□□ -1.39
HPS4-209ENST00000466781 ZNF295-AS1Q8N0V1 137 aa6.37□□□□□ -1.39
HPS4-209ENST00000466781 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.37□□□□□ -1.39
HPS4-209ENST00000466781 MRPS36P82909 103 aaKnown RBP6.37□□□□□ -1.39
HPS4-209ENST00000466781 U3KQK5 164 aa6.37□□□□□ -1.39
HPS4-209ENST00000466781 SERP2Q8N6R1 65 aa6.36□□□□□ -1.39
HPS4-209ENST00000466781 MUC7Q8TAX7 377 aa6.36□□□□□ -1.39
HPS4-209ENST00000466781 SNURFQ9Y675 71 aa6.36□□□□□ -1.39
HPS4-209ENST00000466781 TRBV27A0A0K0K1C4 114 aa6.36□□□□□ -1.39
HPS4-209ENST00000466781 A8MZ25 164 aa6.36□□□□□ -1.39
HPS4-209ENST00000466781 SMIM11BQ8TCY0 68 aa6.36□□□□□ -1.39
HPS4-209ENST00000466781 MUC6Q6W4X9 2439 aa6.36□□□□□ -1.39
HPS4-209ENST00000466781 Q8IZM0 81 aa6.36□□□□□ -1.39
HPS4-209ENST00000466781 ZFHX2Q9C0A1 2572 aaPredicted RBP6.36□□□□□ -1.39
HPS4-209ENST00000466781 X6R8D5 127 aa6.36□□□□□ -1.39
HPS4-209ENST00000466781 VCANP13611 3396 aa6.35□□□□□ -1.39
HPS4-209ENST00000466781 RANBP2P49792 3224 aaKnown RBP6.35□□□□□ -1.39
HPS4-209ENST00000466781 CRIP1P50238 77 aa6.35□□□□□ -1.39
HPS4-209ENST00000466781 MALRD1Q5VYJ5 2156 aa6.35□□□□□ -1.39
HPS4-209ENST00000466781 PKDREJQ9NTG1 2253 aa6.35□□□□□ -1.39
HPS4-209ENST00000466781 LST1O00453 97 aa6.35□□□□□ -1.39
HPS4-209ENST00000466781 MT-ATP8P03928 68 aa6.35□□□□□ -1.39
HPS4-209ENST00000466781 C5orf42Q9H799 3197 aa6.35□□□□□ -1.39
HPS4-209ENST00000466781 IGLV1-40P01703 118 aa6.35□□□□□ -1.39
HPS4-209ENST00000466781 C1orf134Q5TEV5 83 aa6.34□□□□□ -1.39
HPS4-209ENST00000466781 RNASE8Q8TDE3 154 aaKnown RBP6.34□□□□□ -1.39
HPS4-209ENST00000466781 WNK2Q9Y3S1 2297 aa6.34□□□□□ -1.39
HPS4-209ENST00000466781 CYSRT1A8MQ03 144 aa6.34□□□□□ -1.39
HPS4-209ENST00000466781 RNASE3P12724 160 aaKnown RBP6.34□□□□□ -1.39
HPS4-209ENST00000466781 EIF4EBP1Q13541 118 aaPredicted RBP6.34□□□□□ -1.39
HPS4-209ENST00000466781 A0A0U1RQV1 116 aa6.34□□□□□ -1.39
HPS4-209ENST00000466781 PRR4Q16378 134 aa6.34□□□□□ -1.39
HPS4-209ENST00000466781 C1orf137Q5JT78 98 aa6.34□□□□□ -1.39
HPS4-209ENST00000466781 MAPKAPK5-AS1Q8N8E1 139 aa6.34□□□□□ -1.39
HPS4-209ENST00000466781 RETNLBQ9BQ08 111 aa6.34□□□□□ -1.39
HPS4-209ENST00000466781 C16orf95Q9H693 158 aa6.34□□□□□ -1.39
HPS4-209ENST00000466781 Q8N6K4 173 aa6.34□□□□□ -1.39
HPS4-209ENST00000466781 LINC01556Q5JQF7 62 aa6.34□□□□□ -1.4
HPS4-209ENST00000466781 EML5Q05BV3 1969 aa6.33□□□□□ -1.4
HPS4-209ENST00000466781 MED13Q9UHV7 2174 aa6.33□□□□□ -1.4
HPS4-209ENST00000466781 PCNX3Q9H6A9 2034 aa6.33□□□□□ -1.4
HPS4-209ENST00000466781 AVPP01185 164 aa6.33□□□□□ -1.4
HPS4-209ENST00000466781 IGHV6-1A0A0B4J1U7 121 aa6.33□□□□□ -1.4
HPS4-209ENST00000466781 ATG2AQ2TAZ0 1938 aa6.33□□□□□ -1.4
HPS4-209ENST00000466781 TNRC18O15417 2968 aaPredicted RBP6.33□□□□□ -1.4
HPS4-209ENST00000466781 KLLNB2CW77 178 aa6.33□□□□□ -1.4
HPS4-209ENST00000466781 MRPS12O15235 138 aaKnown RBP6.33□□□□□ -1.4
HPS4-209ENST00000466781 IGLV2-11P01706 119 aa6.33□□□□□ -1.4
HPS4-209ENST00000466781 C6orf223Q8N319 242 aa6.33□□□□□ -1.4
HPS4-209ENST00000466781 PRR9Q5T870 116 aa6.32□□□□□ -1.4
HPS4-209ENST00000466781 PRM2P04554 102 aa6.32□□□□□ -1.4
HPS4-209ENST00000466781 BRI3O95415 125 aa6.32□□□□□ -1.4
HPS4-209ENST00000466781 EDN2P20800 178 aa6.32□□□□□ -1.4
HPS4-209ENST00000466781 EGFEM1PQ0D2K5 195 aa6.32□□□□□ -1.4
HPS4-209ENST00000466781 CHCHD7Q9BUK0 85 aa6.32□□□□□ -1.4
HPS4-209ENST00000466781 CPAMD8Q8IZJ3 1885 aa6.31□□□□□ -1.4
HPS4-209ENST00000466781 NRACQ8N912 160 aa6.31□□□□□ -1.4
HPS4-209ENST00000466781 DSCAMO60469 2012 aa6.31□□□□□ -1.4
HPS4-209ENST00000466781 CDC42SE2Q9NRR3 84 aa6.31□□□□□ -1.4
HPS4-209ENST00000466781 RAI1Q7Z5J4 1906 aaPredicted RBP6.31□□□□□ -1.4
HPS4-209ENST00000466781 MED12LQ86YW9 2145 aa6.3□□□□□ -1.4
HPS4-209ENST00000466781 LIMD2Q9BT23 127 aa6.3□□□□□ -1.4
HPS4-209ENST00000466781 Q6JHZ5 121 aa6.29□□□□□ -1.4
HPS4-209ENST00000466781 Q9BRP9 147 aa6.29□□□□□ -1.4
HPS4-209ENST00000466781 Q6ZTC4 211 aa6.29□□□□□ -1.4
HPS4-209ENST00000466781 UNQ6190/PRO20217Q6UXQ8 127 aa6.29□□□□□ -1.4
HPS4-209ENST00000466781 NOTCH3Q9UM47 2321 aa6.29□□□□□ -1.4
HPS4-209ENST00000466781 SPEGQ15772 3267 aa6.29□□□□□ -1.4
HPS4-209ENST00000466781 RIF1Q5UIP0 2472 aaKnown RBP6.29□□□□□ -1.4
HPS4-209ENST00000466781 TP73-AS1Q9UF72 201 aa6.28□□□□□ -1.4
HPS4-209ENST00000466781 TRBV7-6A0A0J9YX20 115 aa6.28□□□□□ -1.4
HPS4-209ENST00000466781 CELA1Q9UNI1 258 aa6.28□□□□□ -1.4
HPS4-209ENST00000466781 A0A1W2PPR1 153 aa6.28□□□□□ -1.4
HPS4-209ENST00000466781 F8WDY8 70 aa6.28□□□□□ -1.4
HPS4-209ENST00000466781 LINC00337Q8N6G1 96 aa6.28□□□□□ -1.4
HPS4-209ENST00000466781 IMUPQ9GZP8 106 aa6.27□□□□□ -1.41
HPS4-209ENST00000466781 KIAA1549Q9HCM3 1950 aa6.27□□□□□ -1.41
HPS4-209ENST00000466781 TRBV10-3A0A0K0K1G6 114 aa6.27□□□□□ -1.41
HPS4-209ENST00000466781 CHD7Q9P2D1 2997 aa6.27□□□□□ -1.41
HPS4-209ENST00000466781 CREBBPQ92793 2442 aa6.27□□□□□ -1.41
HPS4-209ENST00000466781 NHLRC4P0CG21 123 aaPredicted RBP6.27□□□□□ -1.41
HPS4-209ENST00000466781 C11orf21Q9P2W6 132 aa6.27□□□□□ -1.41
HPS4-209ENST00000466781 IGLV1-51P01701 117 aa6.27□□□□□ -1.41
HPS4-209ENST00000466781 POLR2KP53803 58 aaKnown RBP6.27□□□□□ -1.41
HPS4-209ENST00000466781 SPINK1P00995 79 aa6.26□□□□□ -1.41
HPS4-209ENST00000466781 C9orf116Q5BN46 136 aaPredicted RBP6.26□□□□□ -1.41
HPS4-209ENST00000466781 ODF3L2Q3SX64 289 aa6.26□□□□□ -1.41
HPS4-209ENST00000466781 NTM-AS1Q6ZSK4 140 aa6.26□□□□□ -1.41
HPS4-209ENST00000466781 LINC00208Q96KT6 92 aa6.26□□□□□ -1.41
HPS4-209ENST00000466781 C2orf48Q96LS8 159 aa6.26□□□□□ -1.41
HPS4-209ENST00000466781 POM121L12Q8N7R1 296 aa6.26□□□□□ -1.41
HPS4-209ENST00000466781 Q8N814 137 aa6.26□□□□□ -1.41
HPS4-209ENST00000466781 NCOA6Q14686 2063 aaPredicted RBP6.25□□□□□ -1.41
HPS4-209ENST00000466781 ROS1P08922 2347 aa6.25□□□□□ -1.41
HPS4-209ENST00000466781 FHL2Q14192 279 aa6.24□□□□□ -1.41
HPS4-209ENST00000466781 COX7CP15954 63 aa6.24□□□□□ -1.41
HPS4-209ENST00000466781 FREM1Q5H8C1 2179 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms