RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 PDE4DIPQ5VU43 2346 aa2.08□□□□□ -2.08
SNX4-202ENST00000465505 COL27A1Q8IZC6 1860 aaPredicted RBP2.07□□□□□ -2.08
SNX4-202ENST00000465505 A0A087WVE0 104 aa2.07□□□□□ -2.08
SNX4-202ENST00000465505 IGHV1-3A0A0C4DH29 117 aa2.07□□□□□ -2.08
SNX4-202ENST00000465505 A0A0J9YY99 117 aa2.07□□□□□ -2.08
SNX4-202ENST00000465505 C17orf98A8MV24 154 aa2.07□□□□□ -2.08
SNX4-202ENST00000465505 IGKV3-11P04433 115 aa2.07□□□□□ -2.08
SNX4-202ENST00000465505 CNBPP62633 177 aaKnown RBP2.07□□□□□ -2.08
SNX4-202ENST00000465505 KPRPQ5T749 579 aaPredicted RBP2.07□□□□□ -2.08
SNX4-202ENST00000465505 FAM27BQ5VT28 67 aa2.07□□□□□ -2.08
SNX4-202ENST00000465505 LYZL1Q6UWQ5 148 aa2.07□□□□□ -2.08
SNX4-202ENST00000465505 ZNF833PQ6ZTB9 187 aa2.07□□□□□ -2.08
SNX4-202ENST00000465505 LYZL2Q7Z4W2 148 aa2.07□□□□□ -2.08
SNX4-202ENST00000465505 Q86TA4 180 aa2.07□□□□□ -2.08
SNX4-202ENST00000465505 LINC01006Q8NI28 216 aa2.07□□□□□ -2.08
SNX4-202ENST00000465505 CIRBP-AS1Q8TBR5 109 aa2.07□□□□□ -2.08
SNX4-202ENST00000465505 C20orf166-AS1Q96NR2 134 aa2.07□□□□□ -2.08
SNX4-202ENST00000465505 CACNA1CQ13936 2221 aa2.07□□□□□ -2.08
SNX4-202ENST00000465505 SHANK1Q9Y566 2161 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 SDK1Q7Z5N4 2213 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 IGLV11-55A0A075B6I3 123 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 TRAV12-3A0A0B4J271 114 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 A0A0J9YX75 114 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 A0A1W2PNM2 257 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 CLPSL1A2RUU4 121 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 A8MUU9 505 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 D6R8Y8 96 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 HMGN4O00479 90 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 IGLV1-47P01700 117 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 BAALC-AS2P0C853 105 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 TLX1NBP0CAT3 122 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 SPINT3P49223 89 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 C10orf128Q5T292 105 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 SFTA2Q6UW10 78 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 LYPD6Q86Y78 171 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 MUSTN1Q8IVN3 82 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 AMELXQ99217 191 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 WFDC6Q9BQY6 131 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 DEFB126Q9BYW3 111 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 DEC1Q9P2X7 70 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 LENEPQ9Y5L5 61 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 SNURFQ9Y675 71 aa2.06□□□□□ -2.08
SNX4-202ENST00000465505 IGKV1D-37A0A075B6S9 117 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 IGKV3D-7A0A0C4DH55 119 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 A6NED7 52 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 IGIPA6NJ69 53 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 HIGD1CA8MV81 97 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 H7C2G1 150 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 PANO1I0J062 215 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 K7EMI3 77 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 FCER1GP30273 86 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 FXYD6P3P58550 94 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 LYZP61626 148 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 MIR22HGQ0VDD5 57 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 LINC00483Q53H64 154 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 ZCCHC13Q8WW36 166 aaKnown RBP2.05□□□□□ -2.08
SNX4-202ENST00000465505 LINC00846Q9NV44 126 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 LHFPL6Q9Y693 200 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 ICOSQ9Y6W8 199 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 BPTFQ12830 3046 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 TNRC6CQ9HCJ0 1690 aaKnown RBP2.05□□□□□ -2.08
SNX4-202ENST00000465505 UNC13CQ8NB66 2214 aa2.05□□□□□ -2.08
SNX4-202ENST00000465505 IGKV1OR2-108A0A075B7D4 117 aa2.04□□□□□ -2.08
SNX4-202ENST00000465505 TRBV10-1A0A0K0K1A3 114 aa2.04□□□□□ -2.08
SNX4-202ENST00000465505 TRBV6-5A0A0K0K1A5 114 aa2.04□□□□□ -2.08
SNX4-202ENST00000465505 ODF3BA8MYP8 253 aa2.04□□□□□ -2.08
SNX4-202ENST00000465505 H3BPC8 53 aa2.04□□□□□ -2.08
SNX4-202ENST00000465505 SEC16AO15027 2179 aa2.04□□□□□ -2.08
SNX4-202ENST00000465505 DNAL4O96015 105 aa2.04□□□□□ -2.08
SNX4-202ENST00000465505 PRB2P02812 416 aaPredicted RBP2.04□□□□□ -2.08
SNX4-202ENST00000465505 NDPQ00604 133 aa2.04□□□□□ -2.08
SNX4-202ENST00000465505 C1orf137Q5JT78 98 aa2.04□□□□□ -2.08
SNX4-202ENST00000465505 FAM74A4Q5TZK3 123 aa2.04□□□□□ -2.08
SNX4-202ENST00000465505 SPANXA2-OT1Q8N9U9 137 aa2.04□□□□□ -2.08
SNX4-202ENST00000465505 LINC00167Q96N53 147 aa2.04□□□□□ -2.08
SNX4-202ENST00000465505 ANAPC11Q9NYG5 84 aa2.04□□□□□ -2.08
SNX4-202ENST00000465505 LINC01558Q9Y6Z2 57 aa2.04□□□□□ -2.08
SNX4-202ENST00000465505 IGKV1D-42A0A075B6H8 117 aa2.03□□□□□ -2.08
SNX4-202ENST00000465505 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.03□□□□□ -2.08
SNX4-202ENST00000465505 TRBV6-6A0A0A6YYG2 114 aa2.03□□□□□ -2.08
SNX4-202ENST00000465505 TRAV10A0A0B4J240 114 aa2.03□□□□□ -2.08
SNX4-202ENST00000465505 F8VRH5 84 aa2.03□□□□□ -2.08
SNX4-202ENST00000465505 PPP1R17O96001 155 aa2.03□□□□□ -2.08
SNX4-202ENST00000465505 SPANXN5Q5MJ07 72 aa2.03□□□□□ -2.08
SNX4-202ENST00000465505 MIR7-3HGQ8N6C7 128 aa2.03□□□□□ -2.08
SNX4-202ENST00000465505 Q8NAQ8 132 aa2.03□□□□□ -2.08
SNX4-202ENST00000465505 UBALD1Q8TB05 177 aa2.03□□□□□ -2.08
SNX4-202ENST00000465505 IGKV3D-11A0A0A0MRZ8 115 aa2.02□□□□□ -2.09
SNX4-202ENST00000465505 IGHV1-18A0A0C4DH31 117 aa2.02□□□□□ -2.09
SNX4-202ENST00000465505 IL9P15248 144 aa2.02□□□□□ -2.09
SNX4-202ENST00000465505 NREPQ16612 68 aa2.02□□□□□ -2.09
SNX4-202ENST00000465505 Q8TAT8 98 aa2.02□□□□□ -2.09
SNX4-202ENST00000465505 TMEM14CQ9P0S9 112 aa2.02□□□□□ -2.09
SNX4-202ENST00000465505 CADP27708 2225 aa2.01□□□□□ -2.09
SNX4-202ENST00000465505 IGHV3-64DA0A0J9YX35 117 aa2.01□□□□□ -2.09
SNX4-202ENST00000465505 A0A1B0GUT8 65 aa2.01□□□□□ -2.09
SNX4-202ENST00000465505 NDUFB1O75438 58 aa2.01□□□□□ -2.09
SNX4-202ENST00000465505 DEFA4P12838 97 aa2.01□□□□□ -2.09
SNX4-202ENST00000465505 CSAG1Q6PB30 78 aa2.01□□□□□ -2.09
SNX4-202ENST00000465505 PRR15LQ9BU68 103 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms