RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 AMELXQ99217 191 aa11.6□□□□□ -0.55
CPSF4-209ENST00000465132 PMVKQ15126 192 aa11.59□□□□□ -0.55
CPSF4-209ENST00000465132 PMCHL1Q16048 86 aa11.59□□□□□ -0.55
CPSF4-209ENST00000465132 C14orf177Q52M58 125 aa11.59□□□□□ -0.55
CPSF4-209ENST00000465132 CFAP161Q6P656 301 aa11.59□□□□□ -0.55
CPSF4-209ENST00000465132 CD164L2Q6UWJ8 174 aa11.59□□□□□ -0.55
CPSF4-209ENST00000465132 HERC1Q15751 4861 aa11.59□□□□□ -0.55
CPSF4-209ENST00000465132 IGLV10-54A0A075B6I4 117 aa11.58□□□□□ -0.56
CPSF4-209ENST00000465132 A0A096LNJ9 63 aa11.58□□□□□ -0.56
CPSF4-209ENST00000465132 XGP55808 180 aa11.58□□□□□ -0.56
CPSF4-209ENST00000465132 OPRPNQ99935 248 aaPredicted RBP11.58□□□□□ -0.56
CPSF4-209ENST00000465132 PRSS1P07477 247 aa11.57□□□□□ -0.56
CPSF4-209ENST00000465132 RNASE13Q5GAN3 156 aaKnown RBP11.57□□□□□ -0.56
CPSF4-209ENST00000465132 FAM19A2Q8N3H0 131 aa11.57□□□□□ -0.56
CPSF4-209ENST00000465132 IFI27L1Q96BM0 104 aa11.57□□□□□ -0.56
CPSF4-209ENST00000465132 A0A087WTM6 91 aa11.56□□□□□ -0.56
CPSF4-209ENST00000465132 GAGE12HA6NDE8 117 aa11.56□□□□□ -0.56
CPSF4-209ENST00000465132 XCL1P47992 114 aa11.56□□□□□ -0.56
CPSF4-209ENST00000465132 HERVK_113P63121 156 aa11.56□□□□□ -0.56
CPSF4-209ENST00000465132 BAALCQ8WXS3 180 aa11.56□□□□□ -0.56
CPSF4-209ENST00000465132 APOMO95445 188 aa11.55□□□□□ -0.56
CPSF4-209ENST00000465132 INAFM2P0DMQ5 153 aa11.55□□□□□ -0.56
CPSF4-209ENST00000465132 CST9LQ9H4G1 147 aa11.55□□□□□ -0.56
CPSF4-209ENST00000465132 GEMIN7Q9H840 131 aaKnown RBP11.55□□□□□ -0.56
CPSF4-209ENST00000465132 COX7A2LO14548 114 aa11.54□□□□□ -0.56
CPSF4-209ENST00000465132 MALP21145 153 aa11.54□□□□□ -0.56
CPSF4-209ENST00000465132 UBE2D1P51668 147 aa11.54□□□□□ -0.56
CPSF4-209ENST00000465132 KRTAP10-1P60331 282 aa11.54□□□□□ -0.56
CPSF4-209ENST00000465132 FAM19A3Q7Z5A8 133 aa11.54□□□□□ -0.56
CPSF4-209ENST00000465132 FAM104AQ969W3 186 aa11.54□□□□□ -0.56
CPSF4-209ENST00000465132 MAP1LC3CQ9BXW4 147 aa11.54□□□□□ -0.56
CPSF4-209ENST00000465132 TRAV12-1A0A0B4J245 112 aa11.53□□□□□ -0.56
CPSF4-209ENST00000465132 S100A2P29034 98 aa11.53□□□□□ -0.56
CPSF4-209ENST00000465132 LINC00310P59036 64 aa11.53□□□□□ -0.56
CPSF4-209ENST00000465132 FABP4P15090 132 aa11.52□□□□□ -0.57
CPSF4-209ENST00000465132 Q5VSD8 79 aa11.52□□□□□ -0.57
CPSF4-209ENST00000465132 LINC00173Q6ZV60 143 aa11.52□□□□□ -0.57
CPSF4-209ENST00000465132 TINCRA0A1B0GVN0 87 aa11.51□□□□□ -0.57
CPSF4-209ENST00000465132 NUPR1O60356 82 aa11.51□□□□□ -0.57
CPSF4-209ENST00000465132 FOXI1Q12951 378 aa11.51□□□□□ -0.57
CPSF4-209ENST00000465132 LINC00242Q5T6M2 205 aa11.51□□□□□ -0.57
CPSF4-209ENST00000465132 LINC01561Q8N1V8 128 aa11.51□□□□□ -0.57
CPSF4-209ENST00000465132 FAT1Q14517 4588 aa11.5□□□□□ -0.57
CPSF4-209ENST00000465132 IGHV1-58A0A0C4DH39 117 aa11.5□□□□□ -0.57
CPSF4-209ENST00000465132 H3BRM9 83 aa11.5□□□□□ -0.57
CPSF4-209ENST00000465132 KRTAP26-1Q6PEX3 210 aa11.5□□□□□ -0.57
CPSF4-209ENST00000465132 VPS13BQ7Z7G8 4022 aa11.49□□□□□ -0.57
CPSF4-209ENST00000465132 AKR1D1P51857 326 aa11.49□□□□□ -0.57
CPSF4-209ENST00000465132 CHTOPQ9Y3Y2 248 aaKnown RBP11.49□□□□□ -0.57
CPSF4-209ENST00000465132 IGHV3OR16-9A0A0B4J2B5 98 aa11.48□□□□□ -0.57
CPSF4-209ENST00000465132 USP17L23D6RBM5 183 aa11.48□□□□□ -0.57
CPSF4-209ENST00000465132 GCSHP23434 173 aa11.48□□□□□ -0.57
CPSF4-209ENST00000465132 NTN5Q8WTR8 489 aaPredicted RBP11.48□□□□□ -0.57
CPSF4-209ENST00000465132 DMBT1Q9UGM3 2413 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-209ENST00000465132 A0A087WZ39 114 aa11.47□□□□□ -0.57
CPSF4-209ENST00000465132 A0A0J9YXV3 536 aa11.47□□□□□ -0.57
CPSF4-209ENST00000465132 LRCOL1A6NCL2 159 aa11.47□□□□□ -0.57
CPSF4-209ENST00000465132 F8VRH5 84 aa11.46□□□□□ -0.57
CPSF4-209ENST00000465132 ZNF561-AS1K7EIQ3 104 aa11.46□□□□□ -0.57
CPSF4-209ENST00000465132 IGLC3P0DOY3 106 aa11.46□□□□□ -0.57
CPSF4-209ENST00000465132 ZC2HC1BQ5TFG8 222 aa11.46□□□□□ -0.57
CPSF4-209ENST00000465132 LINC00469Q8N7U9 141 aa11.46□□□□□ -0.57
CPSF4-209ENST00000465132 Q8N814 137 aa11.46□□□□□ -0.57
CPSF4-209ENST00000465132 OR10D4PQ8NGN7 298 aa11.46□□□□□ -0.57
CPSF4-209ENST00000465132 F8WDY8 70 aa11.45□□□□□ -0.58
CPSF4-209ENST00000465132 H0Y8G0 127 aa11.45□□□□□ -0.58
CPSF4-209ENST00000465132 SMR3BP02814 79 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-209ENST00000465132 PLNP26678 52 aa11.45□□□□□ -0.58
CPSF4-209ENST00000465132 C5orf38Q86SI9 138 aa11.45□□□□□ -0.58
CPSF4-209ENST00000465132 CHAC1Q9BUX1 264 aa11.45□□□□□ -0.58
CPSF4-209ENST00000465132 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.44□□□□□ -0.58
CPSF4-209ENST00000465132 hDV102S1A0JD36 115 aa11.44□□□□□ -0.58
CPSF4-209ENST00000465132 C20orf202A1L168 122 aa11.44□□□□□ -0.58
CPSF4-209ENST00000465132 PET117Q6UWS5 81 aa11.44□□□□□ -0.58
CPSF4-209ENST00000465132 IGLV5-45A0A087WSX0 123 aa11.43□□□□□ -0.58
CPSF4-209ENST00000465132 GVQW2A0A096LPI5 108 aaPredicted RBP11.43□□□□□ -0.58
CPSF4-209ENST00000465132 SNRPEP62304 92 aaKnown RBP11.43□□□□□ -0.58
CPSF4-209ENST00000465132 HIST3H2BBQ8N257 126 aa11.43□□□□□ -0.58
CPSF4-209ENST00000465132 PKIGQ9Y2B9 76 aa11.43□□□□□ -0.58
CPSF4-209ENST00000465132 IGHV3-64A0A075B6Q5 118 aa11.42□□□□□ -0.58
CPSF4-209ENST00000465132 SYS1-DBNDD2H3BUS1 97 aa11.42□□□□□ -0.58
CPSF4-209ENST00000465132 LECT2O14960 151 aa11.42□□□□□ -0.58
CPSF4-209ENST00000465132 PRSS2P07478 247 aa11.42□□□□□ -0.58
CPSF4-209ENST00000465132 HAMPP81172 84 aa11.42□□□□□ -0.58
CPSF4-209ENST00000465132 MYCBP2O75592 4640 aa11.41□□□□□ -0.58
CPSF4-209ENST00000465132 IGLV5-52A0A0A0MRZ9 124 aa11.41□□□□□ -0.58
CPSF4-209ENST00000465132 C5orf52A6NGY3 159 aa11.41□□□□□ -0.58
CPSF4-209ENST00000465132 DPM2O94777 84 aa11.41□□□□□ -0.58
CPSF4-209ENST00000465132 COX6A2Q02221 97 aa11.41□□□□□ -0.58
CPSF4-209ENST00000465132 ODF1Q14990 250 aa11.41□□□□□ -0.58
CPSF4-209ENST00000465132 TMEM170BQ5T4T1 132 aa11.41□□□□□ -0.58
CPSF4-209ENST00000465132 ORAOV1Q8WV07 137 aa11.41□□□□□ -0.58
CPSF4-209ENST00000465132 MRPL35Q9NZE8 188 aaKnown RBP11.41□□□□□ -0.58
CPSF4-209ENST00000465132 CDKN2A-AS1Q9UH64 79 aa11.41□□□□□ -0.58
CPSF4-209ENST00000465132 IGLV4-69A0A075B6H9 119 aa11.4□□□□□ -0.58
CPSF4-209ENST00000465132 FAM229AH3BQW9 127 aa11.4□□□□□ -0.58
CPSF4-209ENST00000465132 KRTDAPP60985 99 aa11.4□□□□□ -0.58
CPSF4-209ENST00000465132 C15orf56Q8N910 161 aa11.4□□□□□ -0.58
CPSF4-209ENST00000465132 SPAG11BQ08648 103 aa11.39□□□□□ -0.59
CPSF4-209ENST00000465132 C2orf48Q96LS8 159 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms