RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 SSSCA1O60232 199 aa-0.88□□□□□ -2.55
PTPN12-210ENST00000464313 IFNGP01579 166 aa-0.88□□□□□ -2.55
PTPN12-210ENST00000464313 DEFB123Q8N688 67 aa-0.88□□□□□ -2.55
PTPN12-210ENST00000464313 BTAF1O14981 1849 aa-0.88□□□□□ -2.55
PTPN12-210ENST00000464313 RYR1P21817 5038 aa-0.88□□□□□ -2.55
PTPN12-210ENST00000464313 HYDINQ4G0P3 5121 aa-0.89□□□□□ -2.55
PTPN12-210ENST00000464313 NSD3Q9BZ95 1437 aa-0.89□□□□□ -2.55
PTPN12-210ENST00000464313 SETD2Q9BYW2 2564 aaPredicted RBP-0.89□□□□□ -2.55
PTPN12-210ENST00000464313 SPTA1P02549 2419 aa-0.89□□□□□ -2.55
PTPN12-210ENST00000464313 OOSP1A8MZH6 123 aa-0.89□□□□□ -2.55
PTPN12-210ENST00000464313 FGF7P21781 194 aa-0.89□□□□□ -2.55
PTPN12-210ENST00000464313 MT4P47944 62 aa-0.89□□□□□ -2.55
PTPN12-210ENST00000464313 TSC22D3Q99576 134 aa-0.89□□□□□ -2.55
PTPN12-210ENST00000464313 FXYD6Q9H0Q3 95 aa-0.89□□□□□ -2.55
PTPN12-210ENST00000464313 POLA1P09884 1462 aaPredicted RBP-0.89□□□□□ -2.55
PTPN12-210ENST00000464313 K7EP13 123 aa-0.9□□□□□ -2.55
PTPN12-210ENST00000464313 MYOZ3Q8TDC0 251 aa-0.9□□□□□ -2.55
PTPN12-210ENST00000464313 TMEM263Q8WUH6 116 aaKnown RBP-0.9□□□□□ -2.55
PTPN12-210ENST00000464313 ARHGEF12Q9NZN5 1544 aa-0.9□□□□□ -2.55
PTPN12-210ENST00000464313 NAIPQ13075 1403 aa-0.9□□□□□ -2.55
PTPN12-210ENST00000464313 ROBO1Q9Y6N7 1651 aa-0.91□□□□□ -2.55
PTPN12-210ENST00000464313 EP300Q09472 2414 aaPredicted RBP-0.91□□□□□ -2.56
PTPN12-210ENST00000464313 MGPP08493 103 aa-0.91□□□□□ -2.56
PTPN12-210ENST00000464313 IGLC1P0CG04 106 aa-0.91□□□□□ -2.56
PTPN12-210ENST00000464313 ACANP16112 2415 aa-0.91□□□□□ -2.56
PTPN12-210ENST00000464313 RAPGEF6Q8TEU7 1601 aa-0.92□□□□□ -2.56
PTPN12-210ENST00000464313 S100A12P80511 92 aa-0.92□□□□□ -2.56
PTPN12-210ENST00000464313 C10orf113Q5VZT2 155 aa-0.92□□□□□ -2.56
PTPN12-210ENST00000464313 SPRR4Q96PI1 79 aa-0.92□□□□□ -2.56
PTPN12-210ENST00000464313 NXT2Q9NPJ8 142 aaKnown RBP-0.92□□□□□ -2.56
PTPN12-210ENST00000464313 FLNBO75369 2602 aaKnown RBP-0.92□□□□□ -2.56
PTPN12-210ENST00000464313 AKAIN1P0CW23 69 aa-0.93□□□□□ -2.56
PTPN12-210ENST00000464313 UBA52P62987 128 aaKnown RBP-0.93□□□□□ -2.56
PTPN12-210ENST00000464313 KLK9Q2XQG4 91 aa-0.93□□□□□ -2.56
PTPN12-210ENST00000464313 KRTAP19-8Q3LI54 63 aa-0.93□□□□□ -2.56
PTPN12-210ENST00000464313 CDC42SE2Q9NRR3 84 aa-0.93□□□□□ -2.56
PTPN12-210ENST00000464313 FAIMQ9NVQ4 179 aa-0.93□□□□□ -2.56
PTPN12-210ENST00000464313 CHD8Q9HCK8 2581 aa-0.93□□□□□ -2.56
PTPN12-210ENST00000464313 KDM5AP29375 1690 aaKnown RBP-0.94□□□□□ -2.56
PTPN12-210ENST00000464313 MYOM1P52179 1685 aa-0.94□□□□□ -2.56
PTPN12-210ENST00000464313 ARL2-SNX15V9GYD0 113 aa-0.94□□□□□ -2.56
PTPN12-210ENST00000464313 ARHGEF5Q12774 1597 aa-0.95□□□□□ -2.56
PTPN12-210ENST00000464313 LINC00959A0A1B0GUT2 108 aa-0.95□□□□□ -2.56
PTPN12-210ENST00000464313 SPINK4O60575 86 aa-0.95□□□□□ -2.56
PTPN12-210ENST00000464313 FAM223AQ8IWN6 122 aa-0.95□□□□□ -2.56
PTPN12-210ENST00000464313 PP6455Q8WZ26 134 aa-0.95□□□□□ -2.56
PTPN12-210ENST00000464313 GAPVD1Q14C86 1478 aa-0.95□□□□□ -2.56
PTPN12-210ENST00000464313 MAP1AP78559 2803 aaPredicted RBP-0.95□□□□□ -2.56
PTPN12-210ENST00000464313 LAMA5O15230 3695 aa-0.95□□□□□ -2.56
PTPN12-210ENST00000464313 SHROOM2Q13796 1616 aa-0.96□□□□□ -2.56
PTPN12-210ENST00000464313 TRBV7-4A0A0J9YYF1 115 aa-0.96□□□□□ -2.56
PTPN12-210ENST00000464313 HMGN1P05114 100 aa-0.96□□□□□ -2.56
PTPN12-210ENST00000464313 C9orf153Q5TBE3 101 aa-0.96□□□□□ -2.56
PTPN12-210ENST00000464313 FDCSPQ8NFU4 85 aa-0.96□□□□□ -2.56
PTPN12-210ENST00000464313 UQCR10Q9UDW1 63 aa-0.96□□□□□ -2.56
PTPN12-210ENST00000464313 URB1O60287 2271 aaKnown RBP-0.96□□□□□ -2.56
PTPN12-210ENST00000464313 QRICH2Q9H0J4 1663 aa-0.97□□□□□ -2.56
PTPN12-210ENST00000464313 LRP1BQ9NZR2 4599 aa-0.97□□□□□ -2.56
PTPN12-210ENST00000464313 TULP4Q9NRJ4 1543 aa-0.97□□□□□ -2.56
PTPN12-210ENST00000464313 DEFB105AQ8NG35 78 aa-0.97□□□□□ -2.56
PTPN12-210ENST00000464313 EPPK1P58107 5090 aaKnown RBP-0.97□□□□□ -2.57
PTPN12-210ENST00000464313 ZFHX3Q15911 3703 aa-0.98□□□□□ -2.57
PTPN12-210ENST00000464313 UBE2L5PA0A1B0GUS4 154 aa-0.98□□□□□ -2.57
PTPN12-210ENST00000464313 UBE2L3P68036 154 aaKnown RBP-0.98□□□□□ -2.57
PTPN12-210ENST00000464313 DPH3P1Q9H4G8 78 aa-0.98□□□□□ -2.57
PTPN12-210ENST00000464313 TCHHQ07283 1943 aa-0.98□□□□□ -2.57
PTPN12-210ENST00000464313 KTN1Q86UP2 1357 aaKnown RBP-0.98□□□□□ -2.57
PTPN12-210ENST00000464313 SMG6Q86US8 1419 aaKnown RBP-0.98□□□□□ -2.57
PTPN12-210ENST00000464313 STARD9Q9P2P6 4700 aa-0.98□□□□□ -2.57
PTPN12-210ENST00000464313 TEP1Q99973 2627 aaKnown RBP-0.99□□□□□ -2.57
PTPN12-210ENST00000464313 GNG11P61952 73 aa-0.99□□□□□ -2.57
PTPN12-210ENST00000464313 WHAMMP3Q1A5X7 153 aa-0.99□□□□□ -2.57
PTPN12-210ENST00000464313 SFTA2Q6UW10 78 aa-0.99□□□□□ -2.57
PTPN12-210ENST00000464313 C1orf54Q8WWF1 131 aa-0.99□□□□□ -2.57
PTPN12-210ENST00000464313 LINC01600Q96MT4 127 aa-0.99□□□□□ -2.57
PTPN12-210ENST00000464313 NBEAL1Q6ZS30 2694 aa-0.99□□□□□ -2.57
PTPN12-210ENST00000464313 ROCK2O75116 1388 aaKnown RBP-0.99□□□□□ -2.57
PTPN12-210ENST00000464313 HMGXB3Q12766 1538 aa-0.99□□□□□ -2.57
PTPN12-210ENST00000464313 PRKDCP78527 4128 aaKnown RBP-1□□□□□ -2.57
PTPN12-210ENST00000464313 TET3O43151 1660 aa-1□□□□□ -2.57
PTPN12-210ENST00000464313 SNAPC5O75971 98 aa-1□□□□□ -2.57
PTPN12-210ENST00000464313 LCN9Q8WX39 176 aa-1□□□□□ -2.57
PTPN12-210ENST00000464313 A2ML1A8K2U0 1454 aa-1□□□□□ -2.57
PTPN12-210ENST00000464313 STAB2Q8WWQ8 2551 aa-1.01□□□□□ -2.57
PTPN12-210ENST00000464313 M0R2T5 61 aa-1.01□□□□□ -2.57
PTPN12-210ENST00000464313 MANBALQ9NQG1 85 aa-1.01□□□□□ -2.57
PTPN12-210ENST00000464313 MAGI1Q96QZ7 1491 aaPredicted RBP-1.01□□□□□ -2.57
PTPN12-210ENST00000464313 FAM167A-AS1Q96KT0 104 aa-1.02□□□□□ -2.57
PTPN12-210ENST00000464313 CNOT1A5YKK6 2376 aaKnown RBP-1.03□□□□□ -2.57
PTPN12-210ENST00000464313 DNAJC13O75165 2243 aa-1.03□□□□□ -2.57
PTPN12-210ENST00000464313 FAM24AA6NFZ4 105 aa-1.03□□□□□ -2.57
PTPN12-210ENST00000464313 Q0VG73 95 aa-1.03□□□□□ -2.57
PTPN12-210ENST00000464313 SONP18583 2426 aaKnown RBP-1.04□□□□□ -2.58
PTPN12-210ENST00000464313 SYS1-DBNDD2H3BUS1 97 aa-1.04□□□□□ -2.58
PTPN12-210ENST00000464313 SCAPERQ9BY12 1400 aa-1.05□□□□□ -2.58
PTPN12-210ENST00000464313 RNF213Q63HN8 5207 aa-1.05□□□□□ -2.58
PTPN12-210ENST00000464313 CUL7Q14999 1698 aa-1.06□□□□□ -2.58
PTPN12-210ENST00000464313 FAM223BA6NKX1 122 aa-1.06□□□□□ -2.58
PTPN12-210ENST00000464313 F6UZH7 168 aa-1.06□□□□□ -2.58
PTPN12-210ENST00000464313 PRO1933Q9H354 126 aa-1.06□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms