RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 C10orf113Q5VZT2 155 aa-0.1□□□□□ -2.43
CCDC93-205ENST00000466171 TMEM263Q8WUH6 116 aaKnown RBP-0.1□□□□□ -2.43
CCDC93-205ENST00000466171 CDC42SE2Q9NRR3 84 aa-0.1□□□□□ -2.43
CCDC93-205ENST00000466171 CACNA1AO00555 2505 aa-0.1□□□□□ -2.43
CCDC93-205ENST00000466171 AKAP6Q13023 2319 aa-0.1□□□□□ -2.43
CCDC93-205ENST00000466171 DSTQ03001 7570 aaKnown RBP-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 TET3O43151 1660 aa-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 BSNQ9UPA5 3926 aa-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 C2CD3Q4AC94 2353 aa-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 HSPG2P98160 4391 aa-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 EHBP1L1Q8N3D4 1523 aa-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 TOP2BQ02880 1626 aa-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 NAP1L6A6NFF2 107 aa-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 CORTO00230 105 aa-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 PRM1P04553 51 aa-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 SNCAP37840 140 aa-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 WHAMMP3Q1A5X7 153 aa-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 FAM167A-AS1Q96KT0 104 aa-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 IER3IP1Q9Y5U9 82 aa-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 PKDREJQ9NTG1 2253 aa-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 TCHHQ07283 1943 aa-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 NRKQ7Z2Y5 1582 aa-0.11□□□□□ -2.43
CCDC93-205ENST00000466171 NCOR1O75376 2440 aa-0.12□□□□□ -2.43
CCDC93-205ENST00000466171 HMGXB3Q12766 1538 aa-0.12□□□□□ -2.43
CCDC93-205ENST00000466171 DOPEY2Q9Y3R5 2298 aa-0.12□□□□□ -2.43
CCDC93-205ENST00000466171 TSC2P49815 1807 aa-0.12□□□□□ -2.43
CCDC93-205ENST00000466171 TRBV7-4A0A0J9YYF1 115 aa-0.12□□□□□ -2.43
CCDC93-205ENST00000466171 CRYM-AS1A6NIL9 109 aa-0.12□□□□□ -2.43
CCDC93-205ENST00000466171 FAM223BA6NKX1 122 aa-0.12□□□□□ -2.43
CCDC93-205ENST00000466171 LOC730098B7Z3J9 87 aa-0.12□□□□□ -2.43
CCDC93-205ENST00000466171 COX6CP09669 75 aa-0.12□□□□□ -2.43
CCDC93-205ENST00000466171 SPRR1BP22528 89 aa-0.12□□□□□ -2.43
CCDC93-205ENST00000466171 LINC01600Q96MT4 127 aa-0.12□□□□□ -2.43
CCDC93-205ENST00000466171 C12orf57Q99622 126 aa-0.12□□□□□ -2.43
CCDC93-205ENST00000466171 C2orf88Q9BSF0 95 aa-0.12□□□□□ -2.43
CCDC93-205ENST00000466171 PRO1933Q9H354 126 aa-0.12□□□□□ -2.43
CCDC93-205ENST00000466171 PLCE1Q9P212 2302 aa-0.12□□□□□ -2.43
CCDC93-205ENST00000466171 SCN7AQ01118 1682 aa-0.12□□□□□ -2.43
CCDC93-205ENST00000466171 USF3Q68DE3 2245 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 FLNCQ14315 2725 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 ALMS1Q8TCU4 4167 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 PZPP20742 1482 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 GAPVD1Q14C86 1478 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 MAGI1Q96QZ7 1491 aaPredicted RBP-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 FAT2Q9NYQ8 4349 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 A0A1B0GWA3 101 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 LINC00587B1AMM8 73 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 SPRR2DP22532 72 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 UBE2D3P61077 147 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 UBE2D2P62837 147 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 MRPS10P82664 201 aaKnown RBP-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 GTF2H5Q6ZYL4 71 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 LCN9Q8WX39 176 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 TMEM203Q969S6 136 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 SPRR4Q96PI1 79 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 PRO1854Q9UHT4 67 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 MYO7BQ6PIF6 2116 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 CC2D2AQ9P2K1 1620 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 NSD1Q96L73 2696 aaPredicted RBP-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 ARHGAP5Q13017 1502 aa-0.13□□□□□ -2.43
CCDC93-205ENST00000466171 PTPN13Q12923 2485 aa-0.14□□□□□ -2.43
CCDC93-205ENST00000466171 LINC00959A0A1B0GUT2 108 aa-0.14□□□□□ -2.43
CCDC93-205ENST00000466171 SYS1-DBNDD2H3BUS1 97 aa-0.14□□□□□ -2.43
CCDC93-205ENST00000466171 DEFB123Q8N688 67 aa-0.14□□□□□ -2.43
CCDC93-205ENST00000466171 LRP2P98164 4655 aa-0.14□□□□□ -2.43
CCDC93-205ENST00000466171 TNXBP22105 4242 aa-0.14□□□□□ -2.43
CCDC93-205ENST00000466171 TENM4Q6N022 2769 aa-0.14□□□□□ -2.43
CCDC93-205ENST00000466171 ZFHX3Q15911 3703 aa-0.14□□□□□ -2.43
CCDC93-205ENST00000466171 ADGRL2O95490 1459 aa-0.15□□□□□ -2.43
CCDC93-205ENST00000466171 C1orf167Q5SNV9 1468 aa-0.15□□□□□ -2.43
CCDC93-205ENST00000466171 KRTDAPP60985 99 aa-0.15□□□□□ -2.43
CCDC93-205ENST00000466171 TULP4Q9NRJ4 1543 aa-0.15□□□□□ -2.43
CCDC93-205ENST00000466171 DIP2CQ9Y2E4 1556 aa-0.15□□□□□ -2.43
CCDC93-205ENST00000466171 NLRP1Q9C000 1473 aa-0.16□□□□□ -2.43
CCDC93-205ENST00000466171 MAPKBP1O60336 1514 aa-0.16□□□□□ -2.43
CCDC93-205ENST00000466171 A0A087WVE0 104 aa-0.16□□□□□ -2.44
CCDC93-205ENST00000466171 hADV29S1A0JD25 119 aa-0.16□□□□□ -2.44
CCDC93-205ENST00000466171 SEC11AP67812 179 aa-0.16□□□□□ -2.44
CCDC93-205ENST00000466171 KLK9Q2XQG4 91 aa-0.16□□□□□ -2.44
CCDC93-205ENST00000466171 SETBP1Q9Y6X0 1596 aa-0.16□□□□□ -2.44
CCDC93-205ENST00000466171 SPHKAPQ2M3C7 1700 aa-0.16□□□□□ -2.44
CCDC93-205ENST00000466171 VWFP04275 2813 aa-0.17□□□□□ -2.44
CCDC93-205ENST00000466171 C20orf202A1L168 122 aa-0.17□□□□□ -2.44
CCDC93-205ENST00000466171 H3BQ15 152 aa-0.17□□□□□ -2.44
CCDC93-205ENST00000466171 SPINK4O60575 86 aa-0.17□□□□□ -2.44
CCDC93-205ENST00000466171 SAA2P0DJI9 122 aaPredicted RBP-0.17□□□□□ -2.44
CCDC93-205ENST00000466171 NUP188Q5SRE5 1749 aa-0.17□□□□□ -2.44
CCDC93-205ENST00000466171 DEFB105AQ8NG35 78 aa-0.17□□□□□ -2.44
CCDC93-205ENST00000466171 KIAA0556O60303 1618 aa-0.17□□□□□ -2.44
CCDC93-205ENST00000466171 TOPAZ1Q8N9V7 1692 aa-0.18□□□□□ -2.44
CCDC93-205ENST00000466171 FAM135AQ9P2D6 1515 aa-0.18□□□□□ -2.44
CCDC93-205ENST00000466171 HECTD4Q9Y4D8 3996 aa-0.18□□□□□ -2.44
CCDC93-205ENST00000466171 CHD6Q8TD26 2715 aa-0.18□□□□□ -2.44
CCDC93-205ENST00000466171 A0A0G2JND7 137 aa-0.18□□□□□ -2.44
CCDC93-205ENST00000466171 TMEM262E9PQX1 116 aa-0.18□□□□□ -2.44
CCDC93-205ENST00000466171 COX8AP10176 69 aa-0.18□□□□□ -2.44
CCDC93-205ENST00000466171 ASIPP42127 132 aa-0.18□□□□□ -2.44
CCDC93-205ENST00000466171 HSD52Q0P140 79 aa-0.18□□□□□ -2.44
CCDC93-205ENST00000466171 KRTAP6-1Q3LI64 71 aa-0.18□□□□□ -2.44
CCDC93-205ENST00000466171 USMG5Q96IX5 58 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms