RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 TRGC2P03986 189 aa8.01□□□□□ -1.13
CHPF2-202ENST00000465601 NPSP0C0P6 89 aa8.01□□□□□ -1.13
CHPF2-202ENST00000465601 MALP21145 153 aa8.01□□□□□ -1.13
CHPF2-202ENST00000465601 CNBPP62633 177 aaKnown RBP8.01□□□□□ -1.13
CHPF2-202ENST00000465601 ERASQ7Z444 233 aa8.01□□□□□ -1.13
CHPF2-202ENST00000465601 C9orf163Q8N9P6 203 aa8.01□□□□□ -1.13
CHPF2-202ENST00000465601 TIMM17AQ99595 171 aa8.01□□□□□ -1.13
CHPF2-202ENST00000465601 C2orf88Q9BSF0 95 aa8.01□□□□□ -1.13
CHPF2-202ENST00000465601 FAT1Q14517 4588 aa8□□□□□ -1.13
CHPF2-202ENST00000465601 IGHV3OR16-9A0A0B4J2B5 98 aa8□□□□□ -1.13
CHPF2-202ENST00000465601 UBE2D1P51668 147 aa8□□□□□ -1.13
CHPF2-202ENST00000465601 COX6A2Q02221 97 aa8□□□□□ -1.13
CHPF2-202ENST00000465601 LINC00242Q5T6M2 205 aa8□□□□□ -1.13
CHPF2-202ENST00000465601 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.99□□□□□ -1.13
CHPF2-202ENST00000465601 RAB5BP61020 215 aa7.99□□□□□ -1.13
CHPF2-202ENST00000465601 PMCHL1Q16048 86 aa7.99□□□□□ -1.13
CHPF2-202ENST00000465601 PAPPA-AS1Q5QFB9 102 aa7.99□□□□□ -1.13
CHPF2-202ENST00000465601 KRTAP17-1Q9BYP8 105 aa7.99□□□□□ -1.13
CHPF2-202ENST00000465601 A0A096LNJ9 63 aa7.98□□□□□ -1.13
CHPF2-202ENST00000465601 LINC01549A6NIU2 74 aa7.98□□□□□ -1.13
CHPF2-202ENST00000465601 ZNF561-AS1K7EIQ3 104 aa7.98□□□□□ -1.13
CHPF2-202ENST00000465601 APOMO95445 188 aa7.98□□□□□ -1.13
CHPF2-202ENST00000465601 Q6ZSA8 131 aa7.98□□□□□ -1.13
CHPF2-202ENST00000465601 IGHV3-64A0A075B6Q5 118 aa7.97□□□□□ -1.13
CHPF2-202ENST00000465601 SDIM1Q6ZPB5 146 aa7.97□□□□□ -1.13
CHPF2-202ENST00000465601 IGLV4-69A0A075B6H9 119 aa7.96□□□□□ -1.14
CHPF2-202ENST00000465601 A0A087WZ39 114 aa7.96□□□□□ -1.14
CHPF2-202ENST00000465601 HBDP02042 147 aa7.96□□□□□ -1.14
CHPF2-202ENST00000465601 ORAOV1Q8WV07 137 aa7.96□□□□□ -1.14
CHPF2-202ENST00000465601 A0A0J9YXV3 536 aa7.95□□□□□ -1.14
CHPF2-202ENST00000465601 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.95□□□□□ -1.14
CHPF2-202ENST00000465601 SMR3BP02814 79 aaPredicted RBP7.95□□□□□ -1.14
CHPF2-202ENST00000465601 SPAG11BQ08648 103 aa7.95□□□□□ -1.14
CHPF2-202ENST00000465601 SYCNQ0VAF6 134 aa7.95□□□□□ -1.14
CHPF2-202ENST00000465601 FAM19A3Q7Z5A8 133 aa7.95□□□□□ -1.14
CHPF2-202ENST00000465601 BAGE3Q86Y29 109 aa7.95□□□□□ -1.14
CHPF2-202ENST00000465601 CHCHD1Q96BP2 118 aaKnown RBP7.95□□□□□ -1.14
CHPF2-202ENST00000465601 CST9LQ9H4G1 147 aa7.95□□□□□ -1.14
CHPF2-202ENST00000465601 NDUFA6P56556 154 aa7.94□□□□□ -1.14
CHPF2-202ENST00000465601 PMVKQ15126 192 aa7.94□□□□□ -1.14
CHPF2-202ENST00000465601 PDZD11Q5EBL8 140 aa7.94□□□□□ -1.14
CHPF2-202ENST00000465601 SCXQ7RTU7 201 aa7.94□□□□□ -1.14
CHPF2-202ENST00000465601 Q8N1X5 172 aa7.94□□□□□ -1.14
CHPF2-202ENST00000465601 OR10D4PQ8NGN7 298 aa7.94□□□□□ -1.14
CHPF2-202ENST00000465601 CARD19Q96LW7 228 aa7.94□□□□□ -1.14
CHPF2-202ENST00000465601 CHAC1Q9BUX1 264 aa7.94□□□□□ -1.14
CHPF2-202ENST00000465601 GEMIN7Q9H840 131 aaKnown RBP7.94□□□□□ -1.14
CHPF2-202ENST00000465601 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
CHPF2-202ENST00000465601 PANO1I0J062 215 aa7.93□□□□□ -1.14
CHPF2-202ENST00000465601 HERVK_113P63121 156 aa7.93□□□□□ -1.14
CHPF2-202ENST00000465601 SEC11AP67812 179 aa7.93□□□□□ -1.14
CHPF2-202ENST00000465601 Q6ZRU5 148 aa7.93□□□□□ -1.14
CHPF2-202ENST00000465601 C2orf48Q96LS8 159 aa7.93□□□□□ -1.14
CHPF2-202ENST00000465601 CAMK2N2Q96S95 79 aa7.93□□□□□ -1.14
CHPF2-202ENST00000465601 KRTAP4-5Q9BYR2 181 aa7.93□□□□□ -1.14
CHPF2-202ENST00000465601 CDKN2A-AS1Q9UH64 79 aa7.93□□□□□ -1.14
CHPF2-202ENST00000465601 CHTF8P0CG12 524 aa7.92□□□□□ -1.14
CHPF2-202ENST00000465601 LINC01561Q8N1V8 128 aa7.92□□□□□ -1.14
CHPF2-202ENST00000465601 CIRBP-AS1Q8TBR5 109 aa7.92□□□□□ -1.14
CHPF2-202ENST00000465601 DPH3Q96FX2 82 aa7.92□□□□□ -1.14
CHPF2-202ENST00000465601 VPS13BQ7Z7G8 4022 aa7.91□□□□□ -1.14
CHPF2-202ENST00000465601 TINCRA0A1B0GVN0 87 aa7.91□□□□□ -1.14
CHPF2-202ENST00000465601 HSBP1O75506 76 aa7.91□□□□□ -1.14
CHPF2-202ENST00000465601 ATP5LO75964 103 aa7.91□□□□□ -1.14
CHPF2-202ENST00000465601 KIAA0087Q14695 138 aa7.91□□□□□ -1.14
CHPF2-202ENST00000465601 FAM19A2Q8N3H0 131 aa7.91□□□□□ -1.14
CHPF2-202ENST00000465601 LINC00469Q8N7U9 141 aa7.91□□□□□ -1.14
CHPF2-202ENST00000465601 IGKV2-24A0A0C4DH68 120 aa7.9□□□□□ -1.14
CHPF2-202ENST00000465601 SERF1AO75920 110 aa7.9□□□□□ -1.14
CHPF2-202ENST00000465601 LINC00310P59036 64 aa7.9□□□□□ -1.14
CHPF2-202ENST00000465601 C10orf25Q5T742 122 aa7.9□□□□□ -1.14
CHPF2-202ENST00000465601 UNQ6190/PRO20217Q6UXQ8 127 aa7.9□□□□□ -1.14
CHPF2-202ENST00000465601 ABCA13Q86UQ4 5058 aa7.9□□□□□ -1.14
CHPF2-202ENST00000465601 SRRM2Q9UQ35 2752 aaKnown RBP7.9□□□□□ -1.15
CHPF2-202ENST00000465601 NDUFA1O15239 70 aa7.89□□□□□ -1.15
CHPF2-202ENST00000465601 NUPR1O60356 82 aa7.89□□□□□ -1.15
CHPF2-202ENST00000465601 ATP6V1G1O75348 118 aa7.89□□□□□ -1.15
CHPF2-202ENST00000465601 S100A1P23297 94 aa7.89□□□□□ -1.15
CHPF2-202ENST00000465601 CIRBPQ14011 172 aaKnown RBP7.89□□□□□ -1.15
CHPF2-202ENST00000465601 PACRGQ96M98 296 aaPredicted RBP7.89□□□□□ -1.15
CHPF2-202ENST00000465601 TOMM7Q9P0U1 55 aa7.89□□□□□ -1.15
CHPF2-202ENST00000465601 A0A096LNI7 61 aa7.88□□□□□ -1.15
CHPF2-202ENST00000465601 EPM2AB3EWF7 344 aa7.88□□□□□ -1.15
CHPF2-202ENST00000465601 F8WDY8 70 aa7.88□□□□□ -1.15
CHPF2-202ENST00000465601 PRSS2P07478 247 aa7.88□□□□□ -1.15
CHPF2-202ENST00000465601 MAJINQ3KP22 176 aa7.88□□□□□ -1.15
CHPF2-202ENST00000465601 C2orf82Q6UX34 121 aa7.88□□□□□ -1.15
CHPF2-202ENST00000465601 SPACA4Q8TDM5 124 aa7.88□□□□□ -1.15
CHPF2-202ENST00000465601 IFI27L1Q96BM0 104 aa7.88□□□□□ -1.15
CHPF2-202ENST00000465601 IGLV5-45A0A087WSX0 123 aa7.87□□□□□ -1.15
CHPF2-202ENST00000465601 A0A087WYN8 130 aa7.87□□□□□ -1.15
CHPF2-202ENST00000465601 LOC107984640A0A0U1RRK4 108 aa7.87□□□□□ -1.15
CHPF2-202ENST00000465601 FAM229AH3BQW9 127 aa7.87□□□□□ -1.15
CHPF2-202ENST00000465601 IGLC3P0DOY3 106 aa7.87□□□□□ -1.15
CHPF2-202ENST00000465601 GAGE2BQ13066 116 aa7.87□□□□□ -1.15
CHPF2-202ENST00000465601 RNF151Q2KHN1 245 aa7.87□□□□□ -1.15
CHPF2-202ENST00000465601 C6orf226Q5I0X4 101 aa7.87□□□□□ -1.15
CHPF2-202ENST00000465601 Q5VSD8 79 aa7.87□□□□□ -1.15
CHPF2-202ENST00000465601 MRPL35Q9NZE8 188 aaKnown RBP7.87□□□□□ -1.15
CHPF2-202ENST00000465601 SMIM1B2RUZ4 78 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms