RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	IGKV1-39	P01597	117 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	IGKV1D-39	P04432	117 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	UBE2D3	P61077	147 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	UBE2D2	P62837	147 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	LCE3E	Q5T5B0	92 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	ATP5L2	Q7Z4Y8	100 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	C5orf38	Q86SI9	138 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	PDPN	Q86YL7	162 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	WFDC9	Q8NEX5	89 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	BRK1	Q8WUW1	75 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	CCL28	Q9NRJ3	127 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	DNAH5	Q8TE73	4624 aa		3.37	□□□□□ -1.87
CACNA1C-223	ENST00000465278	IGHV3OR15-7	A0A075B7D8	119 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278	CEBPZOS	A8MTT3	80 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278	NPY	P01303	97 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278	IGLV1-47	P01700	117 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278	TFF1	P04155	84 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278	IL4	P05112	153 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278	LYPD2	Q6UXB3	125 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278	SDIM1	Q6ZPB5	146 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278	TMEM252	Q8N6L7	170 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278	FAM216B	Q8N7L0	139 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278		Q8N7P7	452 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278	CCL17	Q92583	94 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278	IFI27L1	Q96BM0	104 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278	CCL13	Q99616	98 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278	UPK3B	Q9BT76	320 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278	DYNLRB1	Q9NP97	96 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278	CALY	Q9NYX4	217 aa		3.36	□□□□□ -1.87
CACNA1C-223	ENST00000465278	IGHV1OR15-1	A0A075B7D0	117 aa		3.35	□□□□□ -1.87
CACNA1C-223	ENST00000465278		A0A0G2JRQ6	117 aa		3.35	□□□□□ -1.87
CACNA1C-223	ENST00000465278	TCRBV4S1A1T	A0A5B7	111 aa		3.35	□□□□□ -1.87
CACNA1C-223	ENST00000465278	UBE2L6	O14933	153 aa		3.35	□□□□□ -1.87
CACNA1C-223	ENST00000465278	NDUFC1	O43677	76 aa		3.35	□□□□□ -1.87
CACNA1C-223	ENST00000465278	LGALS3	P17931	250 aa	Known RBP	3.35	□□□□□ -1.87
CACNA1C-223	ENST00000465278	GCHFR	P30047	84 aa		3.35	□□□□□ -1.87
CACNA1C-223	ENST00000465278	FXYD4	P59646	89 aa		3.35	□□□□□ -1.87
CACNA1C-223	ENST00000465278	ZNF726P1	Q15940	193 aa		3.35	□□□□□ -1.87
CACNA1C-223	ENST00000465278		Q6ZQT7	251 aa		3.35	□□□□□ -1.87
CACNA1C-223	ENST00000465278	ZNF833P	Q6ZTB9	187 aa		3.35	□□□□□ -1.87
CACNA1C-223	ENST00000465278	LYZL2	Q7Z4W2	148 aa		3.35	□□□□□ -1.87
CACNA1C-223	ENST00000465278	OR5C1	Q8NGR4	320 aa		3.35	□□□□□ -1.87
CACNA1C-223	ENST00000465278	ZNF714	Q96N38	554 aa		3.35	□□□□□ -1.87
CACNA1C-223	ENST00000465278	RBM12B-AS1	Q9P1G2	102 aa		3.35	□□□□□ -1.87
CACNA1C-223	ENST00000465278	TRBV27	A0A0K0K1C4	114 aa		3.34	□□□□□ -1.87
CACNA1C-223	ENST00000465278	MYMX	A0A1B0GTQ4	84 aa		3.34	□□□□□ -1.87
CACNA1C-223	ENST00000465278		A0A1B0GXF2	115 aa		3.34	□□□□□ -1.87
CACNA1C-223	ENST00000465278	PGP	A6NDG6	321 aa		3.34	□□□□□ -1.87
CACNA1C-223	ENST00000465278	INS-IGF2	F8WCM5	200 aa		3.34	□□□□□ -1.87
CACNA1C-223	ENST00000465278		M0R1W7	72 aa		3.34	□□□□□ -1.87
CACNA1C-223	ENST00000465278	IGKV1-5	P01602	117 aa		3.34	□□□□□ -1.87
CACNA1C-223	ENST00000465278	TCRA	P04437	139 aa		3.34	□□□□□ -1.87
CACNA1C-223	ENST00000465278	IGHV1-8	P0DP01	117 aa		3.34	□□□□□ -1.87
CACNA1C-223	ENST00000465278	EDDM3B	P56851	147 aa		3.34	□□□□□ -1.87
CACNA1C-223	ENST00000465278	SP6	Q3SY56	376 aa		3.34	□□□□□ -1.87
CACNA1C-223	ENST00000465278	ABCA11P	Q4W5N1	156 aa		3.34	□□□□□ -1.87
CACNA1C-223	ENST00000465278	PHF5A	Q7RTV0	110 aa	Known RBP	3.34	□□□□□ -1.87
CACNA1C-223	ENST00000465278	DEFB108B	Q8NET1	73 aa		3.34	□□□□□ -1.87
CACNA1C-223	ENST00000465278	OSTC	Q9NRP0	149 aa		3.34	□□□□□ -1.87
CACNA1C-223	ENST00000465278	LINC00527	Q9UJ94	153 aa		3.34	□□□□□ -1.87
CACNA1C-223	ENST00000465278	TRAV8-1	A0A0A6YYK1	113 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	IGHV7-81	A0A0B4J1V7	117 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	CTXND1	A0A1B0GTU2	59 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	ODF3B	A8MYP8	253 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	C8orf87	E5RJ46	101 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	LYNX1	G3V0Z9	82 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	HBD	P02042	147 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	LYNX1	P0DP58	116 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	CCL3L1	P16619	93 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	ZNF816	Q0VGE8	651 aa	Predicted RBP	3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	FAM104B	Q5XKR9	115 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	HCP5	Q6MZN7	132 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	PCP2	Q8IVA1	136 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	UBALD1	Q8TB05	177 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	ZC2HC1A	Q96GY0	325 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	PGLYRP4	Q96LB8	373 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	DSCR8	Q96T75	97 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	NABP2	Q9BQ15	211 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	NXT2	Q9NPJ8	142 aa	Known RBP	3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	HHLA3	Q9XRX5	114 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	KLK5	Q9Y337	293 aa	Predicted RBP	3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	HILPDA	Q9Y5L2	63 aa		3.33	□□□□□ -1.88
CACNA1C-223	ENST00000465278	IGHV3-43	A0A0B4J1X8	118 aa		3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278		A0A0J9YXY3	114 aa		3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278	SMIM27	A0A1W2PRY6	76 aa		3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278	hADV29S1	A0JD25	119 aa		3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278		H0Y9J4	135 aa		3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278	SLC25A20	O43772	301 aa		3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278	IGLV2-23	P01705	113 aa		3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278	IGHV3-48	P01763	117 aa		3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278	SAA2	P0DJI9	122 aa	Predicted RBP	3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278	IGHV3-43D	P0DP04	118 aa		3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278	FXYD2	P54710	66 aa		3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278	HBB	P68871	147 aa		3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278	C2orf83	Q53S99	150 aa		3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278	CENPW	Q5EE01	88 aa		3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278	MIC13	Q5XKP0	118 aa		3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278	FAM19A2	Q8N3H0	131 aa		3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278	RNF5	Q99942	180 aa		3.32	□□□□□ -1.88
CACNA1C-223	ENST00000465278	NHP2	Q9NX24	153 aa	Known RBP	3.32	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms