RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 MRPL35Q9NZE8 188 aaKnown RBP8.79□□□□□ -1
MCF2L-220ENST00000464800 RAB14P61106 215 aa8.78□□□□□ -1
MCF2L-220ENST00000464800 IFITM2Q01629 132 aa8.78□□□□□ -1
MCF2L-220ENST00000464800 MRPL51Q4U2R6 128 aaKnown RBP8.78□□□□□ -1
MCF2L-220ENST00000464800 FAM104BQ5XKR9 115 aa8.78□□□□□ -1
MCF2L-220ENST00000464800 FAM19A5Q7Z5A7 132 aaPredicted RBP8.78□□□□□ -1
MCF2L-220ENST00000464800 TMEM18Q96B42 140 aa8.78□□□□□ -1
MCF2L-220ENST00000464800 NAT8BQ9UHF3 227 aa8.78□□□□□ -1
MCF2L-220ENST00000464800 F8WDY8 70 aa8.77□□□□□ -1.01
MCF2L-220ENST00000464800 NDUFA1O15239 70 aa8.77□□□□□ -1.01
MCF2L-220ENST00000464800 TMEM241Q24JQ0 296 aa8.77□□□□□ -1.01
MCF2L-220ENST00000464800 ORAOV1Q8WV07 137 aa8.77□□□□□ -1.01
MCF2L-220ENST00000464800 LINC00862A6NCI5 91 aa8.76□□□□□ -1.01
MCF2L-220ENST00000464800 C20orf78Q9BR46 151 aa8.76□□□□□ -1.01
MCF2L-220ENST00000464800 MUC2Q02817 5179 aa8.75□□□□□ -1.01
MCF2L-220ENST00000464800 TRBV24-1A0A075B6N3 115 aa8.75□□□□□ -1.01
MCF2L-220ENST00000464800 TLX1NBP0CAT3 122 aa8.75□□□□□ -1.01
MCF2L-220ENST00000464800 CKS2P33552 79 aa8.75□□□□□ -1.01
MCF2L-220ENST00000464800 RPL23P62829 140 aaKnown RBP8.75□□□□□ -1.01
MCF2L-220ENST00000464800 RPL39P62891 51 aaKnown RBP8.75□□□□□ -1.01
MCF2L-220ENST00000464800 UBE2BP63146 152 aa8.75□□□□□ -1.01
MCF2L-220ENST00000464800 FAM104AQ969W3 186 aa8.75□□□□□ -1.01
MCF2L-220ENST00000464800 SMIM27A0A1W2PRY6 76 aa8.74□□□□□ -1.01
MCF2L-220ENST00000464800 M0QXV9 152 aa8.74□□□□□ -1.01
MCF2L-220ENST00000464800 TCAPO15273 167 aa8.74□□□□□ -1.01
MCF2L-220ENST00000464800 RPL32P62910 135 aaKnown RBP8.74□□□□□ -1.01
MCF2L-220ENST00000464800 GAGE2EQ4V326 116 aa8.74□□□□□ -1.01
MCF2L-220ENST00000464800 FAM74A3Q4VXF1 159 aa8.74□□□□□ -1.01
MCF2L-220ENST00000464800 GAGE2DQ9UEU5 116 aa8.74□□□□□ -1.01
MCF2L-220ENST00000464800 IGHV3OR16-9A0A0B4J2B5 98 aa8.73□□□□□ -1.01
MCF2L-220ENST00000464800 TNFRSF6BO95407 300 aa8.73□□□□□ -1.01
MCF2L-220ENST00000464800 ADIRFQ15847 76 aa8.73□□□□□ -1.01
MCF2L-220ENST00000464800 CLLU1Q5K131 121 aa8.73□□□□□ -1.01
MCF2L-220ENST00000464800 C10orf25Q5T742 122 aa8.73□□□□□ -1.01
MCF2L-220ENST00000464800 SMDT1Q9H4I9 107 aa8.73□□□□□ -1.01
MCF2L-220ENST00000464800 A0A1B0GW15 77 aa8.72□□□□□ -1.01
MCF2L-220ENST00000464800 UNQ6190/PRO20217Q6UXQ8 127 aa8.72□□□□□ -1.01
MCF2L-220ENST00000464800 SPANXA1Q9NS26 97 aa8.72□□□□□ -1.01
MCF2L-220ENST00000464800 C6orf48Q9UBA6 75 aa8.72□□□□□ -1.01
MCF2L-220ENST00000464800 CARHSP1Q9Y2V2 147 aaKnown RBP8.72□□□□□ -1.01
MCF2L-220ENST00000464800 MRPS36P82909 103 aaKnown RBP8.71□□□□□ -1.02
MCF2L-220ENST00000464800 KRTAP7-1Q8IUC3 87 aa8.71□□□□□ -1.02
MCF2L-220ENST00000464800 SMIM2Q9BVW6 85 aa8.71□□□□□ -1.02
MCF2L-220ENST00000464800 NAT8Q9UHE5 227 aa8.71□□□□□ -1.02
MCF2L-220ENST00000464800 C9JQL5 133 aa8.7□□□□□ -1.02
MCF2L-220ENST00000464800 D6R8Y8 96 aa8.7□□□□□ -1.02
MCF2L-220ENST00000464800 HBBP68871 147 aa8.7□□□□□ -1.02
MCF2L-220ENST00000464800 IFITM10A6NMD0 228 aa8.69□□□□□ -1.02
MCF2L-220ENST00000464800 F8W036 122 aa8.69□□□□□ -1.02
MCF2L-220ENST00000464800 LCE2AQ5TA79 106 aaPredicted RBP8.69□□□□□ -1.02
MCF2L-220ENST00000464800 KRTAP9-6A0A140TA67 174 aa8.68□□□□□ -1.02
MCF2L-220ENST00000464800 TSPAN13O95857 204 aa8.68□□□□□ -1.02
MCF2L-220ENST00000464800 NPYP01303 97 aa8.68□□□□□ -1.02
MCF2L-220ENST00000464800 S100A8P05109 93 aa8.68□□□□□ -1.02
MCF2L-220ENST00000464800 MRPL54Q6P161 138 aaKnown RBP8.68□□□□□ -1.02
MCF2L-220ENST00000464800 TGIF2-C20orf24A0A0A6YYL0 155 aa8.67□□□□□ -1.02
MCF2L-220ENST00000464800 SRSF3P84103 164 aaKnown RBP8.67□□□□□ -1.02
MCF2L-220ENST00000464800 PEA15Q15121 130 aa8.67□□□□□ -1.02
MCF2L-220ENST00000464800 TRBV30A0A0K0K1B3 111 aa8.66□□□□□ -1.02
MCF2L-220ENST00000464800 A0A1B0GXF2 115 aa8.66□□□□□ -1.02
MCF2L-220ENST00000464800 NDUFC2-KCTD14E9PQ53 114 aa8.66□□□□□ -1.02
MCF2L-220ENST00000464800 ZNF861PO60384 105 aa8.66□□□□□ -1.02
MCF2L-220ENST00000464800 PPBPP02775 128 aa8.66□□□□□ -1.02
MCF2L-220ENST00000464800 RAB5AP20339 215 aa8.66□□□□□ -1.02
MCF2L-220ENST00000464800 KIAA0087Q14695 138 aa8.66□□□□□ -1.02
MCF2L-220ENST00000464800 IFI27P40305 119 aaPredicted RBP8.65□□□□□ -1.02
MCF2L-220ENST00000464800 C9orf129Q5T035 196 aaKnown RBP8.65□□□□□ -1.02
MCF2L-220ENST00000464800 LINC00242Q5T6M2 205 aa8.65□□□□□ -1.02
MCF2L-220ENST00000464800 TMEM136Q6ZRR5 245 aa8.64□□□□□ -1.03
MCF2L-220ENST00000464800 COMMD7Q86VX2 200 aa8.64□□□□□ -1.03
MCF2L-220ENST00000464800 ORMDL3Q8N138 153 aa8.64□□□□□ -1.03
MCF2L-220ENST00000464800 PACRGQ96M98 296 aaPredicted RBP8.64□□□□□ -1.03
MCF2L-220ENST00000464800 PYGO1Q9Y3Y4 419 aa8.64□□□□□ -1.03
MCF2L-220ENST00000464800 IGLV4-3A0A075B6K6 122 aa8.63□□□□□ -1.03
MCF2L-220ENST00000464800 NUPR1O60356 82 aa8.63□□□□□ -1.03
MCF2L-220ENST00000464800 C2orf82Q6UX34 121 aa8.63□□□□□ -1.03
MCF2L-220ENST00000464800 PRELID3AQ96N28 172 aa8.63□□□□□ -1.03
MCF2L-220ENST00000464800 TMEM141Q96I45 108 aa8.62□□□□□ -1.03
MCF2L-220ENST00000464800 UQCC3Q6UW78 93 aa8.61□□□□□ -1.03
MCF2L-220ENST00000464800 A0A087X002 238 aa8.6□□□□□ -1.03
MCF2L-220ENST00000464800 LOC389332A0A1B0GUA5 103 aa8.6□□□□□ -1.03
MCF2L-220ENST00000464800 TEX43Q6ZNM6 134 aa8.6□□□□□ -1.03
MCF2L-220ENST00000464800 ATP5L2Q7Z4Y8 100 aa8.6□□□□□ -1.03
MCF2L-220ENST00000464800 TYMSOSQ8TAI1 123 aa8.6□□□□□ -1.03
MCF2L-220ENST00000464800 PRSS47A8MTI9 375 aa8.59□□□□□ -1.03
MCF2L-220ENST00000464800 CRYGAP11844 174 aa8.59□□□□□ -1.03
MCF2L-220ENST00000464800 ZC2HC1BQ5TFG8 222 aa8.59□□□□□ -1.03
MCF2L-220ENST00000464800 LINC01561Q8N1V8 128 aa8.59□□□□□ -1.03
MCF2L-220ENST00000464800 CTDSP1Q9GZU7 261 aa8.59□□□□□ -1.03
MCF2L-220ENST00000464800 RPL28P46779 137 aaKnown RBP8.58□□□□□ -1.04
MCF2L-220ENST00000464800 LBHQ53QV2 105 aaPredicted RBP8.58□□□□□ -1.04
MCF2L-220ENST00000464800 C2orf88Q9BSF0 95 aa8.58□□□□□ -1.04
MCF2L-220ENST00000464800 LAMTOR2Q9Y2Q5 125 aa8.58□□□□□ -1.04
MCF2L-220ENST00000464800 C22orf24Q9Y442 160 aa8.58□□□□□ -1.04
MCF2L-220ENST00000464800 PRSS2P07478 247 aa8.57□□□□□ -1.04
MCF2L-220ENST00000464800 C2orf66Q6UXQ4 117 aa8.57□□□□□ -1.04
MCF2L-220ENST00000464800 Q6ZN92 141 aa8.57□□□□□ -1.04
MCF2L-220ENST00000464800 LINC00469Q8N7U9 141 aa8.57□□□□□ -1.04
MCF2L-220ENST00000464800 MAP1LC3AQ9H492 121 aa8.57□□□□□ -1.04
MCF2L-220ENST00000464800 CYSLTR1Q9Y271 337 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms